RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 PSORS1C2Q9UIG4 136 aa4.92□□□□□ -1.62
NEDD8-207ENST00000533242 F8WEM9 126 aa4.91□□□□□ -1.62
NEDD8-207ENST00000533242 RPS28P62857 69 aaKnown RBP4.91□□□□□ -1.62
NEDD8-207ENST00000533242 TMEM254Q8TBM7 123 aa4.9□□□□□ -1.62
NEDD8-207ENST00000533242 A0A087WSZ3 146 aa4.9□□□□□ -1.63
NEDD8-207ENST00000533242 FAM236DA0A1B0GTK5 79 aa4.9□□□□□ -1.63
NEDD8-207ENST00000533242 FAM236CP0DP71 79 aa4.9□□□□□ -1.63
NEDD8-207ENST00000533242 IGLV8-61A0A075B6I0 122 aa4.89□□□□□ -1.63
NEDD8-207ENST00000533242 A0A1B0GW54 56 aa4.89□□□□□ -1.63
NEDD8-207ENST00000533242 H3BS24 57 aa4.89□□□□□ -1.63
NEDD8-207ENST00000533242 KRTAP9-6A0A140TA67 174 aa4.88□□□□□ -1.63
NEDD8-207ENST00000533242 UBE2AP49459 152 aa4.88□□□□□ -1.63
NEDD8-207ENST00000533242 KRTAP13-1Q8IUC0 172 aa4.88□□□□□ -1.63
NEDD8-207ENST00000533242 PRR26Q8N8Z3 221 aa4.88□□□□□ -1.63
NEDD8-207ENST00000533242 LPAP08519 4548 aa4.88□□□□□ -1.63
NEDD8-207ENST00000533242 H0Y9J4 135 aa4.86□□□□□ -1.63
NEDD8-207ENST00000533242 SPRR1BP22528 89 aa4.86□□□□□ -1.63
NEDD8-207ENST00000533242 Q5XG85 94 aa4.86□□□□□ -1.63
NEDD8-207ENST00000533242 IGLV7-43P04211 117 aa4.85□□□□□ -1.63
NEDD8-207ENST00000533242 PRR4Q16378 134 aa4.85□□□□□ -1.63
NEDD8-207ENST00000533242 C4orf26Q17RF5 130 aa4.84□□□□□ -1.64
NEDD8-207ENST00000533242 WFDC13Q8IUB5 93 aa4.84□□□□□ -1.64
NEDD8-207ENST00000533242 HCG22E2RYF7 251 aa4.83□□□□□ -1.64
NEDD8-207ENST00000533242 KRTAP1-4P0C5Y4 121 aa4.82□□□□□ -1.64
NEDD8-207ENST00000533242 SERP1Q9Y6X1 66 aa4.82□□□□□ -1.64
NEDD8-207ENST00000533242 NDUFC1O43677 76 aa4.81□□□□□ -1.64
NEDD8-207ENST00000533242 LINC00472Q9H8W2 130 aa4.81□□□□□ -1.64
NEDD8-207ENST00000533242 ANAPC11Q9NYG5 84 aa4.81□□□□□ -1.64
NEDD8-207ENST00000533242 IGLV9-49A0A0B4J1Y8 123 aa4.8□□□□□ -1.64
NEDD8-207ENST00000533242 FAM229BQ4G0N7 80 aa4.8□□□□□ -1.64
NEDD8-207ENST00000533242 ZCCHC13Q8WW36 166 aaKnown RBP4.8□□□□□ -1.64
NEDD8-207ENST00000533242 FP248Q71RG6 208 aaPredicted RBP4.8□□□□□ -1.64
NEDD8-207ENST00000533242 C5orf47Q569G3 176 aa4.79□□□□□ -1.64
NEDD8-207ENST00000533242 HRCT1Q6UXD1 115 aa4.79□□□□□ -1.64
NEDD8-207ENST00000533242 PRR15Q8IV56 129 aa4.78□□□□□ -1.64
NEDD8-207ENST00000533242 Q96NJ1 140 aa4.78□□□□□ -1.64
NEDD8-207ENST00000533242 FAT4Q6V0I7 4981 aa4.77□□□□□ -1.65
NEDD8-207ENST00000533242 A8MWP4 228 aa4.77□□□□□ -1.65
NEDD8-207ENST00000533242 MOBPQ13875 183 aa4.77□□□□□ -1.65
NEDD8-207ENST00000533242 LINC00483Q53H64 154 aa4.77□□□□□ -1.65
NEDD8-207ENST00000533242 CASC2Q6XLA1 102 aa4.75□□□□□ -1.65
NEDD8-207ENST00000533242 MMP24-AS1A0A0U1RRL7 71 aa4.75□□□□□ -1.65
NEDD8-207ENST00000533242 ATP5EP56381 51 aaPredicted RBP4.74□□□□□ -1.65
NEDD8-207ENST00000533242 ZNF861PO60384 105 aa4.73□□□□□ -1.65
NEDD8-207ENST00000533242 SMIM26A0A096LP01 95 aa4.73□□□□□ -1.65
NEDD8-207ENST00000533242 LINC00208Q96KT6 92 aa4.73□□□□□ -1.65
NEDD8-207ENST00000533242 A0A087X002 238 aa4.72□□□□□ -1.65
NEDD8-207ENST00000533242 NOTCH2NLQ7Z3S9 236 aa4.72□□□□□ -1.65
NEDD8-207ENST00000533242 C1orf64Q8NEQ6 169 aa4.71□□□□□ -1.66
NEDD8-207ENST00000533242 MUC2Q02817 5179 aa4.71□□□□□ -1.66
NEDD8-207ENST00000533242 TRAV22A0A0B4J277 110 aa4.71□□□□□ -1.66
NEDD8-207ENST00000533242 hDV103S1A0JD37 113 aa4.71□□□□□ -1.66
NEDD8-207ENST00000533242 H0Y9P7 68 aa4.71□□□□□ -1.66
NEDD8-207ENST00000533242 TYMSOSQ8TAI1 123 aa4.71□□□□□ -1.66
NEDD8-207ENST00000533242 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.66
NEDD8-207ENST00000533242 ASB16-AS1Q495Z4 193 aa4.69□□□□□ -1.66
NEDD8-207ENST00000533242 TPRXLQ17RH7 258 aa4.69□□□□□ -1.66
NEDD8-207ENST00000533242 MUC17Q685J3 4493 aa4.69□□□□□ -1.66
NEDD8-207ENST00000533242 MP68P56378 58 aa4.68□□□□□ -1.66
NEDD8-207ENST00000533242 ZNF706Q9Y5V0 76 aaPredicted RBP4.68□□□□□ -1.66
NEDD8-207ENST00000533242 IGHV6-1A0A0B4J1U7 121 aa4.68□□□□□ -1.66
NEDD8-207ENST00000533242 C8orf17Q9NRJ1 99 aa4.68□□□□□ -1.66
NEDD8-207ENST00000533242 NDUFB1O75438 58 aa4.67□□□□□ -1.66
NEDD8-207ENST00000533242 A0A1B0GVX0 72 aa4.66□□□□□ -1.66
NEDD8-207ENST00000533242 RETNLBQ9BQ08 111 aa4.66□□□□□ -1.66
NEDD8-207ENST00000533242 CYP4F30PQ9H0H9 118 aa4.66□□□□□ -1.66
NEDD8-207ENST00000533242 IGLV7-46A0A075B6I9 117 aa4.66□□□□□ -1.66
NEDD8-207ENST00000533242 KRTAP13-2Q52LG2 175 aa4.65□□□□□ -1.66
NEDD8-207ENST00000533242 LINC00304Q8N9R0 145 aa4.65□□□□□ -1.66
NEDD8-207ENST00000533242 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
NEDD8-207ENST00000533242 NDUFS5O43920 106 aa4.62□□□□□ -1.67
NEDD8-207ENST00000533242 PCOTHQ58A44 107 aa4.62□□□□□ -1.67
NEDD8-207ENST00000533242 H3BPC8 53 aa4.62□□□□□ -1.67
NEDD8-207ENST00000533242 CD164Q04900 197 aa4.62□□□□□ -1.67
NEDD8-207ENST00000533242 MRPL34Q9BQ48 92 aaKnown RBP4.61□□□□□ -1.67
NEDD8-207ENST00000533242 Q5W150 140 aa4.61□□□□□ -1.67
NEDD8-207ENST00000533242 SPANXA2-OT1Q8N9U9 137 aa4.61□□□□□ -1.67
NEDD8-207ENST00000533242 TP53AIP1Q9HCN2 124 aa4.59□□□□□ -1.67
NEDD8-207ENST00000533242 PSPHP1O15172 72 aa4.58□□□□□ -1.68
NEDD8-207ENST00000533242 Q1T7F1 81 aa4.58□□□□□ -1.68
NEDD8-207ENST00000533242 KRTAP13-3Q3SY46 172 aa4.58□□□□□ -1.68
NEDD8-207ENST00000533242 SSBP3-AS1Q7Z2R9 100 aa4.57□□□□□ -1.68
NEDD8-207ENST00000533242 SPAG11AQ6PDA7 123 aa4.57□□□□□ -1.68
NEDD8-207ENST00000533242 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
NEDD8-207ENST00000533242 Q8N9P0 234 aaPredicted RBP4.56□□□□□ -1.68
NEDD8-207ENST00000533242 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
NEDD8-207ENST00000533242 PRO0628Q9UI54 55 aa4.56□□□□□ -1.68
NEDD8-207ENST00000533242 SEC61BP60468 96 aaKnown RBP4.55□□□□□ -1.68
NEDD8-207ENST00000533242 C1orf195Q5TG92 126 aa4.55□□□□□ -1.68
NEDD8-207ENST00000533242 COA5Q86WW8 74 aa4.55□□□□□ -1.68
NEDD8-207ENST00000533242 A8MUN3 132 aa4.55□□□□□ -1.68
NEDD8-207ENST00000533242 A8MU10 97 aa4.53□□□□□ -1.68
NEDD8-207ENST00000533242 KRTAP16-1A8MUX0 517 aa4.51□□□□□ -1.69
NEDD8-207ENST00000533242 HRES1P13985 223 aa4.51□□□□□ -1.69
NEDD8-207ENST00000533242 Q5VV11 94 aa4.51□□□□□ -1.69
NEDD8-207ENST00000533242 LINC00313P59037 77 aa4.51□□□□□ -1.69
NEDD8-207ENST00000533242 C8orf87E5RJ46 101 aa4.49□□□□□ -1.69
NEDD8-207ENST00000533242 LOC101927531A0A1B0GV80 90 aa4.49□□□□□ -1.69
NEDD8-207ENST00000533242 SPINK1P00995 79 aa4.48□□□□□ -1.69
NEDD8-207ENST00000533242 XP32Q5T750 250 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms