RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 TP53AIP1Q9HCN2 124 aa7.78□□□□□ -1.16
BEST1-208ENST00000534553 IGHV6-1A0A0B4J1U7 121 aa7.78□□□□□ -1.16
BEST1-208ENST00000534553 H3BPC8 53 aa7.78□□□□□ -1.16
BEST1-208ENST00000534553 SPINK1P00995 79 aa7.78□□□□□ -1.16
BEST1-208ENST00000534553 MP68P56378 58 aa7.78□□□□□ -1.16
BEST1-208ENST00000534553 RPS29P62273 56 aaKnown RBP7.77□□□□□ -1.17
BEST1-208ENST00000534553 C8orf87E5RJ46 101 aa7.76□□□□□ -1.17
BEST1-208ENST00000534553 SMR3BP02814 79 aaPredicted RBP7.76□□□□□ -1.17
BEST1-208ENST00000534553 ATP5EP56381 51 aaPredicted RBP7.76□□□□□ -1.17
BEST1-208ENST00000534553 SPAG11AQ6PDA7 123 aa7.76□□□□□ -1.17
BEST1-208ENST00000534553 FAM236DA0A1B0GTK5 79 aa7.73□□□□□ -1.17
BEST1-208ENST00000534553 FAM236CP0DP71 79 aa7.73□□□□□ -1.17
BEST1-208ENST00000534553 KRTAP10-4P60372 401 aaPredicted RBP7.73□□□□□ -1.17
BEST1-208ENST00000534553 MRPL34Q9BQ48 92 aaKnown RBP7.73□□□□□ -1.17
BEST1-208ENST00000534553 ZCCHC13Q8WW36 166 aaKnown RBP7.72□□□□□ -1.17
BEST1-208ENST00000534553 RPS28P62857 69 aaKnown RBP7.71□□□□□ -1.17
BEST1-208ENST00000534553 C1orf195Q5TG92 126 aa7.71□□□□□ -1.17
BEST1-208ENST00000534553 FAM229AH3BQW9 127 aa7.71□□□□□ -1.18
BEST1-208ENST00000534553 LINC00304Q8N9R0 145 aa7.71□□□□□ -1.18
BEST1-208ENST00000534553 TRAV22A0A0B4J277 110 aa7.7□□□□□ -1.18
BEST1-208ENST00000534553 FAT1Q14517 4588 aa7.7□□□□□ -1.18
BEST1-208ENST00000534553 H0Y9P7 68 aa7.69□□□□□ -1.18
BEST1-208ENST00000534553 PRR26Q8N8Z3 221 aa7.68□□□□□ -1.18
BEST1-208ENST00000534553 NDUFS5O43920 106 aa7.66□□□□□ -1.18
BEST1-208ENST00000534553 LINC00313P59037 77 aa7.66□□□□□ -1.18
BEST1-208ENST00000534553 RYR3Q15413 4870 aa7.65□□□□□ -1.18
BEST1-208ENST00000534553 LINC00208Q96KT6 92 aa7.65□□□□□ -1.18
BEST1-208ENST00000534553 PKHD1L1Q86WI1 4243 aa7.65□□□□□ -1.18
BEST1-208ENST00000534553 NOTCH2NLQ7Z3S9 236 aa7.63□□□□□ -1.19
BEST1-208ENST00000534553 C1orf64Q8NEQ6 169 aa7.62□□□□□ -1.19
BEST1-208ENST00000534553 SERP1Q9Y6X1 66 aa7.62□□□□□ -1.19
BEST1-208ENST00000534553 Q8N9P0 234 aaPredicted RBP7.6□□□□□ -1.19
BEST1-208ENST00000534553 HSPG2P98160 4391 aa7.59□□□□□ -1.2
BEST1-208ENST00000534553 Q5VSD8 79 aa7.58□□□□□ -1.2
BEST1-208ENST00000534553 SPANXA2-OT1Q8N9U9 137 aa7.58□□□□□ -1.2
BEST1-208ENST00000534553 LOC101927531A0A1B0GV80 90 aa7.56□□□□□ -1.2
BEST1-208ENST00000534553 RYR1P21817 5038 aa7.55□□□□□ -1.2
BEST1-208ENST00000534553 CYP4F30PQ9H0H9 118 aa7.55□□□□□ -1.2
BEST1-208ENST00000534553 KRTAP16-1A8MUX0 517 aa7.54□□□□□ -1.2
BEST1-208ENST00000534553 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
BEST1-208ENST00000534553 IGLV7-46A0A075B6I9 117 aa7.48□□□□□ -1.21
BEST1-208ENST00000534553 KRTAP10-8P60410 259 aa7.48□□□□□ -1.21
BEST1-208ENST00000534553 OXTP01178 125 aa7.47□□□□□ -1.21
BEST1-208ENST00000534553 Q5W150 140 aa7.47□□□□□ -1.21
BEST1-208ENST00000534553 Q8N1X5 172 aa7.46□□□□□ -1.21
BEST1-208ENST00000534553 TNXBP22105 4242 aa7.46□□□□□ -1.22
BEST1-208ENST00000534553 SMIM26A0A096LP01 95 aa7.45□□□□□ -1.22
BEST1-208ENST00000534553 PCOTHQ58A44 107 aa7.43□□□□□ -1.22
BEST1-208ENST00000534553 FP248Q71RG6 208 aaPredicted RBP7.41□□□□□ -1.22
BEST1-208ENST00000534553 IGKV2-30P06310 120 aa7.4□□□□□ -1.23
BEST1-208ENST00000534553 PRR4Q16378 134 aa7.4□□□□□ -1.23
BEST1-208ENST00000534553 FAT3Q8TDW7 4589 aa7.4□□□□□ -1.23
BEST1-208ENST00000534553 C20orf166-AS1Q96NR2 134 aa7.39□□□□□ -1.23
BEST1-208ENST00000534553 A8MUU9 505 aa7.37□□□□□ -1.23
BEST1-208ENST00000534553 KIAA1109Q2LD37 5005 aa7.37□□□□□ -1.23
BEST1-208ENST00000534553 LRP1Q07954 4544 aaKnown RBP7.36□□□□□ -1.23
BEST1-208ENST00000534553 EPPK1P58107 5090 aaKnown RBP7.36□□□□□ -1.23
BEST1-208ENST00000534553 FLG2Q5D862 2391 aaPredicted RBP7.35□□□□□ -1.23
BEST1-208ENST00000534553 RETNLBQ9BQ08 111 aa7.35□□□□□ -1.23
BEST1-208ENST00000534553 C9orf92A6NGG3 77 aa7.33□□□□□ -1.24
BEST1-208ENST00000534553 C7orf65Q6ZTY9 151 aa7.32□□□□□ -1.24
BEST1-208ENST00000534553 HRES1P13985 223 aa7.31□□□□□ -1.24
BEST1-208ENST00000534553 Q75L30 129 aa7.31□□□□□ -1.24
BEST1-208ENST00000534553 COA5Q86WW8 74 aa7.3□□□□□ -1.24
BEST1-208ENST00000534553 IGKV2D-30A0A075B6S6 120 aa7.29□□□□□ -1.24
BEST1-208ENST00000534553 KRTAP17-1Q9BYP8 105 aa7.29□□□□□ -1.24
BEST1-208ENST00000534553 MT1HL1P0DM35 61 aa7.29□□□□□ -1.24
BEST1-208ENST00000534553 ACYP2P14621 99 aa7.28□□□□□ -1.24
BEST1-208ENST00000534553 DMAC1Q96GE9 116 aa7.28□□□□□ -1.24
BEST1-208ENST00000534553 V9GYY9 64 aa7.28□□□□□ -1.24
BEST1-208ENST00000534553 Q1T7F1 81 aa7.26□□□□□ -1.25
BEST1-208ENST00000534553 MYCBP2O75592 4640 aa7.24□□□□□ -1.25
BEST1-208ENST00000534553 MPLKIPQ8TAP9 179 aa7.22□□□□□ -1.25
BEST1-208ENST00000534553 C4orf26Q17RF5 130 aa7.22□□□□□ -1.25
BEST1-208ENST00000534553 A8MUN3 132 aa7.2□□□□□ -1.26
BEST1-208ENST00000534553 ATP11AUNQ6ZP68 121 aa7.19□□□□□ -1.26
BEST1-208ENST00000534553 DMBT1Q9UGM3 2413 aaPredicted RBP7.18□□□□□ -1.26
BEST1-208ENST00000534553 RPL37P61927 97 aaKnown RBP7.17□□□□□ -1.26
BEST1-208ENST00000534553 CHKB-CPT1BH3BT56 60 aa7.17□□□□□ -1.26
BEST1-208ENST00000534553 KRTAP4-5Q9BYR2 181 aa7.15□□□□□ -1.26
BEST1-208ENST00000534553 XP32Q5T750 250 aa7.15□□□□□ -1.27
BEST1-208ENST00000534553 LCE2DQ5TA82 110 aaPredicted RBP7.15□□□□□ -1.27
BEST1-208ENST00000534553 BIRC6Q9NR09 4857 aa7.14□□□□□ -1.27
BEST1-208ENST00000534553 SPINK7P58062 85 aa7.14□□□□□ -1.27
BEST1-208ENST00000534553 TPRXLQ17RH7 258 aa7.13□□□□□ -1.27
BEST1-208ENST00000534553 LINC01558Q9Y6Z2 57 aa7.09□□□□□ -1.27
BEST1-208ENST00000534553 J3QL48 77 aa7.06□□□□□ -1.28
BEST1-208ENST00000534553 PSPHP1O15172 72 aa7.05□□□□□ -1.28
BEST1-208ENST00000534553 HERC2O95714 4834 aa7.04□□□□□ -1.28
BEST1-208ENST00000534553 SPTSSBQ8NFR3 76 aa7.04□□□□□ -1.28
BEST1-208ENST00000534553 PRR15LQ9BU68 103 aa7.04□□□□□ -1.28
BEST1-208ENST00000534553 COX6B2Q6YFQ2 88 aa7.02□□□□□ -1.29
BEST1-208ENST00000534553 Q5VV11 94 aa7.01□□□□□ -1.29
BEST1-208ENST00000534553 ABCA13Q86UQ4 5058 aa7.01□□□□□ -1.29
BEST1-208ENST00000534553 KRTAP3-1Q9BYR8 98 aa6.96□□□□□ -1.3
BEST1-208ENST00000534553 BRK1Q8WUW1 75 aa6.94□□□□□ -1.3
BEST1-208ENST00000534553 PRO0628Q9UI54 55 aa6.94□□□□□ -1.3
BEST1-208ENST00000534553 A0A1B0GU69 56 aa6.93□□□□□ -1.3
BEST1-208ENST00000534553 A6NED7 52 aa6.89□□□□□ -1.31
BEST1-208ENST00000534553 SEC61BP60468 96 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms