RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 IGKV2-29A2NJV5 120 aaPredicted RBP2.67□□□□□ -1.98
ATXN3-225ENST00000554214 H0Y9P7 68 aa2.67□□□□□ -1.98
ATXN3-225ENST00000554214 H3BRN7 92 aa2.67□□□□□ -1.98
ATXN3-225ENST00000554214 NDUFA4O00483 81 aa2.67□□□□□ -1.98
ATXN3-225ENST00000554214 POLR2KP53803 58 aaKnown RBP2.67□□□□□ -1.98
ATXN3-225ENST00000554214 NTM-AS1Q6ZSK4 140 aa2.67□□□□□ -1.98
ATXN3-225ENST00000554214 Q8NDZ9 215 aa2.67□□□□□ -1.98
ATXN3-225ENST00000554214 PLAC8Q9NZF1 115 aa2.67□□□□□ -1.98
ATXN3-225ENST00000554214 DYNC1H1Q14204 4646 aaKnown RBP2.67□□□□□ -1.98
ATXN3-225ENST00000554214 TNCP24821 2201 aa2.66□□□□□ -1.98
ATXN3-225ENST00000554214 IGLV10-54A0A075B6I4 117 aa2.66□□□□□ -1.98
ATXN3-225ENST00000554214 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.66□□□□□ -1.98
ATXN3-225ENST00000554214 IGHV7-4-1A0A0J9YVY3 117 aa2.66□□□□□ -1.98
ATXN3-225ENST00000554214 M0R2N4 97 aa2.66□□□□□ -1.98
ATXN3-225ENST00000554214 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
ATXN3-225ENST00000554214 Q8NAQ8 132 aa2.66□□□□□ -1.98
ATXN3-225ENST00000554214 SMIM11BQ8TCY0 68 aa2.66□□□□□ -1.98
ATXN3-225ENST00000554214 CHCHD7Q9BUK0 85 aa2.66□□□□□ -1.98
ATXN3-225ENST00000554214 C8orf17Q9NRJ1 99 aa2.66□□□□□ -1.98
ATXN3-225ENST00000554214 APOBP04114 4563 aaKnown RBP2.65□□□□□ -1.99
ATXN3-225ENST00000554214 IGLV1-50A0A075B6I6 118 aa2.65□□□□□ -1.99
ATXN3-225ENST00000554214 IGHV3-64A0A075B6Q5 118 aa2.65□□□□□ -1.99
ATXN3-225ENST00000554214 IGHV3-53P01767 116 aa2.65□□□□□ -1.99
ATXN3-225ENST00000554214 MGPP08493 103 aa2.65□□□□□ -1.99
ATXN3-225ENST00000554214 CGB3P0DN86 165 aa2.65□□□□□ -1.99
ATXN3-225ENST00000554214 CGB7P0DN87 165 aa2.65□□□□□ -1.99
ATXN3-225ENST00000554214 CMC4P56277 68 aaPredicted RBP2.65□□□□□ -1.99
ATXN3-225ENST00000554214 CSAG1Q6PB30 78 aa2.65□□□□□ -1.99
ATXN3-225ENST00000554214 DNAH11Q96DT5 4516 aa2.64□□□□□ -1.99
ATXN3-225ENST00000554214 SRRM2Q9UQ35 2752 aaKnown RBP2.64□□□□□ -1.99
ATXN3-225ENST00000554214 DNAH6Q9C0G6 4158 aa2.64□□□□□ -1.99
ATXN3-225ENST00000554214 IGLV4-60A0A075B6I1 120 aa2.64□□□□□ -1.99
ATXN3-225ENST00000554214 A0A1W2PNM2 257 aa2.64□□□□□ -1.99
ATXN3-225ENST00000554214 NUPR2A6NF83 97 aa2.64□□□□□ -1.99
ATXN3-225ENST00000554214 IGKV4-1P06312 121 aa2.64□□□□□ -1.99
ATXN3-225ENST00000554214 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.64□□□□□ -1.99
ATXN3-225ENST00000554214 TMEM167AQ8TBQ9 72 aa2.64□□□□□ -1.99
ATXN3-225ENST00000554214 KCNQ1DNQ9H478 68 aa2.64□□□□□ -1.99
ATXN3-225ENST00000554214 TRGV4A0A0C4DH28 118 aa2.63□□□□□ -1.99
ATXN3-225ENST00000554214 IGHV1-3A0A0C4DH29 117 aa2.63□□□□□ -1.99
ATXN3-225ENST00000554214 A8MWP4 228 aa2.63□□□□□ -1.99
ATXN3-225ENST00000554214 UQCR11O14957 56 aa2.63□□□□□ -1.99
ATXN3-225ENST00000554214 DEFB4AO15263 64 aa2.63□□□□□ -1.99
ATXN3-225ENST00000554214 C1orf137Q5JT78 98 aa2.63□□□□□ -1.99
ATXN3-225ENST00000554214 CAMK2N1Q7Z7J9 78 aa2.63□□□□□ -1.99
ATXN3-225ENST00000554214 RPL39LQ96EH5 51 aaKnown RBP2.63□□□□□ -1.99
ATXN3-225ENST00000554214 DMAC1Q96GE9 116 aa2.63□□□□□ -1.99
ATXN3-225ENST00000554214 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.62□□□□□ -1.99
ATXN3-225ENST00000554214 IGKV2-40A0A087WW87 121 aaPredicted RBP2.62□□□□□ -1.99
ATXN3-225ENST00000554214 KRTAP4-16G5E9R7 235 aaPredicted RBP2.62□□□□□ -1.99
ATXN3-225ENST00000554214 IGKV1-17P01599 117 aa2.62□□□□□ -1.99
ATXN3-225ENST00000554214 IGKV2D-40P01614 121 aaPredicted RBP2.62□□□□□ -1.99
ATXN3-225ENST00000554214 COX7BP24311 80 aa2.62□□□□□ -1.99
ATXN3-225ENST00000554214 RPL39P62891 51 aaKnown RBP2.62□□□□□ -1.99
ATXN3-225ENST00000554214 DEFB135Q30KP9 77 aa2.62□□□□□ -1.99
ATXN3-225ENST00000554214 Q6ZTI0 123 aa2.62□□□□□ -1.99
ATXN3-225ENST00000554214 COA5Q86WW8 74 aa2.62□□□□□ -1.99
ATXN3-225ENST00000554214 DMBT1Q9UGM3 2413 aaPredicted RBP2.61□□□□□ -1.99
ATXN3-225ENST00000554214 MYCBP2O75592 4640 aa2.61□□□□□ -1.99
ATXN3-225ENST00000554214 IGHV3-66A0A0C4DH42 116 aa2.61□□□□□ -1.99
ATXN3-225ENST00000554214 IGLV2-23P01705 113 aa2.61□□□□□ -1.99
ATXN3-225ENST00000554214 APELAP0DMC3 54 aa2.61□□□□□ -1.99
ATXN3-225ENST00000554214 ADM2Q7Z4H4 148 aa2.61□□□□□ -1.99
ATXN3-225ENST00000554214 APLNQ9ULZ1 77 aa2.61□□□□□ -1.99
ATXN3-225ENST00000554214 TRBV6-4A0A1B0GX49 114 aa2.6□□□□□ -1.99
ATXN3-225ENST00000554214 SPINK7P58062 85 aa2.6□□□□□ -1.99
ATXN3-225ENST00000554214 KRTAP25-1Q3LHN0 102 aa2.6□□□□□ -1.99
ATXN3-225ENST00000554214 RPL39P5Q59GN2 51 aa2.6□□□□□ -1.99
ATXN3-225ENST00000554214 SPATA8Q6RVD6 105 aa2.6□□□□□ -1.99
ATXN3-225ENST00000554214 Q8TAT8 98 aa2.6□□□□□ -1.99
ATXN3-225ENST00000554214 RNF213Q63HN8 5207 aa2.6□□□□□ -1.99
ATXN3-225ENST00000554214 LRP1BQ9NZR2 4599 aa2.59□□□□□ -1.99
ATXN3-225ENST00000554214 CCL18P55774 89 aa2.59□□□□□ -1.99
ATXN3-225ENST00000554214 WT1-ASQ06250 92 aa2.59□□□□□ -1.99
ATXN3-225ENST00000554214 LINC00483Q53H64 154 aa2.59□□□□□ -1.99
ATXN3-225ENST00000554214 C20orf166-AS1Q96NR2 134 aa2.59□□□□□ -1.99
ATXN3-225ENST00000554214 DNAH5Q8TE73 4624 aa2.58□□□□□ -2
ATXN3-225ENST00000554214 LINC00158P58513 81 aa2.58□□□□□ -2
ATXN3-225ENST00000554214 LINC00575Q6W349 94 aa2.58□□□□□ -2
ATXN3-225ENST00000554214 IGLV11-55A0A075B6I3 123 aa2.57□□□□□ -2
ATXN3-225ENST00000554214 RNASE3P12724 160 aaKnown RBP2.57□□□□□ -2
ATXN3-225ENST00000554214 SPRR4Q96PI1 79 aa2.57□□□□□ -2
ATXN3-225ENST00000554214 VPS13BQ7Z7G8 4022 aa2.57□□□□□ -2
ATXN3-225ENST00000554214 I3L2K1 104 aa2.56□□□□□ -2
ATXN3-225ENST00000554214 M0QY20 66 aa2.56□□□□□ -2
ATXN3-225ENST00000554214 COX17Q14061 63 aa2.56□□□□□ -2
ATXN3-225ENST00000554214 CDKN2A-AS1Q9UH64 79 aa2.56□□□□□ -2
ATXN3-225ENST00000554214 SMR3BP02814 79 aaPredicted RBP2.55□□□□□ -2
ATXN3-225ENST00000554214 Q6ZQY7 126 aa2.55□□□□□ -2
ATXN3-225ENST00000554214 C9orf163Q8N9P6 203 aa2.55□□□□□ -2
ATXN3-225ENST00000554214 HMCN2Q8NDA2 5059 aa2.55□□□□□ -2
ATXN3-225ENST00000554214 RNF5Q99942 180 aa2.55□□□□□ -2
ATXN3-225ENST00000554214 FLG2Q5D862 2391 aaPredicted RBP2.54□□□□□ -2
ATXN3-225ENST00000554214 FAT1Q14517 4588 aa2.54□□□□□ -2
ATXN3-225ENST00000554214 IGKV3-7A0A075B6H7 116 aa2.54□□□□□ -2
ATXN3-225ENST00000554214 DEFB131BA0A096LNP1 70 aa2.54□□□□□ -2
ATXN3-225ENST00000554214 LINC00959A0A1B0GUT2 108 aa2.54□□□□□ -2
ATXN3-225ENST00000554214 P0C880 135 aa2.54□□□□□ -2
ATXN3-225ENST00000554214 DEFB116Q30KQ4 102 aa2.54□□□□□ -2
ATXN3-225ENST00000554214 A0A1B0GVX0 72 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms