RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 MPLKIPQ8TAP9 179 aa6.63□□□□□ -1.35
TNFRSF1A-215ENST00000543359 IGHV6-1A0A0B4J1U7 121 aa6.62□□□□□ -1.35
TNFRSF1A-215ENST00000543359 KRTAP9-8Q9BYQ0 159 aa6.62□□□□□ -1.35
TNFRSF1A-215ENST00000543359 COL5A1-AS1Q5SY13 56 aa6.61□□□□□ -1.35
TNFRSF1A-215ENST00000543359 DSCR8Q96T75 97 aa6.61□□□□□ -1.35
TNFRSF1A-215ENST00000543359 VPS25Q9BRG1 176 aa6.61□□□□□ -1.35
TNFRSF1A-215ENST00000543359 TRBV20-1A0A075B6N2 111 aa6.6□□□□□ -1.35
TNFRSF1A-215ENST00000543359 A0A1B0GVX0 72 aa6.6□□□□□ -1.35
TNFRSF1A-215ENST00000543359 HRES1P13985 223 aa6.6□□□□□ -1.35
TNFRSF1A-215ENST00000543359 Q6ZQT0 140 aa6.6□□□□□ -1.35
TNFRSF1A-215ENST00000543359 C9JAW5 83 aa6.59□□□□□ -1.35
TNFRSF1A-215ENST00000543359 NAA38Q9BRA0 125 aaKnown RBP6.59□□□□□ -1.35
TNFRSF1A-215ENST00000543359 C8orf87E5RJ46 101 aa6.58□□□□□ -1.36
TNFRSF1A-215ENST00000543359 USH2AO75445 5202 aa6.57□□□□□ -1.36
TNFRSF1A-215ENST00000543359 ATXN8Q156A1 80 aa6.56□□□□□ -1.36
TNFRSF1A-215ENST00000543359 BATFQ16520 125 aa6.56□□□□□ -1.36
TNFRSF1A-215ENST00000543359 LOC110117498A0A087WWA1 95 aa6.55□□□□□ -1.36
TNFRSF1A-215ENST00000543359 C21orf62-AS1Q17RA5 79 aa6.55□□□□□ -1.36
TNFRSF1A-215ENST00000543359 J3KT08 172 aa6.54□□□□□ -1.36
TNFRSF1A-215ENST00000543359 JMJD7-PLA2G4BH0Y9G9 81 aa6.53□□□□□ -1.36
TNFRSF1A-215ENST00000543359 SSPOA2VEC9 5147 aa6.53□□□□□ -1.36
TNFRSF1A-215ENST00000543359 A0A1B0GW54 56 aa6.52□□□□□ -1.37
TNFRSF1A-215ENST00000543359 Q8N9P0 234 aaPredicted RBP6.51□□□□□ -1.37
TNFRSF1A-215ENST00000543359 ZCCHC13Q8WW36 166 aaKnown RBP6.51□□□□□ -1.37
TNFRSF1A-215ENST00000543359 TAX1BP3O14907 124 aa6.5□□□□□ -1.37
TNFRSF1A-215ENST00000543359 IGKV3D-7A0A0C4DH55 119 aa6.49□□□□□ -1.37
TNFRSF1A-215ENST00000543359 A8MWP4 228 aa6.49□□□□□ -1.37
TNFRSF1A-215ENST00000543359 MT2AP02795 61 aa6.49□□□□□ -1.37
TNFRSF1A-215ENST00000543359 PDE6GP18545 87 aa6.49□□□□□ -1.37
TNFRSF1A-215ENST00000543359 C14orf132Q9NPU4 83 aa6.49□□□□□ -1.37
TNFRSF1A-215ENST00000543359 RBM12B-AS1Q9P1G2 102 aa6.49□□□□□ -1.37
TNFRSF1A-215ENST00000543359 FAM236DA0A1B0GTK5 79 aa6.48□□□□□ -1.37
TNFRSF1A-215ENST00000543359 FAM236CP0DP71 79 aa6.48□□□□□ -1.37
TNFRSF1A-215ENST00000543359 C8orf17Q9NRJ1 99 aa6.48□□□□□ -1.37
TNFRSF1A-215ENST00000543359 NDUFB1O75438 58 aa6.47□□□□□ -1.37
TNFRSF1A-215ENST00000543359 SPINK7P58062 85 aa6.46□□□□□ -1.38
TNFRSF1A-215ENST00000543359 MT1FP04733 61 aa6.45□□□□□ -1.38
TNFRSF1A-215ENST00000543359 LYRM7Q5U5X0 104 aa6.44□□□□□ -1.38
TNFRSF1A-215ENST00000543359 PRR15Q8IV56 129 aa6.44□□□□□ -1.38
TNFRSF1A-215ENST00000543359 C9orf118A6NHY6 69 aa6.42□□□□□ -1.38
TNFRSF1A-215ENST00000543359 Q6ZVQ6 151 aa6.42□□□□□ -1.38
TNFRSF1A-215ENST00000543359 KRTAP9-3Q9BYQ3 159 aa6.42□□□□□ -1.38
TNFRSF1A-215ENST00000543359 NREPQ16612 68 aa6.41□□□□□ -1.38
TNFRSF1A-215ENST00000543359 MMP24-AS1A0A0U1RRL7 71 aa6.4□□□□□ -1.38
TNFRSF1A-215ENST00000543359 A0A1W2PPM0 123 aa6.39□□□□□ -1.39
TNFRSF1A-215ENST00000543359 H3BT86 120 aa6.39□□□□□ -1.39
TNFRSF1A-215ENST00000543359 MTURNQ8N3F0 131 aa6.37□□□□□ -1.39
TNFRSF1A-215ENST00000543359 TMEM254Q8TBM7 123 aa6.37□□□□□ -1.39
TNFRSF1A-215ENST00000543359 K7EP34 96 aa6.36□□□□□ -1.39
TNFRSF1A-215ENST00000543359 KRTAP10-10P60014 251 aa6.36□□□□□ -1.39
TNFRSF1A-215ENST00000543359 MRPL34Q9BQ48 92 aaKnown RBP6.36□□□□□ -1.39
TNFRSF1A-215ENST00000543359 K7EQZ3 153 aa6.35□□□□□ -1.39
TNFRSF1A-215ENST00000543359 WFDC13Q8IUB5 93 aa6.35□□□□□ -1.39
TNFRSF1A-215ENST00000543359 GTF2H5Q6ZYL4 71 aa6.34□□□□□ -1.39
TNFRSF1A-215ENST00000543359 FCGBPQ9Y6R7 5405 aaPredicted RBP6.33□□□□□ -1.4
TNFRSF1A-215ENST00000543359 hDV103S1A0JD37 113 aa6.32□□□□□ -1.4
TNFRSF1A-215ENST00000543359 SPCS1Q9Y6A9 102 aa6.31□□□□□ -1.4
TNFRSF1A-215ENST00000543359 BPY2O14599 106 aa6.29□□□□□ -1.4
TNFRSF1A-215ENST00000543359 Q5W150 140 aa6.29□□□□□ -1.4
TNFRSF1A-215ENST00000543359 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
TNFRSF1A-215ENST00000543359 KRTAP19-1Q8IUB9 90 aa6.26□□□□□ -1.41
TNFRSF1A-215ENST00000543359 Q8N9L7 120 aa6.26□□□□□ -1.41
TNFRSF1A-215ENST00000543359 PRO0461Q9UI25 63 aa6.26□□□□□ -1.41
TNFRSF1A-215ENST00000543359 NDUFS5O43920 106 aa6.25□□□□□ -1.41
TNFRSF1A-215ENST00000543359 F8W1H4 67 aa6.24□□□□□ -1.41
TNFRSF1A-215ENST00000543359 H1FX-AS1Q4G0G2 97 aa6.24□□□□□ -1.41
TNFRSF1A-215ENST00000543359 K7ERU9 68 aa6.22□□□□□ -1.41
TNFRSF1A-215ENST00000543359 IGKV2D-30A0A075B6S6 120 aa6.21□□□□□ -1.42
TNFRSF1A-215ENST00000543359 IGKV2-30P06310 120 aa6.21□□□□□ -1.42
TNFRSF1A-215ENST00000543359 CASC2Q6XLA1 102 aa6.21□□□□□ -1.42
TNFRSF1A-215ENST00000543359 LINC00846Q9NV44 126 aa6.2□□□□□ -1.42
TNFRSF1A-215ENST00000543359 KRTAP9-7A8MTY7 169 aa6.19□□□□□ -1.42
TNFRSF1A-215ENST00000543359 HCG22E2RYF7 251 aa6.19□□□□□ -1.42
TNFRSF1A-215ENST00000543359 C7orf65Q6ZTY9 151 aa6.18□□□□□ -1.42
TNFRSF1A-215ENST00000543359 LOC100996750A0A140TA64 210 aa6.17□□□□□ -1.42
TNFRSF1A-215ENST00000543359 KRTAP4-6Q9BYQ5 205 aa6.17□□□□□ -1.42
TNFRSF1A-215ENST00000543359 CXCL6P80162 114 aa6.15□□□□□ -1.42
TNFRSF1A-215ENST00000543359 KRTAP19-6Q3LI70 58 aa6.15□□□□□ -1.42
TNFRSF1A-215ENST00000543359 UBL5Q9BZL1 73 aa6.14□□□□□ -1.43
TNFRSF1A-215ENST00000543359 C4orf26Q17RF5 130 aa6.13□□□□□ -1.43
TNFRSF1A-215ENST00000543359 ETDBQ3ZM63 59 aa6.13□□□□□ -1.43
TNFRSF1A-215ENST00000543359 KRTAP3-1Q9BYR8 98 aa6.12□□□□□ -1.43
TNFRSF1A-215ENST00000543359 J3QR89 54 aa6.11□□□□□ -1.43
TNFRSF1A-215ENST00000543359 MACF1Q9UPN3 7388 aaKnown RBP6.07□□□□□ -1.44
TNFRSF1A-215ENST00000543359 PCP4P48539 62 aa6.05□□□□□ -1.44
TNFRSF1A-215ENST00000543359 SYNE2Q8WXH0 6885 aaKnown RBP6.03□□□□□ -1.44
TNFRSF1A-215ENST00000543359 SCGB1A1P11684 91 aa6.01□□□□□ -1.45
TNFRSF1A-215ENST00000543359 TP53AIP1Q9HCN2 124 aa6.01□□□□□ -1.45
TNFRSF1A-215ENST00000543359 C5orf47Q569G3 176 aa6□□□□□ -1.45
TNFRSF1A-215ENST00000543359 C1orf64Q8NEQ6 169 aa6□□□□□ -1.45
TNFRSF1A-215ENST00000543359 LCA10Q71F78 164 aa5.97□□□□□ -1.45
TNFRSF1A-215ENST00000543359 S4R3F8 94 aa5.97□□□□□ -1.45
TNFRSF1A-215ENST00000543359 FAM240AA0A1B0GVK7 77 aa5.95□□□□□ -1.46
TNFRSF1A-215ENST00000543359 CSAG1Q6PB30 78 aa5.95□□□□□ -1.46
TNFRSF1A-215ENST00000543359 CYP4F30PQ9H0H9 118 aa5.95□□□□□ -1.46
TNFRSF1A-215ENST00000543359 MT-ATP8P03928 68 aa5.93□□□□□ -1.46
TNFRSF1A-215ENST00000543359 MT1BP07438 61 aa5.92□□□□□ -1.46
TNFRSF1A-215ENST00000543359 ACYP1P07311 99 aa5.91□□□□□ -1.46
TNFRSF1A-215ENST00000543359 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
TNFRSF1A-215ENST00000543359 FAM236AA0A1B0GUQ0 79 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms