RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 SPRR2AP35326 72 aa4.36□□□□□ -1.71
SCFD1-215ENST00000555259 C8orf87E5RJ46 101 aa4.35□□□□□ -1.71
SCFD1-215ENST00000555259 H1FX-AS1Q4G0G2 97 aa4.35□□□□□ -1.71
SCFD1-215ENST00000555259 KRTAP19-8Q3LI54 63 aa4.34□□□□□ -1.71
SCFD1-215ENST00000555259 TRBV7-4A0A0J9YYF1 115 aa4.33□□□□□ -1.72
SCFD1-215ENST00000555259 A0A1B0GVX0 72 aa4.33□□□□□ -1.72
SCFD1-215ENST00000555259 RAB37Q96AX2 223 aa4.33□□□□□ -1.72
SCFD1-215ENST00000555259 ATOH7Q8N100 152 aa4.32□□□□□ -1.72
SCFD1-215ENST00000555259 SPRR2FQ96RM1 72 aa4.32□□□□□ -1.72
SCFD1-215ENST00000555259 KRTDAPP60985 99 aa4.31□□□□□ -1.72
SCFD1-215ENST00000555259 SNCGO76070 127 aa4.31□□□□□ -1.72
SCFD1-215ENST00000555259 FABP2P12104 132 aa4.31□□□□□ -1.72
SCFD1-215ENST00000555259 SPRR2GQ9BYE4 73 aa4.3□□□□□ -1.72
SCFD1-215ENST00000555259 ANKRD29Q8N6D5 301 aa4.29□□□□□ -1.72
SCFD1-215ENST00000555259 HIST1H2BKO60814 126 aa4.28□□□□□ -1.72
SCFD1-215ENST00000555259 HIST1H2BJP06899 126 aa4.28□□□□□ -1.72
SCFD1-215ENST00000555259 HIST1H2BOP23527 126 aa4.28□□□□□ -1.72
SCFD1-215ENST00000555259 HIST1H2BBP33778 126 aa4.28□□□□□ -1.72
SCFD1-215ENST00000555259 HIST1H2BDP58876 126 aa4.28□□□□□ -1.72
SCFD1-215ENST00000555259 HIST1H2BCP62807 126 aa4.28□□□□□ -1.72
SCFD1-215ENST00000555259 HIST2H2BEQ16778 126 aa4.28□□□□□ -1.72
SCFD1-215ENST00000555259 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-215ENST00000555259 HIST1H2BHQ93079 126 aa4.28□□□□□ -1.72
SCFD1-215ENST00000555259 HIST1H2BNQ99877 126 aa4.28□□□□□ -1.72
SCFD1-215ENST00000555259 HIST1H2BMQ99879 126 aa4.28□□□□□ -1.72
SCFD1-215ENST00000555259 FAM236AA0A1B0GUQ0 79 aa4.27□□□□□ -1.73
SCFD1-215ENST00000555259 FAM236BA0A1B0GV22 79 aa4.27□□□□□ -1.73
SCFD1-215ENST00000555259 LYRM7Q5U5X0 104 aa4.27□□□□□ -1.73
SCFD1-215ENST00000555259 H0YGX0 51 aa4.27□□□□□ -1.73
SCFD1-215ENST00000555259 A0A1B0GV72 72 aa4.26□□□□□ -1.73
SCFD1-215ENST00000555259 TRACP01848 142 aa4.26□□□□□ -1.73
SCFD1-215ENST00000555259 CCKP06307 115 aa4.25□□□□□ -1.73
SCFD1-215ENST00000555259 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
SCFD1-215ENST00000555259 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
SCFD1-215ENST00000555259 DSCR8Q96T75 97 aa4.25□□□□□ -1.73
SCFD1-215ENST00000555259 IGKV3D-7A0A0C4DH55 119 aa4.24□□□□□ -1.73
SCFD1-215ENST00000555259 IMUPQ9GZP8 106 aa4.23□□□□□ -1.73
SCFD1-215ENST00000555259 A0A1B0GX51 115 aa4.23□□□□□ -1.73
SCFD1-215ENST00000555259 SNRPEP62304 92 aaKnown RBP4.23□□□□□ -1.73
SCFD1-215ENST00000555259 SPRR2DP22532 72 aa4.21□□□□□ -1.74
SCFD1-215ENST00000555259 HIST1H4GQ99525 98 aa4.21□□□□□ -1.74
SCFD1-215ENST00000555259 C9orf118A6NHY6 69 aa4.2□□□□□ -1.74
SCFD1-215ENST00000555259 J3KT08 172 aa4.2□□□□□ -1.74
SCFD1-215ENST00000555259 C5orf47Q569G3 176 aa4.2□□□□□ -1.74
SCFD1-215ENST00000555259 COA6Q5JTJ3 125 aaKnown RBP4.19□□□□□ -1.74
SCFD1-215ENST00000555259 C8orf17Q9NRJ1 99 aa4.19□□□□□ -1.74
SCFD1-215ENST00000555259 NDUFB1O75438 58 aa4.18□□□□□ -1.74
SCFD1-215ENST00000555259 VPS25Q9BRG1 176 aa4.18□□□□□ -1.74
SCFD1-215ENST00000555259 A0A0B4J2C4 111 aa4.16□□□□□ -1.74
SCFD1-215ENST00000555259 Q6ZVQ6 151 aa4.16□□□□□ -1.74
SCFD1-215ENST00000555259 ORMDL1Q9P0S3 153 aa4.16□□□□□ -1.74
SCFD1-215ENST00000555259 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
SCFD1-215ENST00000555259 KRTAP8-1Q8IUC2 63 aa4.15□□□□□ -1.74
SCFD1-215ENST00000555259 HSBP1L1C9JCN9 74 aa4.14□□□□□ -1.75
SCFD1-215ENST00000555259 H3BQ85 93 aa4.14□□□□□ -1.75
SCFD1-215ENST00000555259 TMEM256-PLSCR3K7ERE1 68 aa4.14□□□□□ -1.75
SCFD1-215ENST00000555259 DNAL4O96015 105 aa4.14□□□□□ -1.75
SCFD1-215ENST00000555259 KLKP1Q107X0 134 aa4.14□□□□□ -1.75
SCFD1-215ENST00000555259 IGKV2D-30A0A075B6S6 120 aa4.13□□□□□ -1.75
SCFD1-215ENST00000555259 IGKV2-30P06310 120 aa4.13□□□□□ -1.75
SCFD1-215ENST00000555259 C2orf91Q6ZV80 131 aa4.13□□□□□ -1.75
SCFD1-215ENST00000555259 TRIAP1O43715 76 aa4.11□□□□□ -1.75
SCFD1-215ENST00000555259 C4orf26Q17RF5 130 aa4.11□□□□□ -1.75
SCFD1-215ENST00000555259 CSAG1Q6PB30 78 aa4.11□□□□□ -1.75
SCFD1-215ENST00000555259 Q6ZQT0 140 aa4.11□□□□□ -1.75
SCFD1-215ENST00000555259 C7orf65Q6ZTY9 151 aa4.11□□□□□ -1.75
SCFD1-215ENST00000555259 UBE2V1Q13404 147 aa4.1□□□□□ -1.75
SCFD1-215ENST00000555259 MRPL34Q9BQ48 92 aaKnown RBP4.1□□□□□ -1.75
SCFD1-215ENST00000555259 PRO1854Q9UHT4 67 aa4.1□□□□□ -1.75
SCFD1-215ENST00000555259 RBM3P98179 157 aaKnown RBP4.09□□□□□ -1.75
SCFD1-215ENST00000555259 COX8AP10176 69 aa4.08□□□□□ -1.76
SCFD1-215ENST00000555259 TMEM254Q8TBM7 123 aa4.08□□□□□ -1.76
SCFD1-215ENST00000555259 S4R3F8 94 aa4.08□□□□□ -1.76
SCFD1-215ENST00000555259 KRTAP3-1Q9BYR8 98 aa4.07□□□□□ -1.76
SCFD1-215ENST00000555259 MMP24-AS1A0A0U1RRL7 71 aa4.06□□□□□ -1.76
SCFD1-215ENST00000555259 NDUFS5O43920 106 aa4.06□□□□□ -1.76
SCFD1-215ENST00000555259 Q5W150 140 aa4.06□□□□□ -1.76
SCFD1-215ENST00000555259 LCA10Q71F78 164 aa4.06□□□□□ -1.76
SCFD1-215ENST00000555259 PRR15Q8IV56 129 aa4.06□□□□□ -1.76
SCFD1-215ENST00000555259 DLEU1O43261 78 aa4.06□□□□□ -1.76
SCFD1-215ENST00000555259 PRO2289Q9P1D8 64 aa4.06□□□□□ -1.76
SCFD1-215ENST00000555259 C9JAW5 83 aa4.05□□□□□ -1.76
SCFD1-215ENST00000555259 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
SCFD1-215ENST00000555259 MT1XP80297 61 aa4.04□□□□□ -1.76
SCFD1-215ENST00000555259 CEND1Q8N111 149 aa4.03□□□□□ -1.76
SCFD1-215ENST00000555259 HIGD1BQ9P298 99 aa4.03□□□□□ -1.76
SCFD1-215ENST00000555259 hDV103S1A0JD37 113 aa4.02□□□□□ -1.77
SCFD1-215ENST00000555259 KRTAP12-2P59991 146 aa4.02□□□□□ -1.77
SCFD1-215ENST00000555259 HIST1H2BLQ99880 126 aa4.02□□□□□ -1.77
SCFD1-215ENST00000555259 PSMB2P49721 201 aa4.02□□□□□ -1.77
SCFD1-215ENST00000555259 HIST3H2BBQ8N257 126 aa4.02□□□□□ -1.77
SCFD1-215ENST00000555259 C14orf144Q96I85 54 aa4.01□□□□□ -1.77
SCFD1-215ENST00000555259 FXYD2P54710 66 aa4□□□□□ -1.77
SCFD1-215ENST00000555259 COX6CP09669 75 aa3.99□□□□□ -1.77
SCFD1-215ENST00000555259 A0A1B0GW54 56 aa3.98□□□□□ -1.77
SCFD1-215ENST00000555259 K7EQZ3 153 aa3.98□□□□□ -1.77
SCFD1-215ENST00000555259 S100A2P29034 98 aa3.98□□□□□ -1.77
SCFD1-215ENST00000555259 C1orf64Q8NEQ6 169 aa3.97□□□□□ -1.77
SCFD1-215ENST00000555259 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
SCFD1-215ENST00000555259 K7ERJ3 54 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 883.1 ms