RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 SIGMAR1Q99720 223 aa7.35□□□□□ -1.23
SHARPIN-208ENST00000533948 RBM3P98179 157 aaKnown RBP7.34□□□□□ -1.23
SHARPIN-208ENST00000533948 VPS25Q9BRG1 176 aa7.34□□□□□ -1.23
SHARPIN-208ENST00000533948 A8MUU9 505 aa7.33□□□□□ -1.24
SHARPIN-208ENST00000533948 KRTAP19-1Q8IUB9 90 aa7.33□□□□□ -1.24
SHARPIN-208ENST00000533948 TRBV7-4A0A0J9YYF1 115 aa7.32□□□□□ -1.24
SHARPIN-208ENST00000533948 JMJD7-PLA2G4BH0Y9G9 81 aa7.32□□□□□ -1.24
SHARPIN-208ENST00000533948 H3BT86 120 aa7.32□□□□□ -1.24
SHARPIN-208ENST00000533948 DSCR8Q96T75 97 aa7.32□□□□□ -1.24
SHARPIN-208ENST00000533948 CCKP06307 115 aa7.31□□□□□ -1.24
SHARPIN-208ENST00000533948 IGKV4-1P06312 121 aa7.31□□□□□ -1.24
SHARPIN-208ENST00000533948 DSCR10P59022 87 aa7.31□□□□□ -1.24
SHARPIN-208ENST00000533948 K7EP34 96 aa7.29□□□□□ -1.24
SHARPIN-208ENST00000533948 LCE2BO14633 110 aa7.29□□□□□ -1.24
SHARPIN-208ENST00000533948 DEFB116Q30KQ4 102 aa7.29□□□□□ -1.24
SHARPIN-208ENST00000533948 GTF2H5Q6ZYL4 71 aa7.28□□□□□ -1.24
SHARPIN-208ENST00000533948 MTURNQ8N3F0 131 aa7.28□□□□□ -1.24
SHARPIN-208ENST00000533948 SYNE2Q8WXH0 6885 aaKnown RBP7.28□□□□□ -1.24
SHARPIN-208ENST00000533948 MT2AP02795 61 aa7.27□□□□□ -1.25
SHARPIN-208ENST00000533948 LINC00313P59037 77 aa7.27□□□□□ -1.25
SHARPIN-208ENST00000533948 MACF1Q9UPN3 7388 aaKnown RBP7.27□□□□□ -1.25
SHARPIN-208ENST00000533948 LINC00472Q9H8W2 130 aa7.26□□□□□ -1.25
SHARPIN-208ENST00000533948 PDE6GP18545 87 aa7.25□□□□□ -1.25
SHARPIN-208ENST00000533948 LOC110117498A0A087WWA1 95 aa7.24□□□□□ -1.25
SHARPIN-208ENST00000533948 KRTAP16-1A8MUX0 517 aa7.24□□□□□ -1.25
SHARPIN-208ENST00000533948 C21orf62-AS1Q17RA5 79 aa7.24□□□□□ -1.25
SHARPIN-208ENST00000533948 NOTCH2NLQ7Z3S9 236 aa7.24□□□□□ -1.25
SHARPIN-208ENST00000533948 IGHV6-1A0A0B4J1U7 121 aa7.23□□□□□ -1.25
SHARPIN-208ENST00000533948 MT1FP04733 61 aa7.23□□□□□ -1.25
SHARPIN-208ENST00000533948 C14orf132Q9NPU4 83 aa7.23□□□□□ -1.25
SHARPIN-208ENST00000533948 FAM236DA0A1B0GTK5 79 aa7.22□□□□□ -1.25
SHARPIN-208ENST00000533948 FAM236CP0DP71 79 aa7.22□□□□□ -1.25
SHARPIN-208ENST00000533948 Q6ZQT0 140 aa7.22□□□□□ -1.25
SHARPIN-208ENST00000533948 PRO0461Q9UI25 63 aa7.2□□□□□ -1.26
SHARPIN-208ENST00000533948 A0A1B0GW54 56 aa7.19□□□□□ -1.26
SHARPIN-208ENST00000533948 SMCPP49901 116 aaPredicted RBP7.19□□□□□ -1.26
SHARPIN-208ENST00000533948 KRTAP10-10P60014 251 aa7.19□□□□□ -1.26
SHARPIN-208ENST00000533948 KRTAP9-3Q9BYQ3 159 aa7.19□□□□□ -1.26
SHARPIN-208ENST00000533948 LINC00846Q9NV44 126 aa7.18□□□□□ -1.26
SHARPIN-208ENST00000533948 F8W1H4 67 aa7.17□□□□□ -1.26
SHARPIN-208ENST00000533948 RBM12B-AS1Q9P1G2 102 aa7.15□□□□□ -1.26
SHARPIN-208ENST00000533948 A0A1B0GVX0 72 aa7.14□□□□□ -1.27
SHARPIN-208ENST00000533948 C8orf87E5RJ46 101 aa7.13□□□□□ -1.27
SHARPIN-208ENST00000533948 NDUFB1O75438 58 aa7.13□□□□□ -1.27
SHARPIN-208ENST00000533948 J3KT08 172 aa7.12□□□□□ -1.27
SHARPIN-208ENST00000533948 HRES1P13985 223 aa7.1□□□□□ -1.27
SHARPIN-208ENST00000533948 NREPQ16612 68 aa7.09□□□□□ -1.27
SHARPIN-208ENST00000533948 MPLKIPQ8TAP9 179 aa7.09□□□□□ -1.27
SHARPIN-208ENST00000533948 A0A1B0GV90 55 aa7.08□□□□□ -1.28
SHARPIN-208ENST00000533948 ETDBQ3ZM63 59 aa7.08□□□□□ -1.28
SHARPIN-208ENST00000533948 KRTAP19-6Q3LI70 58 aa7.05□□□□□ -1.28
SHARPIN-208ENST00000533948 ZCCHC13Q8WW36 166 aaKnown RBP7.04□□□□□ -1.28
SHARPIN-208ENST00000533948 A8MWP4 228 aa7.02□□□□□ -1.29
SHARPIN-208ENST00000533948 Q8N9P0 234 aaPredicted RBP7.02□□□□□ -1.29
SHARPIN-208ENST00000533948 IGKV3D-7A0A0C4DH55 119 aa7.01□□□□□ -1.29
SHARPIN-208ENST00000533948 UBL5Q9BZL1 73 aa7.01□□□□□ -1.29
SHARPIN-208ENST00000533948 C8orf17Q9NRJ1 99 aa7.01□□□□□ -1.29
SHARPIN-208ENST00000533948 Q6ZVQ6 151 aa7□□□□□ -1.29
SHARPIN-208ENST00000533948 BPY2O14599 106 aa6.99□□□□□ -1.29
SHARPIN-208ENST00000533948 SPINK7P58062 85 aa6.99□□□□□ -1.29
SHARPIN-208ENST00000533948 KRTAP6-3Q3LI67 103 aa6.99□□□□□ -1.29
SHARPIN-208ENST00000533948 PRR15Q8IV56 129 aa6.96□□□□□ -1.3
SHARPIN-208ENST00000533948 NDUFS5O43920 106 aa6.95□□□□□ -1.3
SHARPIN-208ENST00000533948 ACYP1P07311 99 aa6.94□□□□□ -1.3
SHARPIN-208ENST00000533948 FAM240AA0A1B0GVK7 77 aa6.92□□□□□ -1.3
SHARPIN-208ENST00000533948 K7EQZ3 153 aa6.92□□□□□ -1.3
SHARPIN-208ENST00000533948 MMP24-AS1A0A0U1RRL7 71 aa6.91□□□□□ -1.3
SHARPIN-208ENST00000533948 WFDC13Q8IUB5 93 aa6.89□□□□□ -1.31
SHARPIN-208ENST00000533948 TMEM254Q8TBM7 123 aa6.89□□□□□ -1.31
SHARPIN-208ENST00000533948 MRPL34Q9BQ48 92 aaKnown RBP6.89□□□□□ -1.31
SHARPIN-208ENST00000533948 NEBP20929 6669 aa6.88□□□□□ -1.31
SHARPIN-208ENST00000533948 hDV103S1A0JD37 113 aa6.88□□□□□ -1.31
SHARPIN-208ENST00000533948 CXCL6P80162 114 aa6.87□□□□□ -1.31
SHARPIN-208ENST00000533948 Q8N9L7 120 aa6.87□□□□□ -1.31
SHARPIN-208ENST00000533948 J3QR89 54 aa6.85□□□□□ -1.31
SHARPIN-208ENST00000533948 ATP5EP2Q5VTU8 51 aa6.82□□□□□ -1.32
SHARPIN-208ENST00000533948 CASC2Q6XLA1 102 aa6.81□□□□□ -1.32
SHARPIN-208ENST00000533948 MUC12Q9UKN1 5478 aa6.8□□□□□ -1.32
SHARPIN-208ENST00000533948 IGKV2D-30A0A075B6S6 120 aa6.8□□□□□ -1.32
SHARPIN-208ENST00000533948 IGKV2-30P06310 120 aa6.8□□□□□ -1.32
SHARPIN-208ENST00000533948 HCG22E2RYF7 251 aa6.79□□□□□ -1.32
SHARPIN-208ENST00000533948 Q5W150 140 aa6.78□□□□□ -1.32
SHARPIN-208ENST00000533948 LINC00643Q86TS7 51 aa6.78□□□□□ -1.32
SHARPIN-208ENST00000533948 H1FX-AS1Q4G0G2 97 aa6.75□□□□□ -1.33
SHARPIN-208ENST00000533948 K7ERU9 68 aa6.72□□□□□ -1.33
SHARPIN-208ENST00000533948 HIST1H4AP62805 103 aaKnown RBP6.72□□□□□ -1.33
SHARPIN-208ENST00000533948 C7orf65Q6ZTY9 151 aa6.72□□□□□ -1.33
SHARPIN-208ENST00000533948 KRTAP20-1Q3LI63 56 aa6.71□□□□□ -1.34
SHARPIN-208ENST00000533948 TP53AIP1Q9HCN2 124 aa6.66□□□□□ -1.34
SHARPIN-208ENST00000533948 C4orf26Q17RF5 130 aa6.65□□□□□ -1.34
SHARPIN-208ENST00000533948 A0A087WVE0 104 aa6.63□□□□□ -1.35
SHARPIN-208ENST00000533948 A6NN06 94 aa6.61□□□□□ -1.35
SHARPIN-208ENST00000533948 KRTAP3-1Q9BYR8 98 aa6.56□□□□□ -1.36
SHARPIN-208ENST00000533948 IMUPQ9GZP8 106 aa6.56□□□□□ -1.36
SHARPIN-208ENST00000533948 UQCRQO14949 82 aa6.55□□□□□ -1.36
SHARPIN-208ENST00000533948 TRAV22A0A0B4J277 110 aa6.54□□□□□ -1.36
SHARPIN-208ENST00000533948 MT-ATP8P03928 68 aa6.54□□□□□ -1.36
SHARPIN-208ENST00000533948 MDN1Q9NU22 5596 aa6.54□□□□□ -1.36
SHARPIN-208ENST00000533948 C5orf47Q569G3 176 aa6.53□□□□□ -1.36
SHARPIN-208ENST00000533948 C1orf64Q8NEQ6 169 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms