RNA–Protein interactions for RNA: ENST00000538261.7

CLDN7-203, Transcript of claudin 7, humanhuman

TSL 5 BASIC

Gene CLDN7, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-203ENST00000538261 CASC2Q6XLA1 102 aa10.46□□□□□ -0.73
CLDN7-203ENST00000538261 ZNF706Q9Y5V0 76 aaPredicted RBP10.46□□□□□ -0.74
CLDN7-203ENST00000538261 H0Y9P7 68 aa10.45□□□□□ -0.74
CLDN7-203ENST00000538261 PRR4Q16378 134 aa10.45□□□□□ -0.74
CLDN7-203ENST00000538261 A8MWP4 228 aa10.45□□□□□ -0.74
CLDN7-203ENST00000538261 RPL37AP61513 92 aaKnown RBP10.43□□□□□ -0.74
CLDN7-203ENST00000538261 LINC00472Q9H8W2 130 aa10.43□□□□□ -0.74
CLDN7-203ENST00000538261 PSPHP1O15172 72 aa10.42□□□□□ -0.74
CLDN7-203ENST00000538261 LIMD2Q9BT23 127 aa10.39□□□□□ -0.75
CLDN7-203ENST00000538261 ANAPC11Q9NYG5 84 aa10.38□□□□□ -0.75
CLDN7-203ENST00000538261 A8MUN3 132 aa10.36□□□□□ -0.75
CLDN7-203ENST00000538261 SMR3BP02814 79 aaPredicted RBP10.35□□□□□ -0.75
CLDN7-203ENST00000538261 IGLV9-49A0A0B4J1Y8 123 aa10.35□□□□□ -0.75
CLDN7-203ENST00000538261 Q8N9P0 234 aaPredicted RBP10.34□□□□□ -0.75
CLDN7-203ENST00000538261 FAT1Q14517 4588 aa10.33□□□□□ -0.76
CLDN7-203ENST00000538261 Q5VV11 94 aa10.33□□□□□ -0.76
CLDN7-203ENST00000538261 PMAIP1Q13794 54 aa10.33□□□□□ -0.76
CLDN7-203ENST00000538261 MMP24-AS1A0A0U1RRL7 71 aa10.32□□□□□ -0.76
CLDN7-203ENST00000538261 KRTAP10-4P60372 401 aaPredicted RBP10.31□□□□□ -0.76
CLDN7-203ENST00000538261 IGLV7-46A0A075B6I9 117 aa10.3□□□□□ -0.76
CLDN7-203ENST00000538261 MOBPQ13875 183 aa10.3□□□□□ -0.76
CLDN7-203ENST00000538261 TP53AIP1Q9HCN2 124 aa10.29□□□□□ -0.76
CLDN7-203ENST00000538261 KRTAP1-4P0C5Y4 121 aa10.29□□□□□ -0.76
CLDN7-203ENST00000538261 ASB16-AS1Q495Z4 193 aa10.27□□□□□ -0.77
CLDN7-203ENST00000538261 SEC61GP60059 68 aa10.26□□□□□ -0.77
CLDN7-203ENST00000538261 SPINK6Q6UWN8 80 aa10.26□□□□□ -0.77
CLDN7-203ENST00000538261 HSPG2P98160 4391 aa10.26□□□□□ -0.77
CLDN7-203ENST00000538261 A0A087X002 238 aa10.25□□□□□ -0.77
CLDN7-203ENST00000538261 CDK2AP2O75956 126 aa10.24□□□□□ -0.77
CLDN7-203ENST00000538261 LOC101927531A0A1B0GV80 90 aa10.23□□□□□ -0.77
CLDN7-203ENST00000538261 CHKB-CPT1BH3BT56 60 aa10.23□□□□□ -0.77
CLDN7-203ENST00000538261 COA5Q86WW8 74 aa10.23□□□□□ -0.77
CLDN7-203ENST00000538261 Q75L30 129 aa10.23□□□□□ -0.77
CLDN7-203ENST00000538261 PRR15LQ9BU68 103 aa10.23□□□□□ -0.77
CLDN7-203ENST00000538261 EPPK1P58107 5090 aaKnown RBP10.22□□□□□ -0.77
CLDN7-203ENST00000538261 KRTAP13-2Q52LG2 175 aa10.22□□□□□ -0.77
CLDN7-203ENST00000538261 RYR1P21817 5038 aa10.22□□□□□ -0.77
CLDN7-203ENST00000538261 Q96NJ1 140 aa10.21□□□□□ -0.78
CLDN7-203ENST00000538261 SSBP3-AS1Q7Z2R9 100 aa10.18□□□□□ -0.78
CLDN7-203ENST00000538261 C8orf17Q9NRJ1 99 aa10.17□□□□□ -0.78
CLDN7-203ENST00000538261 PLA2G1BP04054 148 aaKnown RBP10.16□□□□□ -0.78
CLDN7-203ENST00000538261 PKHD1L1Q86WI1 4243 aa10.14□□□□□ -0.79
CLDN7-203ENST00000538261 CD164Q04900 197 aa10.14□□□□□ -0.79
CLDN7-203ENST00000538261 ATP11AUNQ6ZP68 121 aa10.13□□□□□ -0.79
CLDN7-203ENST00000538261 LINC01558Q9Y6Z2 57 aa10.13□□□□□ -0.79
CLDN7-203ENST00000538261 KIAA1109Q2LD37 5005 aa10.13□□□□□ -0.79
CLDN7-203ENST00000538261 A0A1B0GVX0 72 aa10.12□□□□□ -0.79
CLDN7-203ENST00000538261 FAM229AH3BQW9 127 aa10.12□□□□□ -0.79
CLDN7-203ENST00000538261 PCOTHQ58A44 107 aa10.12□□□□□ -0.79
CLDN7-203ENST00000538261 Q5VSD8 79 aa10.11□□□□□ -0.79
CLDN7-203ENST00000538261 KRTAP17-1Q9BYP8 105 aa10.11□□□□□ -0.79
CLDN7-203ENST00000538261 A8MU10 97 aa10.1□□□□□ -0.79
CLDN7-203ENST00000538261 A6NED7 52 aa10.09□□□□□ -0.79
CLDN7-203ENST00000538261 LCA10Q71F78 164 aa10.08□□□□□ -0.8
CLDN7-203ENST00000538261 MRPL34Q9BQ48 92 aaKnown RBP10.08□□□□□ -0.8
CLDN7-203ENST00000538261 PRR26Q8N8Z3 221 aa10.07□□□□□ -0.8
CLDN7-203ENST00000538261 CDC42SE1Q9NRR8 79 aa10.07□□□□□ -0.8
CLDN7-203ENST00000538261 TYMSOSQ8TAI1 123 aa10.06□□□□□ -0.8
CLDN7-203ENST00000538261 IGHV6-1A0A0B4J1U7 121 aa10.05□□□□□ -0.8
CLDN7-203ENST00000538261 NDUFS5O43920 106 aa10.05□□□□□ -0.8
CLDN7-203ENST00000538261 KTN1-AS1Q86SY8 53 aa10.05□□□□□ -0.8
CLDN7-203ENST00000538261 HRES1P13985 223 aa10.01□□□□□ -0.81
CLDN7-203ENST00000538261 SPTSSBQ8NFR3 76 aa10.01□□□□□ -0.81
CLDN7-203ENST00000538261 SPAG11AQ6PDA7 123 aa10.01□□□□□ -0.81
CLDN7-203ENST00000538261 Q8N1X5 172 aa9.99□□□□□ -0.81
CLDN7-203ENST00000538261 A6NN06 94 aa9.98□□□□□ -0.81
CLDN7-203ENST00000538261 LINC00304Q8N9R0 145 aa9.95□□□□□ -0.82
CLDN7-203ENST00000538261 SPINK1P00995 79 aa9.95□□□□□ -0.82
CLDN7-203ENST00000538261 C4orf48Q5BLP8 95 aa9.94□□□□□ -0.82
CLDN7-203ENST00000538261 LRP1Q07954 4544 aaKnown RBP9.93□□□□□ -0.82
CLDN7-203ENST00000538261 KRTAP13-3Q3SY46 172 aa9.92□□□□□ -0.82
CLDN7-203ENST00000538261 RPS29P62273 56 aaKnown RBP9.91□□□□□ -0.82
CLDN7-203ENST00000538261 NOTCH2NLQ7Z3S9 236 aa9.91□□□□□ -0.82
CLDN7-203ENST00000538261 TNXBP22105 4242 aa9.9□□□□□ -0.82
CLDN7-203ENST00000538261 FAT3Q8TDW7 4589 aa9.88□□□□□ -0.83
CLDN7-203ENST00000538261 C8orf87E5RJ46 101 aa9.88□□□□□ -0.83
CLDN7-203ENST00000538261 ACYP2P14621 99 aa9.88□□□□□ -0.83
CLDN7-203ENST00000538261 SPINK7P58062 85 aa9.87□□□□□ -0.83
CLDN7-203ENST00000538261 KRTAP10-8P60410 259 aa9.86□□□□□ -0.83
CLDN7-203ENST00000538261 Q5W150 140 aa9.86□□□□□ -0.83
CLDN7-203ENST00000538261 C7orf65Q6ZTY9 151 aa9.85□□□□□ -0.83
CLDN7-203ENST00000538261 BIRC6Q9NR09 4857 aa9.83□□□□□ -0.84
CLDN7-203ENST00000538261 RBM12B-AS1Q9P1G2 102 aa9.83□□□□□ -0.84
CLDN7-203ENST00000538261 FLG2Q5D862 2391 aaPredicted RBP9.82□□□□□ -0.84
CLDN7-203ENST00000538261 MYCBP2O75592 4640 aa9.8□□□□□ -0.84
CLDN7-203ENST00000538261 KRTAP4-5Q9BYR2 181 aa9.8□□□□□ -0.84
CLDN7-203ENST00000538261 DMAC1Q96GE9 116 aa9.79□□□□□ -0.84
CLDN7-203ENST00000538261 MT1HL1P0DM35 61 aa9.76□□□□□ -0.85
CLDN7-203ENST00000538261 HERC2O95714 4834 aa9.72□□□□□ -0.85
CLDN7-203ENST00000538261 LINC00313P59037 77 aa9.72□□□□□ -0.85
CLDN7-203ENST00000538261 IGKV2-30P06310 120 aa9.68□□□□□ -0.86
CLDN7-203ENST00000538261 RETNLBQ9BQ08 111 aa9.68□□□□□ -0.86
CLDN7-203ENST00000538261 ABCA13Q86UQ4 5058 aa9.67□□□□□ -0.86
CLDN7-203ENST00000538261 A0A1B0GU69 56 aa9.65□□□□□ -0.86
CLDN7-203ENST00000538261 KRTAP16-1A8MUX0 517 aa9.64□□□□□ -0.87
CLDN7-203ENST00000538261 SPATA8Q6RVD6 105 aa9.63□□□□□ -0.87
CLDN7-203ENST00000538261 DMBT1Q9UGM3 2413 aaPredicted RBP9.62□□□□□ -0.87
CLDN7-203ENST00000538261 UQCR11O14957 56 aa9.54□□□□□ -0.88
CLDN7-203ENST00000538261 C9orf92A6NGG3 77 aa9.52□□□□□ -0.89
CLDN7-203ENST00000538261 MIR22HGQ0VDD5 57 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms