RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 PKD1P98161 4303 aa7.31□□□□□ -1.24
CHD7-211ENST00000532149 SRRM2Q9UQ35 2752 aaKnown RBP7.31□□□□□ -1.24
CHD7-211ENST00000532149 H3BPC8 53 aa7.29□□□□□ -1.24
CHD7-211ENST00000532149 FAT2Q9NYQ8 4349 aa7.28□□□□□ -1.24
CHD7-211ENST00000532149 A0A1B0GVY2 172 aa7.28□□□□□ -1.24
CHD7-211ENST00000532149 ATP5EP56381 51 aaPredicted RBP7.28□□□□□ -1.24
CHD7-211ENST00000532149 C20orf197Q8N268 126 aa7.28□□□□□ -1.24
CHD7-211ENST00000532149 LIMD2Q9BT23 127 aa7.28□□□□□ -1.24
CHD7-211ENST00000532149 TP53AIP1Q9HCN2 124 aa7.28□□□□□ -1.24
CHD7-211ENST00000532149 A0A0G2JQZ4 141 aa7.27□□□□□ -1.25
CHD7-211ENST00000532149 CASC2Q6XLA1 102 aa7.27□□□□□ -1.25
CHD7-211ENST00000532149 TMEM254Q8TBM7 123 aa7.26□□□□□ -1.25
CHD7-211ENST00000532149 KRTAP29-1A8MX34 341 aaPredicted RBP7.25□□□□□ -1.25
CHD7-211ENST00000532149 RPS29P62273 56 aaKnown RBP7.25□□□□□ -1.25
CHD7-211ENST00000532149 SPAG11AQ6PDA7 123 aa7.25□□□□□ -1.25
CHD7-211ENST00000532149 Q96NJ1 140 aa7.25□□□□□ -1.25
CHD7-211ENST00000532149 A0A1B0GVX0 72 aa7.24□□□□□ -1.25
CHD7-211ENST00000532149 C8orf87E5RJ46 101 aa7.24□□□□□ -1.25
CHD7-211ENST00000532149 MP68P56378 58 aa7.24□□□□□ -1.25
CHD7-211ENST00000532149 RPS28P62857 69 aaKnown RBP7.24□□□□□ -1.25
CHD7-211ENST00000532149 SACSQ9NZJ4 4579 aa7.24□□□□□ -1.25
CHD7-211ENST00000532149 HYDINQ4G0P3 5121 aa7.23□□□□□ -1.25
CHD7-211ENST00000532149 SPINK1P00995 79 aa7.23□□□□□ -1.25
CHD7-211ENST00000532149 hDV103S1A0JD37 113 aa7.22□□□□□ -1.25
CHD7-211ENST00000532149 PLA2G1BP04054 148 aaKnown RBP7.22□□□□□ -1.25
CHD7-211ENST00000532149 DEFB116Q30KQ4 102 aa7.22□□□□□ -1.25
CHD7-211ENST00000532149 A0A0U1RQV1 116 aa7.21□□□□□ -1.26
CHD7-211ENST00000532149 ANAPC11Q9NYG5 84 aa7.21□□□□□ -1.26
CHD7-211ENST00000532149 KRTAP1-4P0C5Y4 121 aa7.2□□□□□ -1.26
CHD7-211ENST00000532149 HRCT1Q6UXD1 115 aa7.2□□□□□ -1.26
CHD7-211ENST00000532149 MMP24-AS1A0A0U1RRL7 71 aa7.19□□□□□ -1.26
CHD7-211ENST00000532149 C8orf17Q9NRJ1 99 aa7.19□□□□□ -1.26
CHD7-211ENST00000532149 H7BZZ5 65 aa7.18□□□□□ -1.26
CHD7-211ENST00000532149 WFDC13Q8IUB5 93 aa7.18□□□□□ -1.26
CHD7-211ENST00000532149 TYMSOSQ8TAI1 123 aa7.18□□□□□ -1.26
CHD7-211ENST00000532149 KRTAP13-2Q52LG2 175 aa7.17□□□□□ -1.26
CHD7-211ENST00000532149 A0A087X002 238 aa7.16□□□□□ -1.26
CHD7-211ENST00000532149 FAM236DA0A1B0GTK5 79 aa7.15□□□□□ -1.26
CHD7-211ENST00000532149 FAM236CP0DP71 79 aa7.15□□□□□ -1.26
CHD7-211ENST00000532149 MRPL34Q9BQ48 92 aaKnown RBP7.15□□□□□ -1.26
CHD7-211ENST00000532149 IGHV6-1A0A0B4J1U7 121 aa7.14□□□□□ -1.27
CHD7-211ENST00000532149 LRP1BQ9NZR2 4599 aa7.13□□□□□ -1.27
CHD7-211ENST00000532149 SNURFQ9Y675 71 aa7.13□□□□□ -1.27
CHD7-211ENST00000532149 VPS13BQ7Z7G8 4022 aa7.12□□□□□ -1.27
CHD7-211ENST00000532149 TRAV22A0A0B4J277 110 aa7.12□□□□□ -1.27
CHD7-211ENST00000532149 ZCCHC13Q8WW36 166 aaKnown RBP7.12□□□□□ -1.27
CHD7-211ENST00000532149 H0Y9P7 68 aa7.1□□□□□ -1.27
CHD7-211ENST00000532149 C1orf195Q5TG92 126 aa7.1□□□□□ -1.27
CHD7-211ENST00000532149 LINC00304Q8N9R0 145 aa7.1□□□□□ -1.27
CHD7-211ENST00000532149 SERP1Q9Y6X1 66 aa7.1□□□□□ -1.27
CHD7-211ENST00000532149 LINC00313P59037 77 aa7.09□□□□□ -1.27
CHD7-211ENST00000532149 CYSTM1Q9H1C7 97 aa7.09□□□□□ -1.27
CHD7-211ENST00000532149 SPANXA2-OT1Q8N9U9 137 aa7.08□□□□□ -1.28
CHD7-211ENST00000532149 DYNC1H1Q14204 4646 aaKnown RBP7.08□□□□□ -1.28
CHD7-211ENST00000532149 RYR2Q92736 4967 aa7.08□□□□□ -1.28
CHD7-211ENST00000532149 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
CHD7-211ENST00000532149 KRTAP10-4P60372 401 aaPredicted RBP7.05□□□□□ -1.28
CHD7-211ENST00000532149 C1orf64Q8NEQ6 169 aa7.05□□□□□ -1.28
CHD7-211ENST00000532149 LINC00208Q96KT6 92 aa7.05□□□□□ -1.28
CHD7-211ENST00000532149 NDUFS5O43920 106 aa7.04□□□□□ -1.28
CHD7-211ENST00000532149 Q8N9P0 234 aaPredicted RBP7.04□□□□□ -1.28
CHD7-211ENST00000532149 LOC101927531A0A1B0GV80 90 aa7.03□□□□□ -1.28
CHD7-211ENST00000532149 SMR3BP02814 79 aaPredicted RBP7.03□□□□□ -1.28
CHD7-211ENST00000532149 CYP4F30PQ9H0H9 118 aa7.03□□□□□ -1.28
CHD7-211ENST00000532149 PRR26Q8N8Z3 221 aa7.01□□□□□ -1.29
CHD7-211ENST00000532149 APOBP04114 4563 aaKnown RBP6.98□□□□□ -1.29
CHD7-211ENST00000532149 SMIM26A0A096LP01 95 aa6.96□□□□□ -1.3
CHD7-211ENST00000532149 KMT2CQ8NEZ4 4911 aaKnown RBP6.95□□□□□ -1.3
CHD7-211ENST00000532149 IGLV7-46A0A075B6I9 117 aa6.95□□□□□ -1.3
CHD7-211ENST00000532149 NOTCH2NLQ7Z3S9 236 aa6.94□□□□□ -1.3
CHD7-211ENST00000532149 KRTAP3-1Q9BYR8 98 aa6.94□□□□□ -1.3
CHD7-211ENST00000532149 Q5VSD8 79 aa6.92□□□□□ -1.3
CHD7-211ENST00000532149 KRTAP16-1A8MUX0 517 aa6.91□□□□□ -1.3
CHD7-211ENST00000532149 KRTAP13-3Q3SY46 172 aa6.91□□□□□ -1.3
CHD7-211ENST00000532149 FP248Q71RG6 208 aaPredicted RBP6.9□□□□□ -1.3
CHD7-211ENST00000532149 PKHD1L1Q86WI1 4243 aa6.9□□□□□ -1.31
CHD7-211ENST00000532149 KRTAP10-8P60410 259 aa6.88□□□□□ -1.31
CHD7-211ENST00000532149 V9GYY9 64 aa6.87□□□□□ -1.31
CHD7-211ENST00000532149 Q8N1X5 172 aa6.86□□□□□ -1.31
CHD7-211ENST00000532149 Q5W150 140 aa6.84□□□□□ -1.31
CHD7-211ENST00000532149 IGKV2-30P06310 120 aa6.83□□□□□ -1.32
CHD7-211ENST00000532149 C20orf166-AS1Q96NR2 134 aa6.83□□□□□ -1.32
CHD7-211ENST00000532149 FAT1Q14517 4588 aa6.82□□□□□ -1.32
CHD7-211ENST00000532149 A8MUU9 505 aa6.81□□□□□ -1.32
CHD7-211ENST00000532149 OXTP01178 125 aa6.81□□□□□ -1.32
CHD7-211ENST00000532149 ACYP2P14621 99 aa6.8□□□□□ -1.32
CHD7-211ENST00000532149 PCOTHQ58A44 107 aa6.8□□□□□ -1.32
CHD7-211ENST00000532149 C7orf65Q6ZTY9 151 aa6.78□□□□□ -1.32
CHD7-211ENST00000532149 Q1T7F1 81 aa6.77□□□□□ -1.33
CHD7-211ENST00000532149 Q75L30 129 aa6.77□□□□□ -1.33
CHD7-211ENST00000532149 RYR1P21817 5038 aa6.76□□□□□ -1.33
CHD7-211ENST00000532149 A8MUN3 132 aa6.75□□□□□ -1.33
CHD7-211ENST00000532149 RYR3Q15413 4870 aa6.75□□□□□ -1.33
CHD7-211ENST00000532149 HSPG2P98160 4391 aa6.74□□□□□ -1.33
CHD7-211ENST00000532149 PRR4Q16378 134 aa6.73□□□□□ -1.33
CHD7-211ENST00000532149 COA5Q86WW8 74 aa6.73□□□□□ -1.33
CHD7-211ENST00000532149 DMAC1Q96GE9 116 aa6.73□□□□□ -1.33
CHD7-211ENST00000532149 HRES1P13985 223 aa6.72□□□□□ -1.33
CHD7-211ENST00000532149 FLG2Q5D862 2391 aaPredicted RBP6.72□□□□□ -1.33
CHD7-211ENST00000532149 IGKV2D-30A0A075B6S6 120 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms