RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 BRK1Q8WUW1 75 aa8.71□□□□□ -1.02
TSFM-207ENST00000540550 DYNC1H1Q14204 4646 aaKnown RBP8.71□□□□□ -1.02
TSFM-207ENST00000540550 A0A1B0GVX0 72 aa8.7□□□□□ -1.02
TSFM-207ENST00000540550 KRTAP1-4P0C5Y4 121 aa8.7□□□□□ -1.02
TSFM-207ENST00000540550 IGHV6-1A0A0B4J1U7 121 aa8.69□□□□□ -1.02
TSFM-207ENST00000540550 hDV103S1A0JD37 113 aa8.69□□□□□ -1.02
TSFM-207ENST00000540550 SPINK6Q6UWN8 80 aa8.68□□□□□ -1.02
TSFM-207ENST00000540550 C8orf17Q9NRJ1 99 aa8.68□□□□□ -1.02
TSFM-207ENST00000540550 PLA2G1BP04054 148 aaKnown RBP8.67□□□□□ -1.02
TSFM-207ENST00000540550 VPS13BQ7Z7G8 4022 aa8.67□□□□□ -1.02
TSFM-207ENST00000540550 ASB16-AS1Q495Z4 193 aa8.66□□□□□ -1.02
TSFM-207ENST00000540550 SMR3BP02814 79 aaPredicted RBP8.65□□□□□ -1.02
TSFM-207ENST00000540550 MP68P56378 58 aa8.65□□□□□ -1.02
TSFM-207ENST00000540550 TYMSOSQ8TAI1 123 aa8.63□□□□□ -1.03
TSFM-207ENST00000540550 PMAIP1Q13794 54 aa8.62□□□□□ -1.03
TSFM-207ENST00000540550 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
TSFM-207ENST00000540550 LIMD2Q9BT23 127 aa8.62□□□□□ -1.03
TSFM-207ENST00000540550 H0Y9P7 68 aa8.6□□□□□ -1.03
TSFM-207ENST00000540550 APOBP04114 4563 aaKnown RBP8.6□□□□□ -1.03
TSFM-207ENST00000540550 ZCCHC13Q8WW36 166 aaKnown RBP8.59□□□□□ -1.03
TSFM-207ENST00000540550 TP53AIP1Q9HCN2 124 aa8.58□□□□□ -1.04
TSFM-207ENST00000540550 NDUFS5O43920 106 aa8.58□□□□□ -1.04
TSFM-207ENST00000540550 MRPL34Q9BQ48 92 aaKnown RBP8.58□□□□□ -1.04
TSFM-207ENST00000540550 H3BPC8 53 aa8.57□□□□□ -1.04
TSFM-207ENST00000540550 LINC00208Q96KT6 92 aa8.57□□□□□ -1.04
TSFM-207ENST00000540550 C8orf87E5RJ46 101 aa8.56□□□□□ -1.04
TSFM-207ENST00000540550 NOTCH2NLQ7Z3S9 236 aa8.56□□□□□ -1.04
TSFM-207ENST00000540550 TRAV22A0A0B4J277 110 aa8.56□□□□□ -1.04
TSFM-207ENST00000540550 RYR3Q15413 4870 aa8.55□□□□□ -1.04
TSFM-207ENST00000540550 SPINK1P00995 79 aa8.54□□□□□ -1.04
TSFM-207ENST00000540550 PRR26Q8N8Z3 221 aa8.54□□□□□ -1.04
TSFM-207ENST00000540550 KRTAP10-4P60372 401 aaPredicted RBP8.52□□□□□ -1.05
TSFM-207ENST00000540550 LINC00304Q8N9R0 145 aa8.52□□□□□ -1.05
TSFM-207ENST00000540550 C1orf64Q8NEQ6 169 aa8.51□□□□□ -1.05
TSFM-207ENST00000540550 LINC00313P59037 77 aa8.5□□□□□ -1.05
TSFM-207ENST00000540550 SPAG11AQ6PDA7 123 aa8.49□□□□□ -1.05
TSFM-207ENST00000540550 FAT1Q14517 4588 aa8.48□□□□□ -1.05
TSFM-207ENST00000540550 Q1T7F1 81 aa8.48□□□□□ -1.05
TSFM-207ENST00000540550 RPS29P62273 56 aaKnown RBP8.47□□□□□ -1.05
TSFM-207ENST00000540550 MPLKIPQ8TAP9 179 aa8.46□□□□□ -1.06
TSFM-207ENST00000540550 FAM229AH3BQW9 127 aa8.45□□□□□ -1.06
TSFM-207ENST00000540550 PRR4Q16378 134 aa8.39□□□□□ -1.07
TSFM-207ENST00000540550 SPANXA2-OT1Q8N9U9 137 aa8.39□□□□□ -1.07
TSFM-207ENST00000540550 CYP4F30PQ9H0H9 118 aa8.39□□□□□ -1.07
TSFM-207ENST00000540550 Q8N9P0 234 aaPredicted RBP8.38□□□□□ -1.07
TSFM-207ENST00000540550 HSPG2P98160 4391 aa8.37□□□□□ -1.07
TSFM-207ENST00000540550 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
TSFM-207ENST00000540550 LOC101927531A0A1B0GV80 90 aa8.37□□□□□ -1.07
TSFM-207ENST00000540550 KRTAP16-1A8MUX0 517 aa8.37□□□□□ -1.07
TSFM-207ENST00000540550 PCOTHQ58A44 107 aa8.37□□□□□ -1.07
TSFM-207ENST00000540550 Q5W150 140 aa8.37□□□□□ -1.07
TSFM-207ENST00000540550 Q5VSD8 79 aa8.36□□□□□ -1.07
TSFM-207ENST00000540550 KRTAP13-3Q3SY46 172 aa8.35□□□□□ -1.07
TSFM-207ENST00000540550 KTN1-AS1Q86SY8 53 aa8.31□□□□□ -1.08
TSFM-207ENST00000540550 RYR1P21817 5038 aa8.31□□□□□ -1.08
TSFM-207ENST00000540550 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
TSFM-207ENST00000540550 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
TSFM-207ENST00000540550 EPPK1P58107 5090 aaKnown RBP8.23□□□□□ -1.09
TSFM-207ENST00000540550 IGKV2-30P06310 120 aa8.23□□□□□ -1.09
TSFM-207ENST00000540550 RBM12B-AS1Q9P1G2 102 aa8.23□□□□□ -1.09
TSFM-207ENST00000540550 KRTAP10-8P60410 259 aa8.21□□□□□ -1.09
TSFM-207ENST00000540550 C9orf92A6NGG3 77 aa8.21□□□□□ -1.1
TSFM-207ENST00000540550 Q8N1X5 172 aa8.21□□□□□ -1.1
TSFM-207ENST00000540550 KIAA1109Q2LD37 5005 aa8.2□□□□□ -1.1
TSFM-207ENST00000540550 ATP11AUNQ6ZP68 121 aa8.2□□□□□ -1.1
TSFM-207ENST00000540550 KRTAP17-1Q9BYP8 105 aa8.2□□□□□ -1.1
TSFM-207ENST00000540550 COA5Q86WW8 74 aa8.18□□□□□ -1.1
TSFM-207ENST00000540550 PSPHP1O15172 72 aa8.17□□□□□ -1.1
TSFM-207ENST00000540550 IGKV2D-30A0A075B6S6 120 aa8.17□□□□□ -1.1
TSFM-207ENST00000540550 HRES1P13985 223 aa8.16□□□□□ -1.1
TSFM-207ENST00000540550 FLG2Q5D862 2391 aaPredicted RBP8.16□□□□□ -1.1
TSFM-207ENST00000540550 TNXBP22105 4242 aa8.15□□□□□ -1.1
TSFM-207ENST00000540550 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.1
TSFM-207ENST00000540550 Q5VV11 94 aa8.14□□□□□ -1.11
TSFM-207ENST00000540550 A8MUU9 505 aa8.13□□□□□ -1.11
TSFM-207ENST00000540550 C20orf166-AS1Q96NR2 134 aa8.13□□□□□ -1.11
TSFM-207ENST00000540550 A8MUN3 132 aa8.13□□□□□ -1.11
TSFM-207ENST00000540550 FAT3Q8TDW7 4589 aa8.12□□□□□ -1.11
TSFM-207ENST00000540550 C7orf65Q6ZTY9 151 aa8.1□□□□□ -1.11
TSFM-207ENST00000540550 ACYP2P14621 99 aa8.09□□□□□ -1.11
TSFM-207ENST00000540550 A6NN06 94 aa8.08□□□□□ -1.12
TSFM-207ENST00000540550 CHKB-CPT1BH3BT56 60 aa8.08□□□□□ -1.12
TSFM-207ENST00000540550 Q75L30 129 aa8.08□□□□□ -1.12
TSFM-207ENST00000540550 DMAC1Q96GE9 116 aa8.07□□□□□ -1.12
TSFM-207ENST00000540550 LCA10Q71F78 164 aa8.05□□□□□ -1.12
TSFM-207ENST00000540550 MYCBP2O75592 4640 aa8.05□□□□□ -1.12
TSFM-207ENST00000540550 MT1HL1P0DM35 61 aa8.03□□□□□ -1.12
TSFM-207ENST00000540550 CDC42SE1Q9NRR8 79 aa8.03□□□□□ -1.12
TSFM-207ENST00000540550 SPTSSBQ8NFR3 76 aa8□□□□□ -1.13
TSFM-207ENST00000540550 PRR15LQ9BU68 103 aa7.99□□□□□ -1.13
TSFM-207ENST00000540550 A6NED7 52 aa7.97□□□□□ -1.13
TSFM-207ENST00000540550 DMBT1Q9UGM3 2413 aaPredicted RBP7.96□□□□□ -1.13
TSFM-207ENST00000540550 KRTAP4-5Q9BYR2 181 aa7.95□□□□□ -1.14
TSFM-207ENST00000540550 A8MU10 97 aa7.93□□□□□ -1.14
TSFM-207ENST00000540550 SPINK7P58062 85 aa7.93□□□□□ -1.14
TSFM-207ENST00000540550 RPL37P61927 97 aaKnown RBP7.91□□□□□ -1.14
TSFM-207ENST00000540550 LINC01558Q9Y6Z2 57 aa7.91□□□□□ -1.14
TSFM-207ENST00000540550 XP32Q5T750 250 aa7.9□□□□□ -1.14
TSFM-207ENST00000540550 BIRC6Q9NR09 4857 aa7.87□□□□□ -1.15
TSFM-207ENST00000540550 HERC2O95714 4834 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms