RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 C8orf17Q9NRJ1 99 aa12.03□□□□□ -0.48
ME3-212ENST00000543262 MPLKIPQ8TAP9 179 aa12.03□□□□□ -0.48
ME3-212ENST00000543262 PKHD1P08F94 4074 aa12.02□□□□□ -0.49
ME3-212ENST00000543262 ASB16-AS1Q495Z4 193 aa12.02□□□□□ -0.49
ME3-212ENST00000543262 VPS13BQ7Z7G8 4022 aa12.01□□□□□ -0.49
ME3-212ENST00000543262 MP68P56378 58 aa12.01□□□□□ -0.49
ME3-212ENST00000543262 FAM229BQ4G0N7 80 aa12□□□□□ -0.49
ME3-212ENST00000543262 SPINK6Q6UWN8 80 aa12□□□□□ -0.49
ME3-212ENST00000543262 KRTAP1-4P0C5Y4 121 aa11.98□□□□□ -0.49
ME3-212ENST00000543262 H0Y9P7 68 aa11.97□□□□□ -0.49
ME3-212ENST00000543262 LINC00208Q96KT6 92 aa11.97□□□□□ -0.49
ME3-212ENST00000543262 NOTCH2NLQ7Z3S9 236 aa11.95□□□□□ -0.5
ME3-212ENST00000543262 A0A1B0GVY2 172 aa11.91□□□□□ -0.5
ME3-212ENST00000543262 TRAV22A0A0B4J277 110 aa11.9□□□□□ -0.5
ME3-212ENST00000543262 H3BPC8 53 aa11.9□□□□□ -0.5
ME3-212ENST00000543262 TP53AIP1Q9HCN2 124 aa11.89□□□□□ -0.51
ME3-212ENST00000543262 PLA2G1BP04054 148 aaKnown RBP11.89□□□□□ -0.51
ME3-212ENST00000543262 MRPL34Q9BQ48 92 aaKnown RBP11.89□□□□□ -0.51
ME3-212ENST00000543262 NDUFS5O43920 106 aa11.87□□□□□ -0.51
ME3-212ENST00000543262 C1orf64Q8NEQ6 169 aa11.87□□□□□ -0.51
ME3-212ENST00000543262 DYNC1H1Q14204 4646 aaKnown RBP11.84□□□□□ -0.51
ME3-212ENST00000543262 SMR3BP02814 79 aaPredicted RBP11.84□□□□□ -0.51
ME3-212ENST00000543262 PMAIP1Q13794 54 aa11.82□□□□□ -0.52
ME3-212ENST00000543262 TYMSOSQ8TAI1 123 aa11.81□□□□□ -0.52
ME3-212ENST00000543262 RYR2Q92736 4967 aa11.81□□□□□ -0.52
ME3-212ENST00000543262 PRR4Q16378 134 aa11.8□□□□□ -0.52
ME3-212ENST00000543262 C8orf87E5RJ46 101 aa11.77□□□□□ -0.52
ME3-212ENST00000543262 LIMD2Q9BT23 127 aa11.77□□□□□ -0.52
ME3-212ENST00000543262 C4orf48Q5BLP8 95 aa11.77□□□□□ -0.53
ME3-212ENST00000543262 CYP4F30PQ9H0H9 118 aa11.75□□□□□ -0.53
ME3-212ENST00000543262 LINC00313P59037 77 aa11.74□□□□□ -0.53
ME3-212ENST00000543262 PRR26Q8N8Z3 221 aa11.73□□□□□ -0.53
ME3-212ENST00000543262 KMT2CQ8NEZ4 4911 aaKnown RBP11.73□□□□□ -0.53
ME3-212ENST00000543262 SPANXA2-OT1Q8N9U9 137 aa11.71□□□□□ -0.53
ME3-212ENST00000543262 APOBP04114 4563 aaKnown RBP11.71□□□□□ -0.54
ME3-212ENST00000543262 SPINK1P00995 79 aa11.71□□□□□ -0.54
ME3-212ENST00000543262 KRTAP10-4P60372 401 aaPredicted RBP11.69□□□□□ -0.54
ME3-212ENST00000543262 Q5W150 140 aa11.69□□□□□ -0.54
ME3-212ENST00000543262 Q1T7F1 81 aa11.68□□□□□ -0.54
ME3-212ENST00000543262 PCOTHQ58A44 107 aa11.68□□□□□ -0.54
ME3-212ENST00000543262 LINC00304Q8N9R0 145 aa11.65□□□□□ -0.54
ME3-212ENST00000543262 KRTAP13-3Q3SY46 172 aa11.64□□□□□ -0.55
ME3-212ENST00000543262 FAT1Q14517 4588 aa11.64□□□□□ -0.55
ME3-212ENST00000543262 PSPHP1O15172 72 aa11.63□□□□□ -0.55
ME3-212ENST00000543262 Q8N9P0 234 aaPredicted RBP11.62□□□□□ -0.55
ME3-212ENST00000543262 IGLV7-46A0A075B6I9 117 aa11.61□□□□□ -0.55
ME3-212ENST00000543262 KRTAP16-1A8MUX0 517 aa11.6□□□□□ -0.55
ME3-212ENST00000543262 SPAG11AQ6PDA7 123 aa11.59□□□□□ -0.55
ME3-212ENST00000543262 LOC101927531A0A1B0GV80 90 aa11.58□□□□□ -0.56
ME3-212ENST00000543262 RPS29P62273 56 aaKnown RBP11.57□□□□□ -0.56
ME3-212ENST00000543262 FAM229AH3BQW9 127 aa11.53□□□□□ -0.56
ME3-212ENST00000543262 RETNLBQ9BQ08 111 aa11.53□□□□□ -0.56
ME3-212ENST00000543262 A8MUN3 132 aa11.48□□□□□ -0.57
ME3-212ENST00000543262 PKHD1L1Q86WI1 4243 aa11.47□□□□□ -0.57
ME3-212ENST00000543262 COA5Q86WW8 74 aa11.44□□□□□ -0.58
ME3-212ENST00000543262 A8MU10 97 aa11.41□□□□□ -0.58
ME3-212ENST00000543262 RYR3Q15413 4870 aa11.4□□□□□ -0.58
ME3-212ENST00000543262 IGKV2-30P06310 120 aa11.4□□□□□ -0.58
ME3-212ENST00000543262 Q5VV11 94 aa11.4□□□□□ -0.59
ME3-212ENST00000543262 KTN1-AS1Q86SY8 53 aa11.38□□□□□ -0.59
ME3-212ENST00000543262 HRES1P13985 223 aa11.36□□□□□ -0.59
ME3-212ENST00000543262 CHKB-CPT1BH3BT56 60 aa11.35□□□□□ -0.59
ME3-212ENST00000543262 RBM12B-AS1Q9P1G2 102 aa11.34□□□□□ -0.59
ME3-212ENST00000543262 Q5VSD8 79 aa11.34□□□□□ -0.59
ME3-212ENST00000543262 HSPG2P98160 4391 aa11.32□□□□□ -0.6
ME3-212ENST00000543262 SPTSSBQ8NFR3 76 aa11.31□□□□□ -0.6
ME3-212ENST00000543262 IGKV2D-30A0A075B6S6 120 aa11.31□□□□□ -0.6
ME3-212ENST00000543262 C9orf92A6NGG3 77 aa11.31□□□□□ -0.6
ME3-212ENST00000543262 PRR15LQ9BU68 103 aa11.27□□□□□ -0.6
ME3-212ENST00000543262 Q8N1X5 172 aa11.26□□□□□ -0.61
ME3-212ENST00000543262 FLG2Q5D862 2391 aaPredicted RBP11.26□□□□□ -0.61
ME3-212ENST00000543262 DMAC1Q96GE9 116 aa11.24□□□□□ -0.61
ME3-212ENST00000543262 ACYP2P14621 99 aa11.24□□□□□ -0.61
ME3-212ENST00000543262 KRTAP10-8P60410 259 aa11.24□□□□□ -0.61
ME3-212ENST00000543262 ATP11AUNQ6ZP68 121 aa11.23□□□□□ -0.61
ME3-212ENST00000543262 LRP1Q07954 4544 aaKnown RBP11.22□□□□□ -0.61
ME3-212ENST00000543262 KRTAP17-1Q9BYP8 105 aa11.22□□□□□ -0.61
ME3-212ENST00000543262 RYR1P21817 5038 aa11.21□□□□□ -0.61
ME3-212ENST00000543262 C20orf166-AS1Q96NR2 134 aa11.21□□□□□ -0.62
ME3-212ENST00000543262 A8MUU9 505 aa11.2□□□□□ -0.62
ME3-212ENST00000543262 TNXBP22105 4242 aa11.2□□□□□ -0.62
ME3-212ENST00000543262 A6NED7 52 aa11.19□□□□□ -0.62
ME3-212ENST00000543262 LCA10Q71F78 164 aa11.18□□□□□ -0.62
ME3-212ENST00000543262 Q75L30 129 aa11.17□□□□□ -0.62
ME3-212ENST00000543262 A6NN06 94 aa11.15□□□□□ -0.62
ME3-212ENST00000543262 C7orf65Q6ZTY9 151 aa11.15□□□□□ -0.62
ME3-212ENST00000543262 KIAA1109Q2LD37 5005 aa11.1□□□□□ -0.63
ME3-212ENST00000543262 FAT3Q8TDW7 4589 aa11.1□□□□□ -0.63
ME3-212ENST00000543262 LINC01558Q9Y6Z2 57 aa11.09□□□□□ -0.63
ME3-212ENST00000543262 CDC42SE1Q9NRR8 79 aa11.09□□□□□ -0.63
ME3-212ENST00000543262 DMBT1Q9UGM3 2413 aaPredicted RBP11.02□□□□□ -0.64
ME3-212ENST00000543262 EPPK1P58107 5090 aaKnown RBP11□□□□□ -0.65
ME3-212ENST00000543262 MT1HL1P0DM35 61 aa10.97□□□□□ -0.65
ME3-212ENST00000543262 SPINK7P58062 85 aa10.96□□□□□ -0.65
ME3-212ENST00000543262 MYCBP2O75592 4640 aa10.94□□□□□ -0.66
ME3-212ENST00000543262 KRTAP3-1Q9BYR8 98 aa10.85□□□□□ -0.67
ME3-212ENST00000543262 XP32Q5T750 250 aa10.84□□□□□ -0.67
ME3-212ENST00000543262 RPL37P61927 97 aaKnown RBP10.84□□□□□ -0.67
ME3-212ENST00000543262 A0A1B0GU69 56 aa10.8□□□□□ -0.68
ME3-212ENST00000543262 KRTAP4-5Q9BYR2 181 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms