RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 LINC00472Q9H8W2 130 aa4.9□□□□□ -1.63
GCN1-205ENST00000548821 UQCR10Q9UDW1 63 aa4.9□□□□□ -1.63
GCN1-205ENST00000548821 A0A1B0GVX0 72 aa4.88□□□□□ -1.63
GCN1-205ENST00000548821 PDE6GP18545 87 aa4.88□□□□□ -1.63
GCN1-205ENST00000548821 A0A1B0GV72 72 aa4.87□□□□□ -1.63
GCN1-205ENST00000548821 JMJD7-PLA2G4BH0Y9G9 81 aa4.87□□□□□ -1.63
GCN1-205ENST00000548821 LYRM7Q5U5X0 104 aa4.87□□□□□ -1.63
GCN1-205ENST00000548821 LINC00846Q9NV44 126 aa4.87□□□□□ -1.63
GCN1-205ENST00000548821 KRTAP16-1A8MUX0 517 aa4.86□□□□□ -1.63
GCN1-205ENST00000548821 DEFB116Q30KQ4 102 aa4.86□□□□□ -1.63
GCN1-205ENST00000548821 BAALC-AS2P0C853 105 aa4.85□□□□□ -1.63
GCN1-205ENST00000548821 K7ERJ3 54 aa4.84□□□□□ -1.63
GCN1-205ENST00000548821 ATXN8Q156A1 80 aa4.83□□□□□ -1.64
GCN1-205ENST00000548821 PYY3Q5JQD4 70 aa4.83□□□□□ -1.64
GCN1-205ENST00000548821 ZCCHC13Q8WW36 166 aaKnown RBP4.83□□□□□ -1.64
GCN1-205ENST00000548821 KRTAP9-8Q9BYQ0 159 aa4.83□□□□□ -1.64
GCN1-205ENST00000548821 M0R143 59 aa4.82□□□□□ -1.64
GCN1-205ENST00000548821 Q6ZQT0 140 aa4.82□□□□□ -1.64
GCN1-205ENST00000548821 HRES1P13985 223 aa4.81□□□□□ -1.64
GCN1-205ENST00000548821 SPINK7P58062 85 aa4.81□□□□□ -1.64
GCN1-205ENST00000548821 NOTCH2NLQ7Z3S9 236 aa4.81□□□□□ -1.64
GCN1-205ENST00000548821 MPLKIPQ8TAP9 179 aa4.81□□□□□ -1.64
GCN1-205ENST00000548821 KRTAP10-10P60014 251 aa4.8□□□□□ -1.64
GCN1-205ENST00000548821 A8MWP4 228 aa4.79□□□□□ -1.64
GCN1-205ENST00000548821 Q8N9P0 234 aaPredicted RBP4.79□□□□□ -1.64
GCN1-205ENST00000548821 LOC110117498A0A087WWA1 95 aa4.78□□□□□ -1.64
GCN1-205ENST00000548821 NREPQ16612 68 aa4.78□□□□□ -1.64
GCN1-205ENST00000548821 C8orf17Q9NRJ1 99 aa4.76□□□□□ -1.65
GCN1-205ENST00000548821 MT2AP02795 61 aa4.75□□□□□ -1.65
GCN1-205ENST00000548821 Q6ZVQ6 151 aa4.75□□□□□ -1.65
GCN1-205ENST00000548821 WFDC13Q8IUB5 93 aa4.75□□□□□ -1.65
GCN1-205ENST00000548821 IGKV3D-7A0A0C4DH55 119 aa4.73□□□□□ -1.65
GCN1-205ENST00000548821 PRR15Q8IV56 129 aa4.73□□□□□ -1.65
GCN1-205ENST00000548821 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
GCN1-205ENST00000548821 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
GCN1-205ENST00000548821 TMEM254Q8TBM7 123 aa4.72□□□□□ -1.65
GCN1-205ENST00000548821 MRPL34Q9BQ48 92 aaKnown RBP4.71□□□□□ -1.66
GCN1-205ENST00000548821 USH2AO75445 5202 aa4.7□□□□□ -1.66
GCN1-205ENST00000548821 NDUFS5O43920 106 aa4.7□□□□□ -1.66
GCN1-205ENST00000548821 C14orf132Q9NPU4 83 aa4.7□□□□□ -1.66
GCN1-205ENST00000548821 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
GCN1-205ENST00000548821 hDV103S1A0JD37 113 aa4.69□□□□□ -1.66
GCN1-205ENST00000548821 MT1FP04733 61 aa4.69□□□□□ -1.66
GCN1-205ENST00000548821 KRTAP9-3Q9BYQ3 159 aa4.69□□□□□ -1.66
GCN1-205ENST00000548821 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
GCN1-205ENST00000548821 H1FX-AS1Q4G0G2 97 aa4.68□□□□□ -1.66
GCN1-205ENST00000548821 TSTD3H0UI37 97 aa4.67□□□□□ -1.66
GCN1-205ENST00000548821 BPY2O14599 106 aa4.67□□□□□ -1.66
GCN1-205ENST00000548821 H3BT86 120 aa4.66□□□□□ -1.66
GCN1-205ENST00000548821 SMIM6P0DI80 62 aa4.65□□□□□ -1.67
GCN1-205ENST00000548821 KRTAP19-1Q8IUB9 90 aa4.65□□□□□ -1.67
GCN1-205ENST00000548821 SSPOA2VEC9 5147 aa4.65□□□□□ -1.67
GCN1-205ENST00000548821 C7orf65Q6ZTY9 151 aa4.64□□□□□ -1.67
GCN1-205ENST00000548821 NAA38Q9BRA0 125 aaKnown RBP4.64□□□□□ -1.67
GCN1-205ENST00000548821 MMP24-AS1A0A0U1RRL7 71 aa4.63□□□□□ -1.67
GCN1-205ENST00000548821 BATFQ16520 125 aa4.62□□□□□ -1.67
GCN1-205ENST00000548821 IGKV2D-30A0A075B6S6 120 aa4.61□□□□□ -1.67
GCN1-205ENST00000548821 IGKV2-30P06310 120 aa4.61□□□□□ -1.67
GCN1-205ENST00000548821 CXCL6P80162 114 aa4.61□□□□□ -1.67
GCN1-205ENST00000548821 C9orf118A6NHY6 69 aa4.6□□□□□ -1.67
GCN1-205ENST00000548821 K7EQZ3 153 aa4.6□□□□□ -1.67
GCN1-205ENST00000548821 CASC2Q6XLA1 102 aa4.6□□□□□ -1.67
GCN1-205ENST00000548821 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.67
GCN1-205ENST00000548821 A0A1W2PPM0 123 aa4.58□□□□□ -1.68
GCN1-205ENST00000548821 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
GCN1-205ENST00000548821 UBL5Q9BZL1 73 aa4.58□□□□□ -1.68
GCN1-205ENST00000548821 HCG22E2RYF7 251 aa4.56□□□□□ -1.68
GCN1-205ENST00000548821 TP53AIP1Q9HCN2 124 aa4.53□□□□□ -1.68
GCN1-205ENST00000548821 FAM236AA0A1B0GUQ0 79 aa4.52□□□□□ -1.69
GCN1-205ENST00000548821 FAM236BA0A1B0GV22 79 aa4.52□□□□□ -1.69
GCN1-205ENST00000548821 CSAG1Q6PB30 78 aa4.52□□□□□ -1.69
GCN1-205ENST00000548821 SPCS1Q9Y6A9 102 aa4.52□□□□□ -1.69
GCN1-205ENST00000548821 TAX1BP3O14907 124 aa4.51□□□□□ -1.69
GCN1-205ENST00000548821 C4orf26Q17RF5 130 aa4.51□□□□□ -1.69
GCN1-205ENST00000548821 Q5W150 140 aa4.51□□□□□ -1.69
GCN1-205ENST00000548821 MACF1Q9UPN3 7388 aaKnown RBP4.51□□□□□ -1.69
GCN1-205ENST00000548821 SYNE2Q8WXH0 6885 aaKnown RBP4.48□□□□□ -1.69
GCN1-205ENST00000548821 Q8N9L7 120 aa4.48□□□□□ -1.69
GCN1-205ENST00000548821 S4R3F8 94 aa4.48□□□□□ -1.69
GCN1-205ENST00000548821 C1orf64Q8NEQ6 169 aa4.47□□□□□ -1.69
GCN1-205ENST00000548821 C5orf47Q569G3 176 aa4.46□□□□□ -1.7
GCN1-205ENST00000548821 COL5A1-AS1Q5SY13 56 aa4.46□□□□□ -1.7
GCN1-205ENST00000548821 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
GCN1-205ENST00000548821 KRTAP4-8Q9BYQ9 185 aa4.45□□□□□ -1.7
GCN1-205ENST00000548821 GTF2H5Q6ZYL4 71 aa4.44□□□□□ -1.7
GCN1-205ENST00000548821 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
GCN1-205ENST00000548821 Q5VV11 94 aa4.43□□□□□ -1.7
GCN1-205ENST00000548821 A6NN06 94 aa4.41□□□□□ -1.7
GCN1-205ENST00000548821 F8W1H4 67 aa4.41□□□□□ -1.7
GCN1-205ENST00000548821 CRIPTQ9P021 101 aa4.41□□□□□ -1.7
GCN1-205ENST00000548821 K7EP34 96 aa4.4□□□□□ -1.71
GCN1-205ENST00000548821 SVIPQ8NHG7 77 aa4.4□□□□□ -1.71
GCN1-205ENST00000548821 KRTAP4-12Q9BQ66 201 aa4.4□□□□□ -1.71
GCN1-205ENST00000548821 LCA10Q71F78 164 aa4.38□□□□□ -1.71
GCN1-205ENST00000548821 LOC101927531A0A1B0GV80 90 aa4.37□□□□□ -1.71
GCN1-205ENST00000548821 ACYP1P07311 99 aa4.37□□□□□ -1.71
GCN1-205ENST00000548821 KLKP1Q107X0 134 aa4.37□□□□□ -1.71
GCN1-205ENST00000548821 IMUPQ9GZP8 106 aa4.37□□□□□ -1.71
GCN1-205ENST00000548821 LOC105371267A0A1B0GV96 52 aa4.36□□□□□ -1.71
GCN1-205ENST00000548821 SPRR2GQ9BYE4 73 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms