RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 CELSR2Q9HCU4 2923 aa1.77□□□□□ -2.13
CSDE1-216ENST00000534389 A0A087WTM6 91 aa1.77□□□□□ -2.13
CSDE1-216ENST00000534389 Q6ZSA8 131 aa1.77□□□□□ -2.13
CSDE1-216ENST00000534389 KRTAP13-1Q8IUC0 172 aa1.77□□□□□ -2.13
CSDE1-216ENST00000534389 SONP18583 2426 aaKnown RBP1.77□□□□□ -2.13
CSDE1-216ENST00000534389 HIVEP2P31629 2446 aa1.77□□□□□ -2.13
CSDE1-216ENST00000534389 MUC6Q6W4X9 2439 aa1.77□□□□□ -2.13
CSDE1-216ENST00000534389 NF1P21359 2839 aa1.76□□□□□ -2.13
CSDE1-216ENST00000534389 DNAH1Q9P2D7 4330 aa1.76□□□□□ -2.13
CSDE1-216ENST00000534389 H3BNG1 76 aa1.76□□□□□ -2.13
CSDE1-216ENST00000534389 KRTAP12-2P59991 146 aa1.76□□□□□ -2.13
CSDE1-216ENST00000534389 TPRXLQ17RH7 258 aa1.76□□□□□ -2.13
CSDE1-216ENST00000534389 DEFB113Q30KQ7 82 aa1.76□□□□□ -2.13
CSDE1-216ENST00000534389 CAMK2N1Q7Z7J9 78 aa1.76□□□□□ -2.13
CSDE1-216ENST00000534389 DEFB123Q8N688 67 aa1.76□□□□□ -2.13
CSDE1-216ENST00000534389 NBEAL2Q6ZNJ1 2754 aa1.76□□□□□ -2.13
CSDE1-216ENST00000534389 TEX15Q9BXT5 2789 aa1.76□□□□□ -2.13
CSDE1-216ENST00000534389 TENM2Q9NT68 2774 aa1.76□□□□□ -2.13
CSDE1-216ENST00000534389 NAV2Q8IVL1 2488 aa1.75□□□□□ -2.13
CSDE1-216ENST00000534389 FLG2Q5D862 2391 aaPredicted RBP1.75□□□□□ -2.13
CSDE1-216ENST00000534389 PANO1I0J062 215 aa1.75□□□□□ -2.13
CSDE1-216ENST00000534389 C20orf166-AS1Q96NR2 134 aa1.75□□□□□ -2.13
CSDE1-216ENST00000534389 USP9YO00507 2555 aaPredicted RBP1.75□□□□□ -2.13
CSDE1-216ENST00000534389 AKAP9Q99996 3911 aa1.74□□□□□ -2.13
CSDE1-216ENST00000534389 CEP295Q9C0D2 2601 aa1.74□□□□□ -2.13
CSDE1-216ENST00000534389 NBPF19A0A087WUL8 3843 aa1.74□□□□□ -2.13
CSDE1-216ENST00000534389 USP9XQ93008 2570 aaPredicted RBP1.74□□□□□ -2.13
CSDE1-216ENST00000534389 LAMA5O15230 3695 aa1.74□□□□□ -2.13
CSDE1-216ENST00000534389 PSORS1C2Q9UIG4 136 aa1.74□□□□□ -2.13
CSDE1-216ENST00000534389 ANK3Q12955 4377 aaKnown RBP1.74□□□□□ -2.13
CSDE1-216ENST00000534389 MYO9AB2RTY4 2548 aa1.74□□□□□ -2.13
CSDE1-216ENST00000534389 EPG5Q9HCE0 2579 aa1.73□□□□□ -2.13
CSDE1-216ENST00000534389 UBR5O95071 2799 aaPredicted RBP1.73□□□□□ -2.13
CSDE1-216ENST00000534389 FBN2P35556 2912 aa1.73□□□□□ -2.13
CSDE1-216ENST00000534389 GCN1Q92616 2671 aaKnown RBP1.73□□□□□ -2.13
CSDE1-216ENST00000534389 NUPR2A6NF83 97 aa1.73□□□□□ -2.13
CSDE1-216ENST00000534389 MXRA5Q9NR99 2828 aa1.73□□□□□ -2.13
CSDE1-216ENST00000534389 ZANQ9Y493 2812 aa1.73□□□□□ -2.13
CSDE1-216ENST00000534389 CRYBG3Q68DQ2 2970 aa1.73□□□□□ -2.13
CSDE1-216ENST00000534389 LY6G6CO95867 125 aa1.72□□□□□ -2.13
CSDE1-216ENST00000534389 NIPBLQ6KC79 2804 aaeCLIP1.72□□□□□ -2.13
CSDE1-216ENST00000534389 UNC79Q9P2D8 2635 aa1.72□□□□□ -2.13
CSDE1-216ENST00000534389 UTP20O75691 2785 aaKnown RBP1.71□□□□□ -2.14
CSDE1-216ENST00000534389 POLQO75417 2590 aa1.71□□□□□ -2.14
CSDE1-216ENST00000534389 CFAP46Q8IYW2 2715 aa1.71□□□□□ -2.14
CSDE1-216ENST00000534389 SPINK1P00995 79 aa1.71□□□□□ -2.14
CSDE1-216ENST00000534389 H1FX-AS1Q4G0G2 97 aa1.71□□□□□ -2.14
CSDE1-216ENST00000534389 LCE3EQ5T5B0 92 aa1.71□□□□□ -2.14
CSDE1-216ENST00000534389 SSBP3-AS1Q7Z2R9 100 aa1.71□□□□□ -2.14
CSDE1-216ENST00000534389 BDP1A6H8Y1 2624 aa1.71□□□□□ -2.14
CSDE1-216ENST00000534389 MTORP42345 2549 aa1.71□□□□□ -2.14
CSDE1-216ENST00000534389 DOPEY1Q5JWR5 2465 aa1.71□□□□□ -2.14
CSDE1-216ENST00000534389 PKD1L2Q7Z442 2459 aa1.71□□□□□ -2.14
CSDE1-216ENST00000534389 CCDC168Q8NDH2 2452 aa1.71□□□□□ -2.14
CSDE1-216ENST00000534389 SRRM2Q9UQ35 2752 aaKnown RBP1.7□□□□□ -2.14
CSDE1-216ENST00000534389 ZNF292O60281 2723 aa1.7□□□□□ -2.14
CSDE1-216ENST00000534389 A0A1B0GU33 70 aa1.7□□□□□ -2.14
CSDE1-216ENST00000534389 SPINK6Q6UWN8 80 aa1.7□□□□□ -2.14
CSDE1-216ENST00000534389 C10orf95Q9H7T3 257 aa1.7□□□□□ -2.14
CSDE1-216ENST00000534389 ZFHX2Q9C0A1 2572 aaPredicted RBP1.7□□□□□ -2.14
CSDE1-216ENST00000534389 SETD2Q9BYW2 2564 aaPredicted RBP1.69□□□□□ -2.14
CSDE1-216ENST00000534389 CHD8Q9HCK8 2581 aa1.69□□□□□ -2.14
CSDE1-216ENST00000534389 LRRK2Q5S007 2527 aa1.69□□□□□ -2.14
CSDE1-216ENST00000534389 SPINT4Q6UDR6 99 aa1.69□□□□□ -2.14
CSDE1-216ENST00000534389 HIVEP1P15822 2718 aa1.69□□□□□ -2.14
CSDE1-216ENST00000534389 DNAH8Q96JB1 4490 aa1.68□□□□□ -2.14
CSDE1-216ENST00000534389 VPS13CQ709C8 3753 aa1.68□□□□□ -2.14
CSDE1-216ENST00000534389 TTC28Q96AY4 2481 aa1.67□□□□□ -2.14
CSDE1-216ENST00000534389 NBDYA0A0U1RRE5 68 aa1.67□□□□□ -2.14
CSDE1-216ENST00000534389 ACACBO00763 2458 aa1.66□□□□□ -2.14
CSDE1-216ENST00000534389 MUC3AQ02505 3323 aa1.66□□□□□ -2.14
CSDE1-216ENST00000534389 KRTAP13-4Q3LI77 160 aa1.66□□□□□ -2.14
CSDE1-216ENST00000534389 COX6B2Q6YFQ2 88 aa1.66□□□□□ -2.14
CSDE1-216ENST00000534389 TENM3Q9P273 2699 aa1.66□□□□□ -2.14
CSDE1-216ENST00000534389 KMT2BQ9UMN6 2715 aaPredicted RBP1.66□□□□□ -2.14
CSDE1-216ENST00000534389 BAHCC1Q9P281 2608 aa1.66□□□□□ -2.14
CSDE1-216ENST00000534389 ZNF462Q96JM2 2506 aa1.65□□□□□ -2.15
CSDE1-216ENST00000534389 CIRBP-AS1Q8TBR5 109 aa1.65□□□□□ -2.15
CSDE1-216ENST00000534389 CSMD2Q7Z408 3487 aa1.64□□□□□ -2.15
CSDE1-216ENST00000534389 PKD1L1Q8TDX9 2849 aa1.64□□□□□ -2.15
CSDE1-216ENST00000534389 LUZP6Q538Z0 58 aa1.64□□□□□ -2.15
CSDE1-216ENST00000534389 SPACA4Q8TDM5 124 aa1.64□□□□□ -2.15
CSDE1-216ENST00000534389 VWFP04275 2813 aa1.64□□□□□ -2.15
CSDE1-216ENST00000534389 DNAH10Q8IVF4 4471 aa1.64□□□□□ -2.15
CSDE1-216ENST00000534389 FBN1P35555 2871 aaKnown RBP1.63□□□□□ -2.15
CSDE1-216ENST00000534389 PIEZO1Q92508 2521 aa1.63□□□□□ -2.15
CSDE1-216ENST00000534389 ITPR3Q14573 2671 aa1.63□□□□□ -2.15
CSDE1-216ENST00000534389 KRTAP13-2Q52LG2 175 aa1.63□□□□□ -2.15
CSDE1-216ENST00000534389 SMR3AQ99954 134 aa1.63□□□□□ -2.15
CSDE1-216ENST00000534389 HECTD1Q9ULT8 2610 aa1.63□□□□□ -2.15
CSDE1-216ENST00000534389 VPS13DQ5THJ4 4388 aa1.63□□□□□ -2.15
CSDE1-216ENST00000534389 DNAH17Q9UFH2 4485 aa1.62□□□□□ -2.15
CSDE1-216ENST00000534389 Q6ZRN7 208 aaPredicted RBP1.62□□□□□ -2.15
CSDE1-216ENST00000534389 ACANP16112 2415 aa1.62□□□□□ -2.15
CSDE1-216ENST00000534389 CENPEQ02224 2701 aa1.62□□□□□ -2.15
CSDE1-216ENST00000534389 ABCA12Q86UK0 2595 aa1.61□□□□□ -2.15
CSDE1-216ENST00000534389 CUBNO60494 3623 aa1.61□□□□□ -2.15
CSDE1-216ENST00000534389 A0A0D9SG42 100 aa1.61□□□□□ -2.15
CSDE1-216ENST00000534389 K7ERS5 55 aa1.61□□□□□ -2.15
CSDE1-216ENST00000534389 RPL37P61927 97 aaKnown RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms