RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 IGKV4-1P06312 121 aa9.31□□□□□ -0.92
CHERP-204ENST00000546538 DEFB116Q30KQ4 102 aa9.31□□□□□ -0.92
CHERP-204ENST00000546538 TRBV7-4A0A0J9YYF1 115 aa9.3□□□□□ -0.92
CHERP-204ENST00000546538 LINC00472Q9H8W2 130 aa9.3□□□□□ -0.92
CHERP-204ENST00000546538 KRTAP9-7A8MTY7 169 aa9.29□□□□□ -0.92
CHERP-204ENST00000546538 K7EP34 96 aa9.29□□□□□ -0.92
CHERP-204ENST00000546538 LCE2BO14633 110 aa9.29□□□□□ -0.92
CHERP-204ENST00000546538 ATXN8Q156A1 80 aa9.29□□□□□ -0.92
CHERP-204ENST00000546538 ANKRD29Q8N6D5 301 aa9.28□□□□□ -0.92
CHERP-204ENST00000546538 GHRHP01286 108 aa9.26□□□□□ -0.93
CHERP-204ENST00000546538 KRTAP9-3Q9BYQ3 159 aa9.25□□□□□ -0.93
CHERP-204ENST00000546538 ORMDL1Q9P0S3 153 aa9.24□□□□□ -0.93
CHERP-204ENST00000546538 FAM236DA0A1B0GTK5 79 aa9.23□□□□□ -0.93
CHERP-204ENST00000546538 FAM236CP0DP71 79 aa9.23□□□□□ -0.93
CHERP-204ENST00000546538 DNAL4O96015 105 aa9.22□□□□□ -0.93
CHERP-204ENST00000546538 TRACP01848 142 aa9.22□□□□□ -0.93
CHERP-204ENST00000546538 UBE2V1Q13404 147 aa9.22□□□□□ -0.93
CHERP-204ENST00000546538 IGHV6-1A0A0B4J1U7 121 aa9.21□□□□□ -0.94
CHERP-204ENST00000546538 CCKP06307 115 aa9.21□□□□□ -0.94
CHERP-204ENST00000546538 KRTAP19-1Q8IUB9 90 aa9.19□□□□□ -0.94
CHERP-204ENST00000546538 C9JAW5 83 aa9.17□□□□□ -0.94
CHERP-204ENST00000546538 TMEM256-PLSCR3K7ERE1 68 aa9.17□□□□□ -0.94
CHERP-204ENST00000546538 RBM12B-AS1Q9P1G2 102 aa9.17□□□□□ -0.94
CHERP-204ENST00000546538 H3BQ85 93 aa9.14□□□□□ -0.95
CHERP-204ENST00000546538 KRTAP10-10P60014 251 aa9.14□□□□□ -0.95
CHERP-204ENST00000546538 A0A1B0GVX0 72 aa9.14□□□□□ -0.95
CHERP-204ENST00000546538 F8W1H4 67 aa9.14□□□□□ -0.95
CHERP-204ENST00000546538 H3BT86 120 aa9.13□□□□□ -0.95
CHERP-204ENST00000546538 MTURNQ8N3F0 131 aa9.12□□□□□ -0.95
CHERP-204ENST00000546538 BAALC-AS2P0C853 105 aa9.1□□□□□ -0.95
CHERP-204ENST00000546538 PRO0461Q9UI25 63 aa9.1□□□□□ -0.95
CHERP-204ENST00000546538 C8orf87E5RJ46 101 aa9.09□□□□□ -0.95
CHERP-204ENST00000546538 VPS25Q9BRG1 176 aa9.09□□□□□ -0.95
CHERP-204ENST00000546538 ZCCHC13Q8WW36 166 aaKnown RBP9.08□□□□□ -0.96
CHERP-204ENST00000546538 MACF1Q9UPN3 7388 aaKnown RBP9.07□□□□□ -0.96
CHERP-204ENST00000546538 SMCPP49901 116 aaPredicted RBP9.05□□□□□ -0.96
CHERP-204ENST00000546538 SPINK7P58062 85 aa9.05□□□□□ -0.96
CHERP-204ENST00000546538 RBM3P98179 157 aaKnown RBP9.05□□□□□ -0.96
CHERP-204ENST00000546538 Q8N9P0 234 aaPredicted RBP9.02□□□□□ -0.97
CHERP-204ENST00000546538 Q6ZQT0 140 aa9.01□□□□□ -0.97
CHERP-204ENST00000546538 DSCR8Q96T75 97 aa9.01□□□□□ -0.97
CHERP-204ENST00000546538 SYNE2Q8WXH0 6885 aaKnown RBP9.01□□□□□ -0.97
CHERP-204ENST00000546538 ETDBQ3ZM63 59 aa9□□□□□ -0.97
CHERP-204ENST00000546538 JMJD7-PLA2G4BH0Y9G9 81 aa8.98□□□□□ -0.97
CHERP-204ENST00000546538 J3KT08 172 aa8.97□□□□□ -0.97
CHERP-204ENST00000546538 KRTAP19-6Q3LI70 58 aa8.95□□□□□ -0.98
CHERP-204ENST00000546538 WFDC13Q8IUB5 93 aa8.94□□□□□ -0.98
CHERP-204ENST00000546538 C8orf17Q9NRJ1 99 aa8.94□□□□□ -0.98
CHERP-204ENST00000546538 IGKV3D-7A0A0C4DH55 119 aa8.93□□□□□ -0.98
CHERP-204ENST00000546538 A8MWP4 228 aa8.91□□□□□ -0.98
CHERP-204ENST00000546538 PDE6GP18545 87 aa8.89□□□□□ -0.99
CHERP-204ENST00000546538 C21orf62-AS1Q17RA5 79 aa8.89□□□□□ -0.99
CHERP-204ENST00000546538 C14orf132Q9NPU4 83 aa8.89□□□□□ -0.99
CHERP-204ENST00000546538 J3QR89 54 aa8.88□□□□□ -0.99
CHERP-204ENST00000546538 NDUFB1O75438 58 aa8.88□□□□□ -0.99
CHERP-204ENST00000546538 LOC110117498A0A087WWA1 95 aa8.88□□□□□ -0.99
CHERP-204ENST00000546538 Q6ZVQ6 151 aa8.85□□□□□ -0.99
CHERP-204ENST00000546538 K7ERU9 68 aa8.84□□□□□ -0.99
CHERP-204ENST00000546538 PRR15Q8IV56 129 aa8.82□□□□□ -1
CHERP-204ENST00000546538 MMP24-AS1A0A0U1RRL7 71 aa8.8□□□□□ -1
CHERP-204ENST00000546538 A0A1B0GW54 56 aa8.8□□□□□ -1
CHERP-204ENST00000546538 FAM240AA0A1B0GVK7 77 aa8.78□□□□□ -1
CHERP-204ENST00000546538 ACYP1P07311 99 aa8.78□□□□□ -1
CHERP-204ENST00000546538 MRPL34Q9BQ48 92 aaKnown RBP8.76□□□□□ -1.01
CHERP-204ENST00000546538 TMEM254Q8TBM7 123 aa8.75□□□□□ -1.01
CHERP-204ENST00000546538 H1FX-AS1Q4G0G2 97 aa8.74□□□□□ -1.01
CHERP-204ENST00000546538 LINC00846Q9NV44 126 aa8.73□□□□□ -1.01
CHERP-204ENST00000546538 K7EQZ3 153 aa8.71□□□□□ -1.01
CHERP-204ENST00000546538 NREPQ16612 68 aa8.71□□□□□ -1.01
CHERP-204ENST00000546538 Q5W150 140 aa8.7□□□□□ -1.02
CHERP-204ENST00000546538 hDV103S1A0JD37 113 aa8.68□□□□□ -1.02
CHERP-204ENST00000546538 UBL5Q9BZL1 73 aa8.68□□□□□ -1.02
CHERP-204ENST00000546538 KRTAP6-3Q3LI67 103 aa8.64□□□□□ -1.03
CHERP-204ENST00000546538 IGKV2D-30A0A075B6S6 120 aa8.63□□□□□ -1.03
CHERP-204ENST00000546538 NDUFS5O43920 106 aa8.63□□□□□ -1.03
CHERP-204ENST00000546538 IGKV2-30P06310 120 aa8.63□□□□□ -1.03
CHERP-204ENST00000546538 LINC00643Q86TS7 51 aa8.6□□□□□ -1.03
CHERP-204ENST00000546538 C7orf65Q6ZTY9 151 aa8.58□□□□□ -1.04
CHERP-204ENST00000546538 Q8N9L7 120 aa8.58□□□□□ -1.04
CHERP-204ENST00000546538 ATP5EP2Q5VTU8 51 aa8.57□□□□□ -1.04
CHERP-204ENST00000546538 BPY2O14599 106 aa8.54□□□□□ -1.04
CHERP-204ENST00000546538 C4orf26Q17RF5 130 aa8.54□□□□□ -1.04
CHERP-204ENST00000546538 CXCL6P80162 114 aa8.52□□□□□ -1.05
CHERP-204ENST00000546538 KRTAP3-1Q9BYR8 98 aa8.51□□□□□ -1.05
CHERP-204ENST00000546538 HCG22E2RYF7 251 aa8.5□□□□□ -1.05
CHERP-204ENST00000546538 NEBP20929 6669 aa8.49□□□□□ -1.05
CHERP-204ENST00000546538 MT1BP07438 61 aa8.49□□□□□ -1.05
CHERP-204ENST00000546538 CASC2Q6XLA1 102 aa8.49□□□□□ -1.05
CHERP-204ENST00000546538 MT-ATP8P03928 68 aa8.46□□□□□ -1.05
CHERP-204ENST00000546538 C5orf47Q569G3 176 aa8.46□□□□□ -1.05
CHERP-204ENST00000546538 MUC12Q9UKN1 5478 aa8.44□□□□□ -1.06
CHERP-204ENST00000546538 IMUPQ9GZP8 106 aa8.43□□□□□ -1.06
CHERP-204ENST00000546538 HIST1H4AP62805 103 aaKnown RBP8.42□□□□□ -1.06
CHERP-204ENST00000546538 KRTAP19-8Q3LI54 63 aa8.39□□□□□ -1.07
CHERP-204ENST00000546538 SPRR2GQ9BYE4 73 aa8.38□□□□□ -1.07
CHERP-204ENST00000546538 A6NN06 94 aa8.37□□□□□ -1.07
CHERP-204ENST00000546538 FAM236AA0A1B0GUQ0 79 aa8.36□□□□□ -1.07
CHERP-204ENST00000546538 FAM236BA0A1B0GV22 79 aa8.36□□□□□ -1.07
CHERP-204ENST00000546538 LCA10Q71F78 164 aa8.36□□□□□ -1.07
CHERP-204ENST00000546538 S4R3F8 94 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms