RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 DSCR10P59022 87 aa4.84□□□□□ -1.63
YBX3-218ENST00000546298 LINC00313P59037 77 aa4.84□□□□□ -1.63
YBX3-218ENST00000546298 IGKV4-1P06312 121 aa4.83□□□□□ -1.64
YBX3-218ENST00000546298 C21orf62-AS1Q17RA5 79 aa4.83□□□□□ -1.64
YBX3-218ENST00000546298 UQCR10Q9UDW1 63 aa4.83□□□□□ -1.64
YBX3-218ENST00000546298 K7ERJ3 54 aa4.82□□□□□ -1.64
YBX3-218ENST00000546298 TRACP01848 142 aa4.82□□□□□ -1.64
YBX3-218ENST00000546298 UBE2V1Q13404 147 aa4.82□□□□□ -1.64
YBX3-218ENST00000546298 A0A1B0GV72 72 aa4.81□□□□□ -1.64
YBX3-218ENST00000546298 CCKP06307 115 aa4.81□□□□□ -1.64
YBX3-218ENST00000546298 SCGB1C2P0DMR2 95 aa4.81□□□□□ -1.64
YBX3-218ENST00000546298 COL5A1-AS1Q5SY13 56 aa4.81□□□□□ -1.64
YBX3-218ENST00000546298 LINC00472Q9H8W2 130 aa4.79□□□□□ -1.64
YBX3-218ENST00000546298 RBM3P98179 157 aaKnown RBP4.78□□□□□ -1.64
YBX3-218ENST00000546298 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
YBX3-218ENST00000546298 IGHV6-1A0A0B4J1U7 121 aa4.77□□□□□ -1.65
YBX3-218ENST00000546298 KRTAP16-1A8MUX0 517 aa4.77□□□□□ -1.65
YBX3-218ENST00000546298 DEFB116Q30KQ4 102 aa4.77□□□□□ -1.65
YBX3-218ENST00000546298 DSCR8Q96T75 97 aa4.77□□□□□ -1.65
YBX3-218ENST00000546298 VPS25Q9BRG1 176 aa4.77□□□□□ -1.65
YBX3-218ENST00000546298 FAM236DA0A1B0GTK5 79 aa4.76□□□□□ -1.65
YBX3-218ENST00000546298 C8orf87E5RJ46 101 aa4.76□□□□□ -1.65
YBX3-218ENST00000546298 FAM236CP0DP71 79 aa4.76□□□□□ -1.65
YBX3-218ENST00000546298 BAALC-AS2P0C853 105 aa4.75□□□□□ -1.65
YBX3-218ENST00000546298 BATFQ16520 125 aa4.75□□□□□ -1.65
YBX3-218ENST00000546298 NOTCH2NLQ7Z3S9 236 aa4.75□□□□□ -1.65
YBX3-218ENST00000546298 RBM12B-AS1Q9P1G2 102 aa4.75□□□□□ -1.65
YBX3-218ENST00000546298 C9JAW5 83 aa4.74□□□□□ -1.65
YBX3-218ENST00000546298 J3KT08 172 aa4.74□□□□□ -1.65
YBX3-218ENST00000546298 A0A1B0GVX0 72 aa4.73□□□□□ -1.65
YBX3-218ENST00000546298 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
YBX3-218ENST00000546298 NDUFB1O75438 58 aa4.72□□□□□ -1.65
YBX3-218ENST00000546298 PCP4P48539 62 aa4.72□□□□□ -1.65
YBX3-218ENST00000546298 FSIP2Q5CZC0 6907 aa4.72□□□□□ -1.65
YBX3-218ENST00000546298 JMJD7-PLA2G4BH0Y9G9 81 aa4.71□□□□□ -1.66
YBX3-218ENST00000546298 A0A1B0GW54 56 aa4.7□□□□□ -1.66
YBX3-218ENST00000546298 HRES1P13985 223 aa4.7□□□□□ -1.66
YBX3-218ENST00000546298 ATXN8Q156A1 80 aa4.7□□□□□ -1.66
YBX3-218ENST00000546298 Q6ZQT0 140 aa4.7□□□□□ -1.66
YBX3-218ENST00000546298 MTURNQ8N3F0 131 aa4.7□□□□□ -1.66
YBX3-218ENST00000546298 MPLKIPQ8TAP9 179 aa4.7□□□□□ -1.66
YBX3-218ENST00000546298 PDE6GP18545 87 aa4.69□□□□□ -1.66
YBX3-218ENST00000546298 ZCCHC13Q8WW36 166 aaKnown RBP4.68□□□□□ -1.66
YBX3-218ENST00000546298 LOC110117498A0A087WWA1 95 aa4.67□□□□□ -1.66
YBX3-218ENST00000546298 A8MWP4 228 aa4.66□□□□□ -1.66
YBX3-218ENST00000546298 LYRM7Q5U5X0 104 aa4.66□□□□□ -1.66
YBX3-218ENST00000546298 TAX1BP3O14907 124 aa4.65□□□□□ -1.67
YBX3-218ENST00000546298 SPINK7P58062 85 aa4.65□□□□□ -1.67
YBX3-218ENST00000546298 Q8N9P0 234 aaPredicted RBP4.65□□□□□ -1.67
YBX3-218ENST00000546298 FLGP20930 4061 aaPredicted RBP4.65□□□□□ -1.67
YBX3-218ENST00000546298 K7ERU9 68 aa4.64□□□□□ -1.67
YBX3-218ENST00000546298 NAA38Q9BRA0 125 aaKnown RBP4.64□□□□□ -1.67
YBX3-218ENST00000546298 C8orf17Q9NRJ1 99 aa4.64□□□□□ -1.67
YBX3-218ENST00000546298 MT2AP02795 61 aa4.63□□□□□ -1.67
YBX3-218ENST00000546298 C14orf132Q9NPU4 83 aa4.63□□□□□ -1.67
YBX3-218ENST00000546298 IGKV3D-7A0A0C4DH55 119 aa4.62□□□□□ -1.67
YBX3-218ENST00000546298 NREPQ16612 68 aa4.62□□□□□ -1.67
YBX3-218ENST00000546298 GTF2H5Q6ZYL4 71 aa4.62□□□□□ -1.67
YBX3-218ENST00000546298 H3BS24 57 aa4.61□□□□□ -1.67
YBX3-218ENST00000546298 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
YBX3-218ENST00000546298 Q6ZVQ6 151 aa4.61□□□□□ -1.67
YBX3-218ENST00000546298 PRR15Q8IV56 129 aa4.6□□□□□ -1.67
YBX3-218ENST00000546298 C9orf118A6NHY6 69 aa4.59□□□□□ -1.67
YBX3-218ENST00000546298 K7EP34 96 aa4.59□□□□□ -1.67
YBX3-218ENST00000546298 MT1FP04733 61 aa4.59□□□□□ -1.67
YBX3-218ENST00000546298 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
YBX3-218ENST00000546298 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
YBX3-218ENST00000546298 TMEM254Q8TBM7 123 aa4.58□□□□□ -1.68
YBX3-218ENST00000546298 WFDC13Q8IUB5 93 aa4.57□□□□□ -1.68
YBX3-218ENST00000546298 MRPL34Q9BQ48 92 aaKnown RBP4.57□□□□□ -1.68
YBX3-218ENST00000546298 H3BT86 120 aa4.56□□□□□ -1.68
YBX3-218ENST00000546298 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
YBX3-218ENST00000546298 A0A1W2PPM0 123 aa4.55□□□□□ -1.68
YBX3-218ENST00000546298 SCGB1A1P11684 91 aa4.55□□□□□ -1.68
YBX3-218ENST00000546298 SPCS1Q9Y6A9 102 aa4.55□□□□□ -1.68
YBX3-218ENST00000546298 MMP24-AS1A0A0U1RRL7 71 aa4.54□□□□□ -1.68
YBX3-218ENST00000546298 hDV103S1A0JD37 113 aa4.54□□□□□ -1.68
YBX3-218ENST00000546298 NDUFS5O43920 106 aa4.54□□□□□ -1.68
YBX3-218ENST00000546298 J3QR89 54 aa4.53□□□□□ -1.68
YBX3-218ENST00000546298 BPY2O14599 106 aa4.53□□□□□ -1.68
YBX3-218ENST00000546298 K7EQZ3 153 aa4.52□□□□□ -1.69
YBX3-218ENST00000546298 LINC00846Q9NV44 126 aa4.52□□□□□ -1.69
YBX3-218ENST00000546298 F8W1H4 67 aa4.5□□□□□ -1.69
YBX3-218ENST00000546298 H1FX-AS1Q4G0G2 97 aa4.5□□□□□ -1.69
YBX3-218ENST00000546298 IGKV2D-30A0A075B6S6 120 aa4.48□□□□□ -1.69
YBX3-218ENST00000546298 IGKV2-30P06310 120 aa4.48□□□□□ -1.69
YBX3-218ENST00000546298 C7orf65Q6ZTY9 151 aa4.48□□□□□ -1.69
YBX3-218ENST00000546298 CASC2Q6XLA1 102 aa4.47□□□□□ -1.69
YBX3-218ENST00000546298 Q5W150 140 aa4.45□□□□□ -1.7
YBX3-218ENST00000546298 USH2AO75445 5202 aa4.45□□□□□ -1.7
YBX3-218ENST00000546298 HCG22E2RYF7 251 aa4.44□□□□□ -1.7
YBX3-218ENST00000546298 CXCL6P80162 114 aa4.44□□□□□ -1.7
YBX3-218ENST00000546298 Q8N9L7 120 aa4.43□□□□□ -1.7
YBX3-218ENST00000546298 UBL5Q9BZL1 73 aa4.43□□□□□ -1.7
YBX3-218ENST00000546298 PRO0461Q9UI25 63 aa4.43□□□□□ -1.7
YBX3-218ENST00000546298 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
YBX3-218ENST00000546298 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
YBX3-218ENST00000546298 ETDBQ3ZM63 59 aa4.4□□□□□ -1.71
YBX3-218ENST00000546298 C4orf26Q17RF5 130 aa4.39□□□□□ -1.71
YBX3-218ENST00000546298 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 311 ms