RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 J3KT08 172 aa9.75□□□□□ -0.85
CLN6-202ENST00000538696 HMCN2Q8NDA2 5059 aa9.74□□□□□ -0.85
CLN6-202ENST00000538696 A8MWP4 228 aa9.73□□□□□ -0.85
CLN6-202ENST00000538696 SCGB1A1P11684 91 aa9.73□□□□□ -0.85
CLN6-202ENST00000538696 FAM236AA0A1B0GUQ0 79 aa9.72□□□□□ -0.85
CLN6-202ENST00000538696 FAM236BA0A1B0GV22 79 aa9.72□□□□□ -0.85
CLN6-202ENST00000538696 C1orf195Q5TG92 126 aa9.72□□□□□ -0.85
CLN6-202ENST00000538696 PRR15Q8IV56 129 aa9.69□□□□□ -0.86
CLN6-202ENST00000538696 PRR4Q16378 134 aa9.67□□□□□ -0.86
CLN6-202ENST00000538696 NDUFB1O75438 58 aa9.65□□□□□ -0.86
CLN6-202ENST00000538696 A0A1B0GVX0 72 aa9.64□□□□□ -0.87
CLN6-202ENST00000538696 FP248Q71RG6 208 aaPredicted RBP9.64□□□□□ -0.87
CLN6-202ENST00000538696 IGHV6-1A0A0B4J1U7 121 aa9.62□□□□□ -0.87
CLN6-202ENST00000538696 IGLV7-46A0A075B6I9 117 aa9.61□□□□□ -0.87
CLN6-202ENST00000538696 HCG22E2RYF7 251 aa9.61□□□□□ -0.87
CLN6-202ENST00000538696 MMP24-AS1A0A0U1RRL7 71 aa9.6□□□□□ -0.87
CLN6-202ENST00000538696 WFDC13Q8IUB5 93 aa9.6□□□□□ -0.87
CLN6-202ENST00000538696 C8orf17Q9NRJ1 99 aa9.59□□□□□ -0.87
CLN6-202ENST00000538696 NOTCH2NLQ7Z3S9 236 aa9.58□□□□□ -0.88
CLN6-202ENST00000538696 ATOX1O00244 68 aa9.56□□□□□ -0.88
CLN6-202ENST00000538696 CASC2Q6XLA1 102 aa9.56□□□□□ -0.88
CLN6-202ENST00000538696 LPAP08519 4548 aa9.55□□□□□ -0.88
CLN6-202ENST00000538696 ANAPC13Q9BS18 74 aa9.54□□□□□ -0.88
CLN6-202ENST00000538696 C8orf87E5RJ46 101 aa9.53□□□□□ -0.88
CLN6-202ENST00000538696 TPRXLQ17RH7 258 aa9.53□□□□□ -0.88
CLN6-202ENST00000538696 KRTAP13-3Q3SY46 172 aa9.53□□□□□ -0.88
CLN6-202ENST00000538696 hDV103S1A0JD37 113 aa9.52□□□□□ -0.89
CLN6-202ENST00000538696 PCP4P48539 62 aa9.5□□□□□ -0.89
CLN6-202ENST00000538696 LRP2P98164 4655 aa9.49□□□□□ -0.89
CLN6-202ENST00000538696 TMEM254Q8TBM7 123 aa9.49□□□□□ -0.89
CLN6-202ENST00000538696 LINC00313P59037 77 aa9.47□□□□□ -0.89
CLN6-202ENST00000538696 OCR1Q9BZK8 76 aa9.46□□□□□ -0.9
CLN6-202ENST00000538696 TRAV7A0A075B6U4 112 aa9.45□□□□□ -0.9
CLN6-202ENST00000538696 C9orf92A6NGG3 77 aa9.45□□□□□ -0.9
CLN6-202ENST00000538696 SERP2Q8N6R1 65 aa9.45□□□□□ -0.9
CLN6-202ENST00000538696 MRPL34Q9BQ48 92 aaKnown RBP9.45□□□□□ -0.9
CLN6-202ENST00000538696 KRTAP16-1A8MUX0 517 aa9.44□□□□□ -0.9
CLN6-202ENST00000538696 SMIM20Q8N5G0 67 aa9.44□□□□□ -0.9
CLN6-202ENST00000538696 COX7CP15954 63 aa9.4□□□□□ -0.9
CLN6-202ENST00000538696 XP32Q5T750 250 aa9.39□□□□□ -0.91
CLN6-202ENST00000538696 NDUFS5O43920 106 aa9.38□□□□□ -0.91
CLN6-202ENST00000538696 CCDC179H3BU77 68 aa9.37□□□□□ -0.91
CLN6-202ENST00000538696 UQCRQO14949 82 aa9.35□□□□□ -0.91
CLN6-202ENST00000538696 Q8N9P0 234 aaPredicted RBP9.35□□□□□ -0.91
CLN6-202ENST00000538696 MUC17Q685J3 4493 aa9.33□□□□□ -0.92
CLN6-202ENST00000538696 UBR4Q5T4S7 5183 aa9.32□□□□□ -0.92
CLN6-202ENST00000538696 TP53AIP1Q9HCN2 124 aa9.31□□□□□ -0.92
CLN6-202ENST00000538696 C20orf197Q8N268 126 aa9.28□□□□□ -0.92
CLN6-202ENST00000538696 H0Y9P7 68 aa9.27□□□□□ -0.93
CLN6-202ENST00000538696 A8MUU9 505 aa9.26□□□□□ -0.93
CLN6-202ENST00000538696 C5orf47Q569G3 176 aa9.26□□□□□ -0.93
CLN6-202ENST00000538696 Q5W150 140 aa9.26□□□□□ -0.93
CLN6-202ENST00000538696 C20orf166-AS1Q96NR2 134 aa9.26□□□□□ -0.93
CLN6-202ENST00000538696 TRAV22A0A0B4J277 110 aa9.25□□□□□ -0.93
CLN6-202ENST00000538696 A0A0U1RQV1 116 aa9.25□□□□□ -0.93
CLN6-202ENST00000538696 RPL37P61927 97 aaKnown RBP9.25□□□□□ -0.93
CLN6-202ENST00000538696 SNURFQ9Y675 71 aa9.25□□□□□ -0.93
CLN6-202ENST00000538696 CYSTM1Q9H1C7 97 aa9.23□□□□□ -0.93
CLN6-202ENST00000538696 MP68P56378 58 aa9.22□□□□□ -0.93
CLN6-202ENST00000538696 Q75L30 129 aa9.22□□□□□ -0.93
CLN6-202ENST00000538696 RNF213Q63HN8 5207 aa9.2□□□□□ -0.94
CLN6-202ENST00000538696 SEC61BP60468 96 aaKnown RBP9.19□□□□□ -0.94
CLN6-202ENST00000538696 KLKP1Q107X0 134 aa9.19□□□□□ -0.94
CLN6-202ENST00000538696 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
CLN6-202ENST00000538696 LINC00208Q96KT6 92 aa9.19□□□□□ -0.94
CLN6-202ENST00000538696 H3BPC8 53 aa9.16□□□□□ -0.94
CLN6-202ENST00000538696 PCOTHQ58A44 107 aa9.16□□□□□ -0.94
CLN6-202ENST00000538696 C1orf64Q8NEQ6 169 aa9.15□□□□□ -0.94
CLN6-202ENST00000538696 ATP11AUNQ6ZP68 121 aa9.1□□□□□ -0.95
CLN6-202ENST00000538696 LOC101927531A0A1B0GV80 90 aa9.08□□□□□ -0.96
CLN6-202ENST00000538696 H7BZZ5 65 aa9.08□□□□□ -0.96
CLN6-202ENST00000538696 KRTAP4-1Q9BYQ7 146 aa9.08□□□□□ -0.96
CLN6-202ENST00000538696 IGKV2-30P06310 120 aa9.07□□□□□ -0.96
CLN6-202ENST00000538696 NDUFC1O43677 76 aa9.05□□□□□ -0.96
CLN6-202ENST00000538696 CYP4F30PQ9H0H9 118 aa9.05□□□□□ -0.96
CLN6-202ENST00000538696 IGKV2D-30A0A075B6S6 120 aa9.04□□□□□ -0.96
CLN6-202ENST00000538696 TMEM258P61165 79 aa8.98□□□□□ -0.97
CLN6-202ENST00000538696 C7orf65Q6ZTY9 151 aa8.98□□□□□ -0.97
CLN6-202ENST00000538696 MUC2Q02817 5179 aa8.97□□□□□ -0.97
CLN6-202ENST00000538696 FAM236DA0A1B0GTK5 79 aa8.93□□□□□ -0.98
CLN6-202ENST00000538696 FAM236CP0DP71 79 aa8.93□□□□□ -0.98
CLN6-202ENST00000538696 SPINK7P58062 85 aa8.93□□□□□ -0.98
CLN6-202ENST00000538696 HRES1P13985 223 aa8.91□□□□□ -0.98
CLN6-202ENST00000538696 SPANXA2-OT1Q8N9U9 137 aa8.89□□□□□ -0.99
CLN6-202ENST00000538696 ATP5EP56381 51 aaPredicted RBP8.85□□□□□ -0.99
CLN6-202ENST00000538696 FAT4Q6V0I7 4981 aa8.84□□□□□ -0.99
CLN6-202ENST00000538696 KRTAP19-2Q3LHN2 52 aa8.8□□□□□ -1
CLN6-202ENST00000538696 C4orf26Q17RF5 130 aa8.8□□□□□ -1
CLN6-202ENST00000538696 DMAC1Q96GE9 116 aa8.76□□□□□ -1.01
CLN6-202ENST00000538696 MPLKIPQ8TAP9 179 aa8.75□□□□□ -1.01
CLN6-202ENST00000538696 LCE2CQ5TA81 110 aa8.74□□□□□ -1.01
CLN6-202ENST00000538696 SERP1Q9Y6X1 66 aa8.71□□□□□ -1.02
CLN6-202ENST00000538696 COX6B2Q6YFQ2 88 aa8.7□□□□□ -1.02
CLN6-202ENST00000538696 KRTAP3-1Q9BYR8 98 aa8.7□□□□□ -1.02
CLN6-202ENST00000538696 RBM12B-AS1Q9P1G2 102 aa8.68□□□□□ -1.02
CLN6-202ENST00000538696 COA5Q86WW8 74 aa8.67□□□□□ -1.02
CLN6-202ENST00000538696 A8MUN3 132 aa8.65□□□□□ -1.02
CLN6-202ENST00000538696 ACYP2P14621 99 aa8.65□□□□□ -1.02
CLN6-202ENST00000538696 RPS28P62857 69 aaKnown RBP8.61□□□□□ -1.03
CLN6-202ENST00000538696 MT1HP80294 61 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms