RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 H3BPC8 53 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 I3L3M4 83 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 PPP1R17O96001 155 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 COX6A2Q02221 97 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 ATP5EP2Q5VTU8 51 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 C16orf74Q96GX8 76 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 KIF25-AS1Q9Y6Z4 181 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 A0A1W2PNM2 257 aa1.69□□□□□ -2.14
PRPF39-206ENST00000554429 CCL18P55774 89 aa1.69□□□□□ -2.14
PRPF39-206ENST00000554429 TMEM263Q8WUH6 116 aaKnown RBP1.69□□□□□ -2.14
PRPF39-206ENST00000554429 AMELXQ99217 191 aa1.69□□□□□ -2.14
PRPF39-206ENST00000554429 C14orf132Q9NPU4 83 aa1.69□□□□□ -2.14
PRPF39-206ENST00000554429 TRBV30A0A0K0K1B3 111 aa1.69□□□□□ -2.14
PRPF39-206ENST00000554429 LOC101927531A0A1B0GV80 90 aa1.69□□□□□ -2.14
PRPF39-206ENST00000554429 H3BQ85 93 aa1.69□□□□□ -2.14
PRPF39-206ENST00000554429 NCR3O14931 201 aa1.69□□□□□ -2.14
PRPF39-206ENST00000554429 ERC2-IT1O76042 136 aa1.69□□□□□ -2.14
PRPF39-206ENST00000554429 LINC00315P59091 139 aa1.69□□□□□ -2.14
PRPF39-206ENST00000554429 ENHOQ6UWT2 76 aa1.69□□□□□ -2.14
PRPF39-206ENST00000554429 RPL36ALQ969Q0 106 aaKnown RBP1.69□□□□□ -2.14
PRPF39-206ENST00000554429 MYCBP2O75592 4640 aa1.69□□□□□ -2.14
PRPF39-206ENST00000554429 SRRM2Q9UQ35 2752 aaKnown RBP1.69□□□□□ -2.14
PRPF39-206ENST00000554429 IGLV7-46A0A075B6I9 117 aa1.68□□□□□ -2.14
PRPF39-206ENST00000554429 M0QY20 66 aa1.68□□□□□ -2.14
PRPF39-206ENST00000554429 M0R2N4 97 aa1.68□□□□□ -2.14
PRPF39-206ENST00000554429 SPAG11BQ08648 103 aa1.68□□□□□ -2.14
PRPF39-206ENST00000554429 SPAG11AQ6PDA7 123 aa1.68□□□□□ -2.14
PRPF39-206ENST00000554429 Q6ZSA8 131 aa1.68□□□□□ -2.14
PRPF39-206ENST00000554429 Q8N377 158 aa1.68□□□□□ -2.14
PRPF39-206ENST00000554429 CNFNQ9BYD5 112 aa1.68□□□□□ -2.14
PRPF39-206ENST00000554429 LINC00846Q9NV44 126 aa1.68□□□□□ -2.14
PRPF39-206ENST00000554429 ORMDL1Q9P0S3 153 aa1.68□□□□□ -2.14
PRPF39-206ENST00000554429 IGLV10-54A0A075B6I4 117 aa1.68□□□□□ -2.14
PRPF39-206ENST00000554429 TRGV1A0A0A0MS02 117 aa1.68□□□□□ -2.14
PRPF39-206ENST00000554429 POLR2KP53803 58 aaKnown RBP1.68□□□□□ -2.14
PRPF39-206ENST00000554429 Q5VSD8 79 aa1.68□□□□□ -2.14
PRPF39-206ENST00000554429 A0A087WYN8 130 aa1.67□□□□□ -2.14
PRPF39-206ENST00000554429 TRBV6-5A0A0K0K1A5 114 aa1.67□□□□□ -2.14
PRPF39-206ENST00000554429 TRBV6-1A0A0K0K1D8 114 aa1.67□□□□□ -2.14
PRPF39-206ENST00000554429 PANO1I0J062 215 aa1.67□□□□□ -2.14
PRPF39-206ENST00000554429 LINC00158P58513 81 aa1.67□□□□□ -2.14
PRPF39-206ENST00000554429 KRTAP10-4P60372 401 aaPredicted RBP1.67□□□□□ -2.14
PRPF39-206ENST00000554429 NREPQ16612 68 aa1.67□□□□□ -2.14
PRPF39-206ENST00000554429 A0A087WTM6 91 aa1.67□□□□□ -2.14
PRPF39-206ENST00000554429 DEFB130BP0DP73 79 aa1.67□□□□□ -2.14
PRPF39-206ENST00000554429 DEFB130AP0DP74 79 aa1.67□□□□□ -2.14
PRPF39-206ENST00000554429 KRTAP10-1P60331 282 aa1.67□□□□□ -2.14
PRPF39-206ENST00000554429 Q6ZTI0 123 aa1.67□□□□□ -2.14
PRPF39-206ENST00000554429 LITAFQ99732 161 aa1.67□□□□□ -2.14
PRPF39-206ENST00000554429 C22orf24Q9Y442 160 aa1.67□□□□□ -2.14
PRPF39-206ENST00000554429 KLK12Q9UKR0 248 aa1.66□□□□□ -2.14
PRPF39-206ENST00000554429 LINC00308Q8TCZ7 52 aa1.66□□□□□ -2.14
PRPF39-206ENST00000554429 NOP10Q9NPE3 64 aaKnown RBP1.66□□□□□ -2.14
PRPF39-206ENST00000554429 TRGV2A0A075B6R0 118 aa1.65□□□□□ -2.14
PRPF39-206ENST00000554429 HTN3P15516 51 aa1.65□□□□□ -2.14
PRPF39-206ENST00000554429 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.65□□□□□ -2.14
PRPF39-206ENST00000554429 Q8N9L7 120 aa1.65□□□□□ -2.14
PRPF39-206ENST00000554429 FAT1Q14517 4588 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 HMCN2Q8NDA2 5059 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 TRBV10-1A0A0K0K1A3 114 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 LINC01546A6NGU7 62 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 SPINK7P58062 85 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 KRTAP25-1Q3LHN0 102 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 C9orf163Q8N9P6 203 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 HIGD2AQ9BW72 106 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 IGLV4-60A0A075B6I1 120 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 A0A087WSZ3 146 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 HAMPP81172 84 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 KRTAP15-1Q3LI76 137 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 LINC01556Q5JQF7 62 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 TYMSOSQ8TAI1 123 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 LENEPQ9Y5L5 61 aa1.65□□□□□ -2.15
PRPF39-206ENST00000554429 LCE1AQ5T7P2 110 aa1.64□□□□□ -2.15
PRPF39-206ENST00000554429 SMIM11BQ8TCY0 68 aa1.64□□□□□ -2.15
PRPF39-206ENST00000554429 PRO0255Q9UI72 69 aa1.64□□□□□ -2.15
PRPF39-206ENST00000554429 DEFB116Q30KQ4 102 aa1.64□□□□□ -2.15
PRPF39-206ENST00000554429 KRTAP26-1Q6PEX3 210 aa1.64□□□□□ -2.15
PRPF39-206ENST00000554429 IGKV2-28A0A075B6P5 120 aa1.63□□□□□ -2.15
PRPF39-206ENST00000554429 IGKV2D-28P01615 120 aa1.63□□□□□ -2.15
PRPF39-206ENST00000554429 PRR34Q9NV39 138 aa1.63□□□□□ -2.15
PRPF39-206ENST00000554429 TNXBP22105 4242 aa1.63□□□□□ -2.15
PRPF39-206ENST00000554429 DMBT1Q9UGM3 2413 aaPredicted RBP1.63□□□□□ -2.15
PRPF39-206ENST00000554429 TRGV4A0A0C4DH28 118 aa1.63□□□□□ -2.15
PRPF39-206ENST00000554429 ELOF1P60002 83 aaKnown RBP1.63□□□□□ -2.15
PRPF39-206ENST00000554429 COX7B2Q8TF08 81 aa1.63□□□□□ -2.15
PRPF39-206ENST00000554429 UBL5Q9BZL1 73 aa1.63□□□□□ -2.15
PRPF39-206ENST00000554429 SPINT4Q6UDR6 99 aa1.62□□□□□ -2.15
PRPF39-206ENST00000554429 A0A0G2JQZ4 141 aa1.62□□□□□ -2.15
PRPF39-206ENST00000554429 TRBV6-4A0A1B0GX49 114 aa1.62□□□□□ -2.15
PRPF39-206ENST00000554429 A0A1W2PNN7 141 aa1.62□□□□□ -2.15
PRPF39-206ENST00000554429 LELP1Q5T871 98 aa1.62□□□□□ -2.15
PRPF39-206ENST00000554429 DEFB105AQ8NG35 78 aa1.62□□□□□ -2.15
PRPF39-206ENST00000554429 LINC00208Q96KT6 92 aa1.62□□□□□ -2.15
PRPF39-206ENST00000554429 LINC01558Q9Y6Z2 57 aa1.62□□□□□ -2.15
PRPF39-206ENST00000554429 NDUFA1O15239 70 aa1.62□□□□□ -2.15
PRPF39-206ENST00000554429 IGLV7-43P04211 117 aa1.62□□□□□ -2.15
PRPF39-206ENST00000554429 MT1HL1P0DM35 61 aa1.62□□□□□ -2.15
PRPF39-206ENST00000554429 C1orf137Q5JT78 98 aa1.61□□□□□ -2.15
PRPF39-206ENST00000554429 SPANXA2-OT1Q8N9U9 137 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms