RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 DMBT1Q9UGM3 2413 aaPredicted RBP0.8□□□□□ -2.28
SYNE2-210ENST00000553455 FLGP20930 4061 aaPredicted RBP0.8□□□□□ -2.28
SYNE2-210ENST00000553455 UBR4Q5T4S7 5183 aa0.8□□□□□ -2.28
SYNE2-210ENST00000553455 GVQW2A0A096LPI5 108 aaPredicted RBP0.8□□□□□ -2.28
SYNE2-210ENST00000553455 LINC00959A0A1B0GUT2 108 aa0.8□□□□□ -2.28
SYNE2-210ENST00000553455 MT-ND4LP03901 98 aa0.8□□□□□ -2.28
SYNE2-210ENST00000553455 HTN3P15516 51 aa0.8□□□□□ -2.28
SYNE2-210ENST00000553455 WFDC2Q14508 124 aa0.8□□□□□ -2.28
SYNE2-210ENST00000553455 UBE2DNLQ8IWF7 75 aa0.8□□□□□ -2.28
SYNE2-210ENST00000553455 Q8N8P6 123 aa0.8□□□□□ -2.28
SYNE2-210ENST00000553455 PLAC4Q8WY50 150 aa0.8□□□□□ -2.28
SYNE2-210ENST00000553455 TMEM141Q96I45 108 aa0.8□□□□□ -2.28
SYNE2-210ENST00000553455 ST20Q9HBF5 79 aa0.8□□□□□ -2.28
SYNE2-210ENST00000553455 SPANXA1Q9NS26 97 aa0.8□□□□□ -2.28
SYNE2-210ENST00000553455 LINC00474Q9P2X8 69 aa0.8□□□□□ -2.28
SYNE2-210ENST00000553455 UBE2D4Q9Y2X8 147 aa0.8□□□□□ -2.28
SYNE2-210ENST00000553455 RNF213Q63HN8 5207 aa0.8□□□□□ -2.28
SYNE2-210ENST00000553455 C7orf77A4D0Y5 90 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 TMEM262E9PQX1 116 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 ADCYAP1P18509 176 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 FCER1GP30273 86 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 CKS2P33552 79 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 UBE2D1P51668 147 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 SEC11AP67812 179 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 COX6A2Q02221 97 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 COX17Q14061 63 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 ADIRFQ15847 76 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 ZNF56Q15929 161 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 FAM74A4Q5TZK3 123 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 Q5XG85 94 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 DEFB104AQ8WTQ1 72 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 RPL39LQ96EH5 51 aaKnown RBP0.79□□□□□ -2.28
SYNE2-210ENST00000553455 SMIM2Q9BVW6 85 aa0.79□□□□□ -2.28
SYNE2-210ENST00000553455 NXT2Q9NPJ8 142 aaKnown RBP0.79□□□□□ -2.28
SYNE2-210ENST00000553455 MRPL35Q9NZE8 188 aaKnown RBP0.79□□□□□ -2.28
SYNE2-210ENST00000553455 MUC2Q02817 5179 aa0.78□□□□□ -2.28
SYNE2-210ENST00000553455 D6R8Y8 96 aa0.78□□□□□ -2.28
SYNE2-210ENST00000553455 UQCRQO14949 82 aa0.78□□□□□ -2.28
SYNE2-210ENST00000553455 MT1HL1P0DM35 61 aa0.78□□□□□ -2.28
SYNE2-210ENST00000553455 IFI27P40305 119 aaPredicted RBP0.78□□□□□ -2.28
SYNE2-210ENST00000553455 LRP2P98164 4655 aa0.78□□□□□ -2.28
SYNE2-210ENST00000553455 SPATA8Q6RVD6 105 aa0.78□□□□□ -2.28
SYNE2-210ENST00000553455 SFTA2Q6UW10 78 aa0.78□□□□□ -2.28
SYNE2-210ENST00000553455 SPINK6Q6UWN8 80 aa0.78□□□□□ -2.28
SYNE2-210ENST00000553455 BAGE3Q86Y29 109 aa0.78□□□□□ -2.28
SYNE2-210ENST00000553455 Q8IZM0 81 aa0.78□□□□□ -2.28
SYNE2-210ENST00000553455 SVBPQ8N300 66 aa0.78□□□□□ -2.28
SYNE2-210ENST00000553455 C18orf32Q8TCD1 76 aa0.78□□□□□ -2.28
SYNE2-210ENST00000553455 LINC01600Q96MT4 127 aa0.78□□□□□ -2.28
SYNE2-210ENST00000553455 SMCO4Q9NRQ5 59 aa0.78□□□□□ -2.28
SYNE2-210ENST00000553455 LINC00587B1AMM8 73 aa0.77□□□□□ -2.29
SYNE2-210ENST00000553455 J3KT08 172 aa0.77□□□□□ -2.29
SYNE2-210ENST00000553455 MGPP08493 103 aa0.77□□□□□ -2.29
SYNE2-210ENST00000553455 IGLC3P0DOY3 106 aa0.77□□□□□ -2.29
SYNE2-210ENST00000553455 S100PP25815 95 aa0.77□□□□□ -2.29
SYNE2-210ENST00000553455 RPL39P62891 51 aaKnown RBP0.77□□□□□ -2.29
SYNE2-210ENST00000553455 MRPL54Q6P161 138 aaKnown RBP0.77□□□□□ -2.29
SYNE2-210ENST00000553455 C6orf48Q9UBA6 75 aa0.77□□□□□ -2.29
SYNE2-210ENST00000553455 CDKN2A-AS1Q9UH64 79 aa0.77□□□□□ -2.29
SYNE2-210ENST00000553455 LPAP08519 4548 aa0.77□□□□□ -2.29
SYNE2-210ENST00000553455 A0A096LNI7 61 aa0.76□□□□□ -2.29
SYNE2-210ENST00000553455 F8VRH5 84 aa0.76□□□□□ -2.29
SYNE2-210ENST00000553455 NDUFA1O15239 70 aa0.76□□□□□ -2.29
SYNE2-210ENST00000553455 APOC3P02656 99 aa0.76□□□□□ -2.29
SYNE2-210ENST00000553455 SMR3BP02814 79 aaPredicted RBP0.76□□□□□ -2.29
SYNE2-210ENST00000553455 SPRR1AP35321 89 aa0.76□□□□□ -2.29
SYNE2-210ENST00000553455 AKR1D1P51857 326 aa0.76□□□□□ -2.29
SYNE2-210ENST00000553455 C9orf116Q5BN46 136 aaPredicted RBP0.76□□□□□ -2.29
SYNE2-210ENST00000553455 Q5VSD8 79 aa0.76□□□□□ -2.29
SYNE2-210ENST00000553455 Q6ZUT4 128 aa0.76□□□□□ -2.29
SYNE2-210ENST00000553455 C5orf38Q86SI9 138 aa0.76□□□□□ -2.29
SYNE2-210ENST00000553455 COX7B2Q8TF08 81 aa0.76□□□□□ -2.29
SYNE2-210ENST00000553455 KCNQ1DNQ9H478 68 aa0.76□□□□□ -2.29
SYNE2-210ENST00000553455 LEPROTL1O95214 131 aa0.75□□□□□ -2.29
SYNE2-210ENST00000553455 S100A1P23297 94 aa0.75□□□□□ -2.29
SYNE2-210ENST00000553455 RPS29P62273 56 aaKnown RBP0.75□□□□□ -2.29
SYNE2-210ENST00000553455 SPAG11BQ08648 103 aa0.75□□□□□ -2.29
SYNE2-210ENST00000553455 LINC01545Q5VT33 79 aa0.75□□□□□ -2.29
SYNE2-210ENST00000553455 SSBP3-AS1Q7Z2R9 100 aa0.75□□□□□ -2.29
SYNE2-210ENST00000553455 IFI27L1Q96BM0 104 aa0.75□□□□□ -2.29
SYNE2-210ENST00000553455 C2orf88Q9BSF0 95 aa0.75□□□□□ -2.29
SYNE2-210ENST00000553455 FAT4Q6V0I7 4981 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 MYMXA0A1B0GTQ4 84 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 SYS1-DBNDD2H3BUS1 97 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 DLEU1O43261 78 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 BCE1O60756 84 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 DPM2O94777 84 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 IGKCP01834 107 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 IFITM1P13164 125 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 SPRR1BP22528 89 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 PLNP26678 52 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 CKS1BP61024 79 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 ASB16-AS1Q495Z4 193 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 MEIG1Q5JSS6 88 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 SPAG11AQ6PDA7 123 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 CLPSL2Q6UWE3 100 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 DPH3Q96FX2 82 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 LINC00208Q96KT6 92 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 ERG28Q9UKR5 140 aa0.74□□□□□ -2.29
SYNE2-210ENST00000553455 A0A1B0GX51 115 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms