RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 CDK2AP2O75956 126 aa12.15□□□□□ -0.46
RITA1-201ENST00000548278 hDV103S1A0JD37 113 aa12.14□□□□□ -0.47
RITA1-201ENST00000548278 C8orf17Q9NRJ1 99 aa12.14□□□□□ -0.47
RITA1-201ENST00000548278 IGHV6-1A0A0B4J1U7 121 aa12.13□□□□□ -0.47
RITA1-201ENST00000548278 PRO0628Q9UI54 55 aa12.13□□□□□ -0.47
RITA1-201ENST00000548278 NDUFC1O43677 76 aa12.12□□□□□ -0.47
RITA1-201ENST00000548278 KRTAP10-4P60372 401 aaPredicted RBP12.09□□□□□ -0.47
RITA1-201ENST00000548278 NOTCH2NLQ7Z3S9 236 aa12.07□□□□□ -0.48
RITA1-201ENST00000548278 TYMSOSQ8TAI1 123 aa12.07□□□□□ -0.48
RITA1-201ENST00000548278 ZCCHC13Q8WW36 166 aaKnown RBP12.06□□□□□ -0.48
RITA1-201ENST00000548278 FAT1Q14517 4588 aa12.06□□□□□ -0.48
RITA1-201ENST00000548278 SMIM26A0A096LP01 95 aa12.05□□□□□ -0.48
RITA1-201ENST00000548278 C1orf195Q5TG92 126 aa12.04□□□□□ -0.48
RITA1-201ENST00000548278 PRR26Q8N8Z3 221 aa12.01□□□□□ -0.49
RITA1-201ENST00000548278 MP68P56378 58 aa12□□□□□ -0.49
RITA1-201ENST00000548278 LIMD2Q9BT23 127 aa12□□□□□ -0.49
RITA1-201ENST00000548278 ATP5EP56381 51 aaPredicted RBP11.99□□□□□ -0.49
RITA1-201ENST00000548278 C4orf48Q5BLP8 95 aa11.99□□□□□ -0.49
RITA1-201ENST00000548278 MRPL34Q9BQ48 92 aaKnown RBP11.99□□□□□ -0.49
RITA1-201ENST00000548278 H0Y9P7 68 aa11.98□□□□□ -0.49
RITA1-201ENST00000548278 SPINK1P00995 79 aa11.97□□□□□ -0.49
RITA1-201ENST00000548278 FP248Q71RG6 208 aaPredicted RBP11.97□□□□□ -0.49
RITA1-201ENST00000548278 TP53AIP1Q9HCN2 124 aa11.96□□□□□ -0.49
RITA1-201ENST00000548278 RYR3Q15413 4870 aa11.94□□□□□ -0.5
RITA1-201ENST00000548278 C8orf87E5RJ46 101 aa11.94□□□□□ -0.5
RITA1-201ENST00000548278 LINC00208Q96KT6 92 aa11.94□□□□□ -0.5
RITA1-201ENST00000548278 H3BPC8 53 aa11.93□□□□□ -0.5
RITA1-201ENST00000548278 TRAV22A0A0B4J277 110 aa11.93□□□□□ -0.5
RITA1-201ENST00000548278 LINC00304Q8N9R0 145 aa11.92□□□□□ -0.5
RITA1-201ENST00000548278 NDUFS5O43920 106 aa11.91□□□□□ -0.5
RITA1-201ENST00000548278 LINC00313P59037 77 aa11.88□□□□□ -0.51
RITA1-201ENST00000548278 RPS29P62273 56 aaKnown RBP11.88□□□□□ -0.51
RITA1-201ENST00000548278 SPAG11AQ6PDA7 123 aa11.88□□□□□ -0.51
RITA1-201ENST00000548278 C1orf64Q8NEQ6 169 aa11.87□□□□□ -0.51
RITA1-201ENST00000548278 PKHD1L1Q86WI1 4243 aa11.84□□□□□ -0.51
RITA1-201ENST00000548278 FAM229AH3BQW9 127 aa11.82□□□□□ -0.52
RITA1-201ENST00000548278 HSPG2P98160 4391 aa11.8□□□□□ -0.52
RITA1-201ENST00000548278 KRTAP16-1A8MUX0 517 aa11.78□□□□□ -0.52
RITA1-201ENST00000548278 Q8N9P0 234 aaPredicted RBP11.77□□□□□ -0.52
RITA1-201ENST00000548278 KRTAP13-3Q3SY46 172 aa11.76□□□□□ -0.53
RITA1-201ENST00000548278 Q5W150 140 aa11.76□□□□□ -0.53
RITA1-201ENST00000548278 Q5VSD8 79 aa11.74□□□□□ -0.53
RITA1-201ENST00000548278 SPANXA2-OT1Q8N9U9 137 aa11.71□□□□□ -0.54
RITA1-201ENST00000548278 BRK1Q8WUW1 75 aa11.71□□□□□ -0.54
RITA1-201ENST00000548278 CYP4F30PQ9H0H9 118 aa11.71□□□□□ -0.54
RITA1-201ENST00000548278 RYR1P21817 5038 aa11.7□□□□□ -0.54
RITA1-201ENST00000548278 PRR4Q16378 134 aa11.69□□□□□ -0.54
RITA1-201ENST00000548278 KRTAP17-1Q9BYP8 105 aa11.66□□□□□ -0.54
RITA1-201ENST00000548278 V9GYY9 64 aa11.66□□□□□ -0.54
RITA1-201ENST00000548278 LOC101927531A0A1B0GV80 90 aa11.65□□□□□ -0.54
RITA1-201ENST00000548278 PCOTHQ58A44 107 aa11.65□□□□□ -0.54
RITA1-201ENST00000548278 KRTAP10-8P60410 259 aa11.61□□□□□ -0.55
RITA1-201ENST00000548278 LRP1Q07954 4544 aaKnown RBP11.61□□□□□ -0.55
RITA1-201ENST00000548278 IGLV7-46A0A075B6I9 117 aa11.6□□□□□ -0.55
RITA1-201ENST00000548278 FLG2Q5D862 2391 aaPredicted RBP11.6□□□□□ -0.55
RITA1-201ENST00000548278 Q8N1X5 172 aa11.59□□□□□ -0.55
RITA1-201ENST00000548278 MPLKIPQ8TAP9 179 aa11.59□□□□□ -0.55
RITA1-201ENST00000548278 RETNLBQ9BQ08 111 aa11.59□□□□□ -0.55
RITA1-201ENST00000548278 TNXBP22105 4242 aa11.59□□□□□ -0.55
RITA1-201ENST00000548278 SEC61GP60059 68 aa11.58□□□□□ -0.56
RITA1-201ENST00000548278 KIAA1109Q2LD37 5005 aa11.54□□□□□ -0.56
RITA1-201ENST00000548278 Q1T7F1 81 aa11.54□□□□□ -0.56
RITA1-201ENST00000548278 IGKV2-30P06310 120 aa11.51□□□□□ -0.57
RITA1-201ENST00000548278 EPPK1P58107 5090 aaKnown RBP11.49□□□□□ -0.57
RITA1-201ENST00000548278 FAT3Q8TDW7 4589 aa11.49□□□□□ -0.57
RITA1-201ENST00000548278 C9orf92A6NGG3 77 aa11.48□□□□□ -0.57
RITA1-201ENST00000548278 C20orf166-AS1Q96NR2 134 aa11.44□□□□□ -0.58
RITA1-201ENST00000548278 A8MUU9 505 aa11.43□□□□□ -0.58
RITA1-201ENST00000548278 PMAIP1Q13794 54 aa11.42□□□□□ -0.58
RITA1-201ENST00000548278 HRES1P13985 223 aa11.41□□□□□ -0.58
RITA1-201ENST00000548278 IGKV2D-30A0A075B6S6 120 aa11.39□□□□□ -0.59
RITA1-201ENST00000548278 COA5Q86WW8 74 aa11.39□□□□□ -0.59
RITA1-201ENST00000548278 MT1HL1P0DM35 61 aa11.38□□□□□ -0.59
RITA1-201ENST00000548278 DMBT1Q9UGM3 2413 aaPredicted RBP11.38□□□□□ -0.59
RITA1-201ENST00000548278 MYCBP2O75592 4640 aa11.34□□□□□ -0.59
RITA1-201ENST00000548278 DMAC1Q96GE9 116 aa11.29□□□□□ -0.6
RITA1-201ENST00000548278 C7orf65Q6ZTY9 151 aa11.28□□□□□ -0.6
RITA1-201ENST00000548278 Q75L30 129 aa11.27□□□□□ -0.61
RITA1-201ENST00000548278 ACYP2P14621 99 aa11.24□□□□□ -0.61
RITA1-201ENST00000548278 PSPHP1O15172 72 aa11.23□□□□□ -0.61
RITA1-201ENST00000548278 KRTAP4-5Q9BYR2 181 aa11.23□□□□□ -0.61
RITA1-201ENST00000548278 A8MUN3 132 aa11.16□□□□□ -0.62
RITA1-201ENST00000548278 Q5VV11 94 aa11.16□□□□□ -0.62
RITA1-201ENST00000548278 SPINK7P58062 85 aa11.12□□□□□ -0.63
RITA1-201ENST00000548278 XP32Q5T750 250 aa11.12□□□□□ -0.63
RITA1-201ENST00000548278 RPL37P61927 97 aaKnown RBP11.09□□□□□ -0.63
RITA1-201ENST00000548278 ATP11AUNQ6ZP68 121 aa11.07□□□□□ -0.64
RITA1-201ENST00000548278 CHKB-CPT1BH3BT56 60 aa11.07□□□□□ -0.64
RITA1-201ENST00000548278 KTN1-AS1Q86SY8 53 aa11.04□□□□□ -0.64
RITA1-201ENST00000548278 LINC01558Q9Y6Z2 57 aa11.03□□□□□ -0.64
RITA1-201ENST00000548278 A8MU10 97 aa11□□□□□ -0.65
RITA1-201ENST00000548278 PRR15LQ9BU68 103 aa11□□□□□ -0.65
RITA1-201ENST00000548278 KRTAP3-1Q9BYR8 98 aa10.97□□□□□ -0.65
RITA1-201ENST00000548278 TPRXLQ17RH7 258 aa10.95□□□□□ -0.66
RITA1-201ENST00000548278 LCA10Q71F78 164 aa10.94□□□□□ -0.66
RITA1-201ENST00000548278 ABCA13Q86UQ4 5058 aa10.92□□□□□ -0.66
RITA1-201ENST00000548278 BIRC6Q9NR09 4857 aa10.91□□□□□ -0.66
RITA1-201ENST00000548278 A6NN06 94 aa10.91□□□□□ -0.66
RITA1-201ENST00000548278 RBM12B-AS1Q9P1G2 102 aa10.89□□□□□ -0.67
RITA1-201ENST00000548278 CDC42SE1Q9NRR8 79 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 266 ms