RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 FLG2Q5D862 2391 aaPredicted RBP5.37□□□□□ -1.55
DDB1-217ENST00000540166 MMP24-AS1A0A0U1RRL7 71 aa5.36□□□□□ -1.55
DDB1-217ENST00000540166 UQCR11O14957 56 aa5.36□□□□□ -1.55
DDB1-217ENST00000540166 MIR22HGQ0VDD5 57 aa5.36□□□□□ -1.55
DDB1-217ENST00000540166 Q5VSD8 79 aa5.36□□□□□ -1.55
DDB1-217ENST00000540166 KRTAP1-5Q9BYS1 174 aa5.36□□□□□ -1.55
DDB1-217ENST00000540166 DMBT1Q9UGM3 2413 aaPredicted RBP5.36□□□□□ -1.55
DDB1-217ENST00000540166 MRPL34Q9BQ48 92 aaKnown RBP5.35□□□□□ -1.55
DDB1-217ENST00000540166 ADM2Q7Z4H4 148 aa5.34□□□□□ -1.55
DDB1-217ENST00000540166 LINC00472Q9H8W2 130 aa5.34□□□□□ -1.55
DDB1-217ENST00000540166 CHTF8P0CG12 524 aa5.33□□□□□ -1.56
DDB1-217ENST00000540166 Q8N1X5 172 aa5.33□□□□□ -1.56
DDB1-217ENST00000540166 IGLV8-61A0A075B6I0 122 aa5.32□□□□□ -1.56
DDB1-217ENST00000540166 PRKDCP78527 4128 aaKnown RBP5.32□□□□□ -1.56
DDB1-217ENST00000540166 A0A1B0GVX0 72 aa5.31□□□□□ -1.56
DDB1-217ENST00000540166 KRTAP10-1P60331 282 aa5.31□□□□□ -1.56
DDB1-217ENST00000540166 CSAG1Q6PB30 78 aa5.31□□□□□ -1.56
DDB1-217ENST00000540166 ZNF706Q9Y5V0 76 aaPredicted RBP5.3□□□□□ -1.56
DDB1-217ENST00000540166 ASB16-AS1Q495Z4 193 aa5.28□□□□□ -1.56
DDB1-217ENST00000540166 KRTAP7-1Q8IUC3 87 aa5.27□□□□□ -1.57
DDB1-217ENST00000540166 A0A1B0GVY2 172 aa5.26□□□□□ -1.57
DDB1-217ENST00000540166 SPINK1P00995 79 aa5.26□□□□□ -1.57
DDB1-217ENST00000540166 PLAC8Q9NZF1 115 aa5.25□□□□□ -1.57
DDB1-217ENST00000540166 CIRBP-AS1Q8TBR5 109 aa5.24□□□□□ -1.57
DDB1-217ENST00000540166 K7ERS5 55 aa5.23□□□□□ -1.57
DDB1-217ENST00000540166 Q6ZRN7 208 aaPredicted RBP5.23□□□□□ -1.57
DDB1-217ENST00000540166 DNAH9Q9NYC9 4486 aa5.22□□□□□ -1.57
DDB1-217ENST00000540166 SPRR1BP22528 89 aa5.22□□□□□ -1.57
DDB1-217ENST00000540166 SPATA8Q6RVD6 105 aa5.22□□□□□ -1.57
DDB1-217ENST00000540166 IGKV2D-30A0A075B6S6 120 aa5.21□□□□□ -1.58
DDB1-217ENST00000540166 IGKV2-30P06310 120 aa5.21□□□□□ -1.58
DDB1-217ENST00000540166 SRRM2Q9UQ35 2752 aaKnown RBP5.21□□□□□ -1.58
DDB1-217ENST00000540166 CMYA5Q8N3K9 4069 aa5.19□□□□□ -1.58
DDB1-217ENST00000540166 ANAPC11Q9NYG5 84 aa5.16□□□□□ -1.58
DDB1-217ENST00000540166 HUWE1Q7Z6Z7 4374 aaKnown RBP5.16□□□□□ -1.58
DDB1-217ENST00000540166 KRTAP11-1Q8IUC1 163 aa5.16□□□□□ -1.58
DDB1-217ENST00000540166 DMAC1Q96GE9 116 aa5.15□□□□□ -1.58
DDB1-217ENST00000540166 A0A087X002 238 aa5.15□□□□□ -1.59
DDB1-217ENST00000540166 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.15□□□□□ -1.59
DDB1-217ENST00000540166 Q5W150 140 aa5.13□□□□□ -1.59
DDB1-217ENST00000540166 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
DDB1-217ENST00000540166 SSBP3-AS1Q7Z2R9 100 aa5.12□□□□□ -1.59
DDB1-217ENST00000540166 Q96NJ1 140 aa5.1□□□□□ -1.59
DDB1-217ENST00000540166 PANO1I0J062 215 aa5.1□□□□□ -1.59
DDB1-217ENST00000540166 SPINT4Q6UDR6 99 aa5.09□□□□□ -1.59
DDB1-217ENST00000540166 PSORS1C2Q9UIG4 136 aa5.09□□□□□ -1.59
DDB1-217ENST00000540166 SPACA4Q8TDM5 124 aa5.08□□□□□ -1.6
DDB1-217ENST00000540166 KMT2CQ8NEZ4 4911 aaKnown RBP5.07□□□□□ -1.6
DDB1-217ENST00000540166 IGLV7-43P04211 117 aa5.07□□□□□ -1.6
DDB1-217ENST00000540166 DNAH3Q8TD57 4116 aa5.07□□□□□ -1.6
DDB1-217ENST00000540166 ZNF861PO60384 105 aa5.07□□□□□ -1.6
DDB1-217ENST00000540166 ROMO1P60602 79 aa5.06□□□□□ -1.6
DDB1-217ENST00000540166 KRTAP4-5Q9BYR2 181 aa5.06□□□□□ -1.6
DDB1-217ENST00000540166 BIRC6Q9NR09 4857 aa5.06□□□□□ -1.6
DDB1-217ENST00000540166 KRTAP25-1Q3LHN0 102 aa5.05□□□□□ -1.6
DDB1-217ENST00000540166 TYMSOSQ8TAI1 123 aa5.04□□□□□ -1.6
DDB1-217ENST00000540166 CRIPTQ9P021 101 aa5.04□□□□□ -1.6
DDB1-217ENST00000540166 Q6ZSA8 131 aa5.03□□□□□ -1.6
DDB1-217ENST00000540166 ALMS1Q8TCU4 4167 aa5.01□□□□□ -1.61
DDB1-217ENST00000540166 A0A1B0GU33 70 aa5□□□□□ -1.61
DDB1-217ENST00000540166 PLECQ15149 4684 aaKnown RBP5□□□□□ -1.61
DDB1-217ENST00000540166 KRTAP13-1Q8IUC0 172 aa5□□□□□ -1.61
DDB1-217ENST00000540166 LINC00483Q53H64 154 aa4.99□□□□□ -1.61
DDB1-217ENST00000540166 KRTAP17-1Q9BYP8 105 aa4.99□□□□□ -1.61
DDB1-217ENST00000540166 RYR2Q92736 4967 aa4.99□□□□□ -1.61
DDB1-217ENST00000540166 STARD9Q9P2P6 4700 aa4.99□□□□□ -1.61
DDB1-217ENST00000540166 RYR3Q15413 4870 aa4.95□□□□□ -1.62
DDB1-217ENST00000540166 DYNC2H1Q8NCM8 4307 aaKnown RBP4.94□□□□□ -1.62
DDB1-217ENST00000540166 CSMD3Q7Z407 3707 aa4.94□□□□□ -1.62
DDB1-217ENST00000540166 LINC00304Q8N9R0 145 aa4.94□□□□□ -1.62
DDB1-217ENST00000540166 A8MUU9 505 aa4.93□□□□□ -1.62
DDB1-217ENST00000540166 KIAA1109Q2LD37 5005 aa4.93□□□□□ -1.62
DDB1-217ENST00000540166 SACSQ9NZJ4 4579 aa4.93□□□□□ -1.62
DDB1-217ENST00000540166 KRTAP13-3Q3SY46 172 aa4.92□□□□□ -1.62
DDB1-217ENST00000540166 H1FX-AS1Q4G0G2 97 aa4.88□□□□□ -1.63
DDB1-217ENST00000540166 EPPK1P58107 5090 aaKnown RBP4.88□□□□□ -1.63
DDB1-217ENST00000540166 H0YAA0 97 aa4.86□□□□□ -1.63
DDB1-217ENST00000540166 NDUFAF8A1L188 74 aa4.85□□□□□ -1.63
DDB1-217ENST00000540166 HYDINQ4G0P3 5121 aa4.85□□□□□ -1.63
DDB1-217ENST00000540166 DNAH1Q9P2D7 4330 aa4.85□□□□□ -1.63
DDB1-217ENST00000540166 A0A0D9SG42 100 aa4.85□□□□□ -1.63
DDB1-217ENST00000540166 DNAH11Q96DT5 4516 aa4.84□□□□□ -1.63
DDB1-217ENST00000540166 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
DDB1-217ENST00000540166 DNAH7Q8WXX0 4024 aa4.82□□□□□ -1.64
DDB1-217ENST00000540166 DNAH10Q8IVF4 4471 aa4.81□□□□□ -1.64
DDB1-217ENST00000540166 VPS13DQ5THJ4 4388 aa4.8□□□□□ -1.64
DDB1-217ENST00000540166 RPL37P61927 97 aaKnown RBP4.79□□□□□ -1.64
DDB1-217ENST00000540166 KMT2AQ03164 3969 aa4.78□□□□□ -1.64
DDB1-217ENST00000540166 DNAH5Q8TE73 4624 aa4.78□□□□□ -1.64
DDB1-217ENST00000540166 KRTAP13-2Q52LG2 175 aa4.78□□□□□ -1.65
DDB1-217ENST00000540166 C9orf92A6NGG3 77 aa4.77□□□□□ -1.65
DDB1-217ENST00000540166 P0C880 135 aa4.77□□□□□ -1.65
DDB1-217ENST00000540166 C20orf166-AS1Q96NR2 134 aa4.77□□□□□ -1.65
DDB1-217ENST00000540166 HERC2O95714 4834 aa4.76□□□□□ -1.65
DDB1-217ENST00000540166 DYNC1H1Q14204 4646 aaKnown RBP4.76□□□□□ -1.65
DDB1-217ENST00000540166 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
DDB1-217ENST00000540166 COX6B2Q6YFQ2 88 aa4.75□□□□□ -1.65
DDB1-217ENST00000540166 KRTAP10-8P60410 259 aa4.74□□□□□ -1.65
DDB1-217ENST00000540166 RYR1P21817 5038 aa4.74□□□□□ -1.65
DDB1-217ENST00000540166 SEC61BP60468 96 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms