RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 VPREB1P12018 145 aa5.13□□□□□ -1.59
SFSWAP-202ENST00000535202 C1orf64Q8NEQ6 169 aa5.13□□□□□ -1.59
SFSWAP-202ENST00000535202 ZNF861PO60384 105 aa5.12□□□□□ -1.59
SFSWAP-202ENST00000535202 RPL37AP8A6NKH3 93 aa5.11□□□□□ -1.59
SFSWAP-202ENST00000535202 RBM12B-AS1Q9P1G2 102 aa5.11□□□□□ -1.59
SFSWAP-202ENST00000535202 NKAPP1Q8N9T2 125 aa5.1□□□□□ -1.59
SFSWAP-202ENST00000535202 HIGD2AQ9BW72 106 aa5.1□□□□□ -1.59
SFSWAP-202ENST00000535202 IGLV5-37A0A075B6J1 123 aa5.09□□□□□ -1.59
SFSWAP-202ENST00000535202 M0R378 163 aa5.09□□□□□ -1.59
SFSWAP-202ENST00000535202 Q6ZQY7 126 aa5.09□□□□□ -1.59
SFSWAP-202ENST00000535202 SPANXA2-OT1Q8N9U9 137 aa5.09□□□□□ -1.59
SFSWAP-202ENST00000535202 Q9BRP9 147 aa5.09□□□□□ -1.59
SFSWAP-202ENST00000535202 LPAP08519 4548 aa5.09□□□□□ -1.6
SFSWAP-202ENST00000535202 ETDCA0A1B0GVM5 59 aa5.08□□□□□ -1.6
SFSWAP-202ENST00000535202 H3BPC8 53 aa5.08□□□□□ -1.6
SFSWAP-202ENST00000535202 RNF213Q63HN8 5207 aa5.07□□□□□ -1.6
SFSWAP-202ENST00000535202 Q5VV11 94 aa5.07□□□□□ -1.6
SFSWAP-202ENST00000535202 Q75L30 129 aa5.07□□□□□ -1.6
SFSWAP-202ENST00000535202 A0A087X002 238 aa5.05□□□□□ -1.6
SFSWAP-202ENST00000535202 LOC101927531A0A1B0GV80 90 aa5.05□□□□□ -1.6
SFSWAP-202ENST00000535202 A6NN06 94 aa5.05□□□□□ -1.6
SFSWAP-202ENST00000535202 PRR4Q16378 134 aa5.05□□□□□ -1.6
SFSWAP-202ENST00000535202 C4orf48Q5BLP8 95 aa5.05□□□□□ -1.6
SFSWAP-202ENST00000535202 C7orf65Q6ZTY9 151 aa5.05□□□□□ -1.6
SFSWAP-202ENST00000535202 TYMSOSQ8TAI1 123 aa5.05□□□□□ -1.6
SFSWAP-202ENST00000535202 A8MUN3 132 aa5.04□□□□□ -1.6
SFSWAP-202ENST00000535202 PSPHP1O15172 72 aa5.04□□□□□ -1.6
SFSWAP-202ENST00000535202 PRLHP81277 87 aa5.04□□□□□ -1.6
SFSWAP-202ENST00000535202 KRTAP13-1Q8IUC0 172 aa5.04□□□□□ -1.6
SFSWAP-202ENST00000535202 ANAPC11Q9NYG5 84 aa5.04□□□□□ -1.6
SFSWAP-202ENST00000535202 ZNF73O43830 326 aaPredicted RBP5.03□□□□□ -1.6
SFSWAP-202ENST00000535202 LCA10Q71F78 164 aa5.03□□□□□ -1.6
SFSWAP-202ENST00000535202 Q8NDZ9 215 aa5.03□□□□□ -1.6
SFSWAP-202ENST00000535202 KCNQ1DNQ9H478 68 aa5.03□□□□□ -1.6
SFSWAP-202ENST00000535202 IGLV5-48A0A075B6I7 105 aa5.02□□□□□ -1.61
SFSWAP-202ENST00000535202 Q8N9P0 234 aaPredicted RBP5.02□□□□□ -1.61
SFSWAP-202ENST00000535202 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
SFSWAP-202ENST00000535202 HCG22E2RYF7 251 aa5.01□□□□□ -1.61
SFSWAP-202ENST00000535202 CHKB-CPT1BH3BT56 60 aa5.01□□□□□ -1.61
SFSWAP-202ENST00000535202 MP68P56378 58 aa5.01□□□□□ -1.61
SFSWAP-202ENST00000535202 ASB16-AS1Q495Z4 193 aa5.01□□□□□ -1.61
SFSWAP-202ENST00000535202 KRTAP13-2Q52LG2 175 aa5.01□□□□□ -1.61
SFSWAP-202ENST00000535202 SMIM29Q86T20 159 aa5.01□□□□□ -1.61
SFSWAP-202ENST00000535202 LINC00208Q96KT6 92 aa4.99□□□□□ -1.61
SFSWAP-202ENST00000535202 Q8N9L7 120 aa4.98□□□□□ -1.61
SFSWAP-202ENST00000535202 LINC00304Q8N9R0 145 aa4.98□□□□□ -1.61
SFSWAP-202ENST00000535202 SPRR4Q96PI1 79 aa4.98□□□□□ -1.61
SFSWAP-202ENST00000535202 RETNLBQ9BQ08 111 aa4.97□□□□□ -1.61
SFSWAP-202ENST00000535202 C8orf87E5RJ46 101 aa4.95□□□□□ -1.62
SFSWAP-202ENST00000535202 Q8NBF4 154 aa4.95□□□□□ -1.62
SFSWAP-202ENST00000535202 PRR15LQ9BU68 103 aa4.95□□□□□ -1.62
SFSWAP-202ENST00000535202 A6NED7 52 aa4.94□□□□□ -1.62
SFSWAP-202ENST00000535202 DHRS4-AS1Q9P1J3 65 aa4.94□□□□□ -1.62
SFSWAP-202ENST00000535202 ZNF706Q9Y5V0 76 aaPredicted RBP4.94□□□□□ -1.62
SFSWAP-202ENST00000535202 LINC01558Q9Y6Z2 57 aa4.94□□□□□ -1.62
SFSWAP-202ENST00000535202 SPRR1AP35321 89 aa4.93□□□□□ -1.62
SFSWAP-202ENST00000535202 DSCR10P59022 87 aa4.93□□□□□ -1.62
SFSWAP-202ENST00000535202 SPTSSBQ8NFR3 76 aa4.93□□□□□ -1.62
SFSWAP-202ENST00000535202 IGLV7-46A0A075B6I9 117 aa4.91□□□□□ -1.62
SFSWAP-202ENST00000535202 A0A1W2PNM2 257 aa4.91□□□□□ -1.62
SFSWAP-202ENST00000535202 KRTAP4-16G5E9R7 235 aaPredicted RBP4.91□□□□□ -1.62
SFSWAP-202ENST00000535202 ST20-AS1Q8NBB2 130 aa4.91□□□□□ -1.62
SFSWAP-202ENST00000535202 MUC17Q685J3 4493 aa4.9□□□□□ -1.62
SFSWAP-202ENST00000535202 SPAG11AQ6PDA7 123 aa4.9□□□□□ -1.63
SFSWAP-202ENST00000535202 Q8N377 158 aa4.9□□□□□ -1.63
SFSWAP-202ENST00000535202 MOBPQ13875 183 aa4.89□□□□□ -1.63
SFSWAP-202ENST00000535202 TPRXLQ17RH7 258 aa4.89□□□□□ -1.63
SFSWAP-202ENST00000535202 A8MU10 97 aa4.88□□□□□ -1.63
SFSWAP-202ENST00000535202 LINC00483Q53H64 154 aa4.88□□□□□ -1.63
SFSWAP-202ENST00000535202 CASC2Q6XLA1 102 aa4.88□□□□□ -1.63
SFSWAP-202ENST00000535202 IGLV9-49A0A0B4J1Y8 123 aa4.87□□□□□ -1.63
SFSWAP-202ENST00000535202 K7EQZ3 153 aa4.87□□□□□ -1.63
SFSWAP-202ENST00000535202 Q6ZRX8 168 aa4.87□□□□□ -1.63
SFSWAP-202ENST00000535202 COA5Q86WW8 74 aa4.87□□□□□ -1.63
SFSWAP-202ENST00000535202 MUC2Q02817 5179 aa4.87□□□□□ -1.63
SFSWAP-202ENST00000535202 H0Y9P7 68 aa4.86□□□□□ -1.63
SFSWAP-202ENST00000535202 SPINK1P00995 79 aa4.85□□□□□ -1.63
SFSWAP-202ENST00000535202 IGLV8-61A0A075B6I0 122 aa4.84□□□□□ -1.63
SFSWAP-202ENST00000535202 LINC01554Q52M75 96 aa4.83□□□□□ -1.64
SFSWAP-202ENST00000535202 SSBP3-AS1Q7Z2R9 100 aa4.83□□□□□ -1.64
SFSWAP-202ENST00000535202 H3BS24 57 aa4.82□□□□□ -1.64
SFSWAP-202ENST00000535202 KRTAP13-3Q3SY46 172 aa4.81□□□□□ -1.64
SFSWAP-202ENST00000535202 TP53AIP1Q9HCN2 124 aa4.81□□□□□ -1.64
SFSWAP-202ENST00000535202 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
SFSWAP-202ENST00000535202 FAT4Q6V0I7 4981 aa4.8□□□□□ -1.64
SFSWAP-202ENST00000535202 LINC00313P59037 77 aa4.79□□□□□ -1.64
SFSWAP-202ENST00000535202 A8MWP4 228 aa4.78□□□□□ -1.64
SFSWAP-202ENST00000535202 DEFB105AQ8NG35 78 aa4.78□□□□□ -1.64
SFSWAP-202ENST00000535202 SPRR1BP22528 89 aa4.76□□□□□ -1.65
SFSWAP-202ENST00000535202 WFDC13Q8IUB5 93 aa4.76□□□□□ -1.65
SFSWAP-202ENST00000535202 SPINK7P58062 85 aa4.75□□□□□ -1.65
SFSWAP-202ENST00000535202 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
SFSWAP-202ENST00000535202 SEC61BP60468 96 aaKnown RBP4.74□□□□□ -1.65
SFSWAP-202ENST00000535202 IGFL1Q6UW32 110 aa4.73□□□□□ -1.65
SFSWAP-202ENST00000535202 XP32Q5T750 250 aa4.72□□□□□ -1.65
SFSWAP-202ENST00000535202 SPATA8Q6RVD6 105 aa4.72□□□□□ -1.65
SFSWAP-202ENST00000535202 LINC00472Q9H8W2 130 aa4.72□□□□□ -1.65
SFSWAP-202ENST00000535202 KRTAP4-1Q9BYQ7 146 aa4.71□□□□□ -1.66
SFSWAP-202ENST00000535202 HRES1P13985 223 aa4.7□□□□□ -1.66
SFSWAP-202ENST00000535202 KRTAP9-2Q9BYQ4 174 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms