RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 DEFB116Q30KQ4 102 aa6.42□□□□□ -1.38
SNHG1-221ENST00000544983 UBL5Q9BZL1 73 aa6.42□□□□□ -1.38
SNHG1-221ENST00000544983 LPAP08519 4548 aa6.42□□□□□ -1.38
SNHG1-221ENST00000544983 C8orf87E5RJ46 101 aa6.41□□□□□ -1.38
SNHG1-221ENST00000544983 LINC00313P59037 77 aa6.41□□□□□ -1.38
SNHG1-221ENST00000544983 SEC61BP60468 96 aaKnown RBP6.41□□□□□ -1.38
SNHG1-221ENST00000544983 FAT4Q6V0I7 4981 aa6.4□□□□□ -1.38
SNHG1-221ENST00000544983 A0A1B0GVX0 72 aa6.4□□□□□ -1.38
SNHG1-221ENST00000544983 A8MWP4 228 aa6.4□□□□□ -1.38
SNHG1-221ENST00000544983 ACYP1P07311 99 aa6.4□□□□□ -1.38
SNHG1-221ENST00000544983 BPY2O14599 106 aa6.39□□□□□ -1.39
SNHG1-221ENST00000544983 Q6ZVQ6 151 aa6.39□□□□□ -1.39
SNHG1-221ENST00000544983 IGHV6-1A0A0B4J1U7 121 aa6.38□□□□□ -1.39
SNHG1-221ENST00000544983 FAM240AA0A1B0GVK7 77 aa6.38□□□□□ -1.39
SNHG1-221ENST00000544983 LINC00846Q9NV44 126 aa6.38□□□□□ -1.39
SNHG1-221ENST00000544983 Q75L30 129 aa6.36□□□□□ -1.39
SNHG1-221ENST00000544983 PRR15Q8IV56 129 aa6.36□□□□□ -1.39
SNHG1-221ENST00000544983 DSCR10P59022 87 aa6.35□□□□□ -1.39
SNHG1-221ENST00000544983 RPL37P61927 97 aaKnown RBP6.35□□□□□ -1.39
SNHG1-221ENST00000544983 C20orf166-AS1Q96NR2 134 aa6.35□□□□□ -1.39
SNHG1-221ENST00000544983 MUC2Q02817 5179 aa6.35□□□□□ -1.39
SNHG1-221ENST00000544983 IGKV3D-7A0A0C4DH55 119 aa6.34□□□□□ -1.39
SNHG1-221ENST00000544983 A8MUU9 505 aa6.33□□□□□ -1.4
SNHG1-221ENST00000544983 J3QR89 54 aa6.33□□□□□ -1.4
SNHG1-221ENST00000544983 KRTAP16-1A8MUX0 517 aa6.31□□□□□ -1.4
SNHG1-221ENST00000544983 CXCL6P80162 114 aa6.31□□□□□ -1.4
SNHG1-221ENST00000544983 ATP11AUNQ6ZP68 121 aa6.31□□□□□ -1.4
SNHG1-221ENST00000544983 C8orf17Q9NRJ1 99 aa6.31□□□□□ -1.4
SNHG1-221ENST00000544983 NOTCH2NLQ7Z3S9 236 aa6.3□□□□□ -1.4
SNHG1-221ENST00000544983 K7EQZ3 153 aa6.29□□□□□ -1.4
SNHG1-221ENST00000544983 PCOTHQ58A44 107 aa6.28□□□□□ -1.4
SNHG1-221ENST00000544983 ATP5EP2Q5VTU8 51 aa6.28□□□□□ -1.4
SNHG1-221ENST00000544983 hDV103S1A0JD37 113 aa6.26□□□□□ -1.41
SNHG1-221ENST00000544983 Q8N9P0 234 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-221ENST00000544983 TMEM254Q8TBM7 123 aa6.26□□□□□ -1.41
SNHG1-221ENST00000544983 MMP24-AS1A0A0U1RRL7 71 aa6.25□□□□□ -1.41
SNHG1-221ENST00000544983 MRPL34Q9BQ48 92 aaKnown RBP6.24□□□□□ -1.41
SNHG1-221ENST00000544983 CRCT1Q9UGL9 99 aa6.24□□□□□ -1.41
SNHG1-221ENST00000544983 A0A0U1RQV1 116 aa6.23□□□□□ -1.41
SNHG1-221ENST00000544983 LINC00643Q86TS7 51 aa6.23□□□□□ -1.41
SNHG1-221ENST00000544983 Q8N9L7 120 aa6.23□□□□□ -1.41
SNHG1-221ENST00000544983 LCE2AQ5TA79 106 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-221ENST00000544983 MUC17Q685J3 4493 aa6.22□□□□□ -1.41
SNHG1-221ENST00000544983 K7ERU9 68 aa6.21□□□□□ -1.42
SNHG1-221ENST00000544983 CASC2Q6XLA1 102 aa6.21□□□□□ -1.42
SNHG1-221ENST00000544983 FSIP2Q5CZC0 6907 aa6.2□□□□□ -1.42
SNHG1-221ENST00000544983 HCG22E2RYF7 251 aa6.2□□□□□ -1.42
SNHG1-221ENST00000544983 ZCCHC13Q8WW36 166 aaKnown RBP6.18□□□□□ -1.42
SNHG1-221ENST00000544983 WFDC13Q8IUB5 93 aa6.17□□□□□ -1.42
SNHG1-221ENST00000544983 KRTAP4-1Q9BYQ7 146 aa6.17□□□□□ -1.42
SNHG1-221ENST00000544983 NDUFS5O43920 106 aa6.16□□□□□ -1.42
SNHG1-221ENST00000544983 HIST1H4AP62805 103 aaKnown RBP6.13□□□□□ -1.43
SNHG1-221ENST00000544983 TP53AIP1Q9HCN2 124 aa6.13□□□□□ -1.43
SNHG1-221ENST00000544983 IMUPQ9GZP8 106 aa6.08□□□□□ -1.44
SNHG1-221ENST00000544983 SPINK7P58062 85 aa6.06□□□□□ -1.44
SNHG1-221ENST00000544983 LCE2BO14633 110 aa6.04□□□□□ -1.44
SNHG1-221ENST00000544983 Q5W150 140 aa6.04□□□□□ -1.44
SNHG1-221ENST00000544983 A0A087WVE0 104 aa6.03□□□□□ -1.44
SNHG1-221ENST00000544983 RBM12B-AS1Q9P1G2 102 aa6.03□□□□□ -1.44
SNHG1-221ENST00000544983 COX6B2Q6YFQ2 88 aa6.02□□□□□ -1.45
SNHG1-221ENST00000544983 C7orf65Q6ZTY9 151 aa6.02□□□□□ -1.45
SNHG1-221ENST00000544983 UQCRQO14949 82 aa6.01□□□□□ -1.45
SNHG1-221ENST00000544983 KRTAP19-2Q3LHN2 52 aa6.01□□□□□ -1.45
SNHG1-221ENST00000544983 HRES1P13985 223 aa6□□□□□ -1.45
SNHG1-221ENST00000544983 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
SNHG1-221ENST00000544983 TRAV22A0A0B4J277 110 aa5.99□□□□□ -1.45
SNHG1-221ENST00000544983 IGKV2D-30A0A075B6S6 120 aa5.98□□□□□ -1.45
SNHG1-221ENST00000544983 KRTAP9-7A8MTY7 169 aa5.98□□□□□ -1.45
SNHG1-221ENST00000544983 MT-ATP8P03928 68 aa5.98□□□□□ -1.45
SNHG1-221ENST00000544983 IGKV2-30P06310 120 aa5.98□□□□□ -1.45
SNHG1-221ENST00000544983 LCE2CQ5TA81 110 aa5.98□□□□□ -1.45
SNHG1-221ENST00000544983 ATOX1O00244 68 aa5.97□□□□□ -1.45
SNHG1-221ENST00000544983 SCGB1A1P11684 91 aa5.96□□□□□ -1.46
SNHG1-221ENST00000544983 FAM236DA0A1B0GTK5 79 aa5.95□□□□□ -1.46
SNHG1-221ENST00000544983 FAM236CP0DP71 79 aa5.95□□□□□ -1.46
SNHG1-221ENST00000544983 OCR1Q9BZK8 76 aa5.95□□□□□ -1.46
SNHG1-221ENST00000544983 LOC101927531A0A1B0GV80 90 aa5.94□□□□□ -1.46
SNHG1-221ENST00000544983 C5orf47Q569G3 176 aa5.92□□□□□ -1.46
SNHG1-221ENST00000544983 SMIM20Q8N5G0 67 aa5.92□□□□□ -1.46
SNHG1-221ENST00000544983 H0Y9P7 68 aa5.91□□□□□ -1.46
SNHG1-221ENST00000544983 MP68P56378 58 aa5.91□□□□□ -1.46
SNHG1-221ENST00000544983 CYP4F30PQ9H0H9 118 aa5.9□□□□□ -1.46
SNHG1-221ENST00000544983 H3BPC8 53 aa5.89□□□□□ -1.47
SNHG1-221ENST00000544983 MT1HP80294 61 aa5.89□□□□□ -1.47
SNHG1-221ENST00000544983 FLGP20930 4061 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-221ENST00000544983 FAM236AA0A1B0GUQ0 79 aa5.88□□□□□ -1.47
SNHG1-221ENST00000544983 FAM236BA0A1B0GV22 79 aa5.88□□□□□ -1.47
SNHG1-221ENST00000544983 C1orf64Q8NEQ6 169 aa5.86□□□□□ -1.47
SNHG1-221ENST00000544983 M0R2T5 61 aa5.85□□□□□ -1.47
SNHG1-221ENST00000544983 LINC00208Q96KT6 92 aa5.85□□□□□ -1.47
SNHG1-221ENST00000544983 TRAV7A0A075B6U4 112 aa5.84□□□□□ -1.47
SNHG1-221ENST00000544983 C4orf26Q17RF5 130 aa5.84□□□□□ -1.47
SNHG1-221ENST00000544983 H1FX-AS1Q4G0G2 97 aa5.84□□□□□ -1.47
SNHG1-221ENST00000544983 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-221ENST00000544983 SERP2Q8N6R1 65 aa5.76□□□□□ -1.49
SNHG1-221ENST00000544983 A8MUN3 132 aa5.75□□□□□ -1.49
SNHG1-221ENST00000544983 KRTAP10-6P60371 365 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-221ENST00000544983 LORP23490 312 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-221ENST00000544983 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
SNHG1-221ENST00000544983 KLKP1Q107X0 134 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms