RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 KRTAP19-2Q3LHN2 52 aa9.56□□□□□ -0.88
PKP3-208ENST00000531857 CXCL6P80162 114 aa9.55□□□□□ -0.88
PKP3-208ENST00000531857 SSBP3-AS1Q7Z2R9 100 aa9.55□□□□□ -0.88
PKP3-208ENST00000531857 ST20-AS1Q8NBB2 130 aa9.54□□□□□ -0.88
PKP3-208ENST00000531857 MT1HP80294 61 aa9.52□□□□□ -0.89
PKP3-208ENST00000531857 SMIM29Q86T20 159 aa9.52□□□□□ -0.89
PKP3-208ENST00000531857 Q6ZVQ6 151 aa9.51□□□□□ -0.89
PKP3-208ENST00000531857 NREPQ16612 68 aa9.49□□□□□ -0.89
PKP3-208ENST00000531857 IGKV3D-7A0A0C4DH55 119 aa9.45□□□□□ -0.9
PKP3-208ENST00000531857 PCOTHQ58A44 107 aa9.45□□□□□ -0.9
PKP3-208ENST00000531857 C9orf153Q5TBE3 101 aa9.45□□□□□ -0.9
PKP3-208ENST00000531857 ANAPC13Q9BS18 74 aa9.45□□□□□ -0.9
PKP3-208ENST00000531857 ATOX1O00244 68 aa9.44□□□□□ -0.9
PKP3-208ENST00000531857 A0A1W2PNM2 257 aa9.43□□□□□ -0.9
PKP3-208ENST00000531857 HIST1H4AP62805 103 aaKnown RBP9.42□□□□□ -0.9
PKP3-208ENST00000531857 FAM236AA0A1B0GUQ0 79 aa9.41□□□□□ -0.9
PKP3-208ENST00000531857 FAM236BA0A1B0GV22 79 aa9.41□□□□□ -0.9
PKP3-208ENST00000531857 LORP23490 312 aaPredicted RBP9.41□□□□□ -0.9
PKP3-208ENST00000531857 IGFL1Q6UW32 110 aa9.41□□□□□ -0.9
PKP3-208ENST00000531857 C9orf92A6NGG3 77 aa9.39□□□□□ -0.91
PKP3-208ENST00000531857 BPY2O14599 106 aa9.39□□□□□ -0.91
PKP3-208ENST00000531857 KRTAP10-6P60371 365 aaPredicted RBP9.39□□□□□ -0.91
PKP3-208ENST00000531857 SMIM20Q8N5G0 67 aa9.39□□□□□ -0.91
PKP3-208ENST00000531857 HRCT1Q6UXD1 115 aa9.36□□□□□ -0.91
PKP3-208ENST00000531857 LIMD2Q9BT23 127 aa9.35□□□□□ -0.91
PKP3-208ENST00000531857 SS18L2Q9UHA2 77 aa9.33□□□□□ -0.92
PKP3-208ENST00000531857 J3KT08 172 aa9.31□□□□□ -0.92
PKP3-208ENST00000531857 UQCRQO14949 82 aa9.29□□□□□ -0.92
PKP3-208ENST00000531857 CD164Q04900 197 aa9.29□□□□□ -0.92
PKP3-208ENST00000531857 A0A087WSZ3 146 aa9.28□□□□□ -0.92
PKP3-208ENST00000531857 M0R2T5 61 aa9.28□□□□□ -0.92
PKP3-208ENST00000531857 SERP2Q8N6R1 65 aa9.28□□□□□ -0.92
PKP3-208ENST00000531857 A0A087WVE0 104 aa9.26□□□□□ -0.93
PKP3-208ENST00000531857 COX7CP15954 63 aa9.26□□□□□ -0.93
PKP3-208ENST00000531857 IGKV4-1P06312 121 aa9.24□□□□□ -0.93
PKP3-208ENST00000531857 FLGP20930 4061 aaPredicted RBP9.22□□□□□ -0.93
PKP3-208ENST00000531857 TRAV7A0A075B6U4 112 aa9.22□□□□□ -0.93
PKP3-208ENST00000531857 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.94
PKP3-208ENST00000531857 LINC00472Q9H8W2 130 aa9.2□□□□□ -0.94
PKP3-208ENST00000531857 NDUFB1O75438 58 aa9.19□□□□□ -0.94
PKP3-208ENST00000531857 DSCR10P59022 87 aa9.19□□□□□ -0.94
PKP3-208ENST00000531857 RPL37P61927 97 aaKnown RBP9.19□□□□□ -0.94
PKP3-208ENST00000531857 C1orf195Q5TG92 126 aa9.18□□□□□ -0.94
PKP3-208ENST00000531857 A8MWP4 228 aa9.17□□□□□ -0.94
PKP3-208ENST00000531857 A0A0G2JQZ4 141 aa9.16□□□□□ -0.94
PKP3-208ENST00000531857 Q5XG85 94 aa9.15□□□□□ -0.94
PKP3-208ENST00000531857 HCG22E2RYF7 251 aa9.13□□□□□ -0.95
PKP3-208ENST00000531857 CCDC179H3BU77 68 aa9.13□□□□□ -0.95
PKP3-208ENST00000531857 PRR15Q8IV56 129 aa9.13□□□□□ -0.95
PKP3-208ENST00000531857 K7EQZ3 153 aa9.11□□□□□ -0.95
PKP3-208ENST00000531857 Q8N9L7 120 aa9.1□□□□□ -0.95
PKP3-208ENST00000531857 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.08□□□□□ -0.96
PKP3-208ENST00000531857 KRTAP9-7A8MTY7 169 aa9.07□□□□□ -0.96
PKP3-208ENST00000531857 NDUFC1O43677 76 aa9.06□□□□□ -0.96
PKP3-208ENST00000531857 OCR1Q9BZK8 76 aa9.06□□□□□ -0.96
PKP3-208ENST00000531857 Q96NJ1 140 aa9.04□□□□□ -0.96
PKP3-208ENST00000531857 KLKP1Q107X0 134 aa9.03□□□□□ -0.96
PKP3-208ENST00000531857 C5orf47Q569G3 176 aa9.03□□□□□ -0.96
PKP3-208ENST00000531857 DEFB116Q30KQ4 102 aa9.02□□□□□ -0.97
PKP3-208ENST00000531857 CASC2Q6XLA1 102 aa9.02□□□□□ -0.97
PKP3-208ENST00000531857 A0A1B0GVX0 72 aa9.01□□□□□ -0.97
PKP3-208ENST00000531857 C8orf87E5RJ46 101 aa9□□□□□ -0.97
PKP3-208ENST00000531857 TMEM258P61165 79 aa8.99□□□□□ -0.97
PKP3-208ENST00000531857 TP53AIP1Q9HCN2 124 aa8.99□□□□□ -0.97
PKP3-208ENST00000531857 H3BPC8 53 aa8.98□□□□□ -0.97
PKP3-208ENST00000531857 C20orf197Q8N268 126 aa8.98□□□□□ -0.97
PKP3-208ENST00000531857 hDV103S1A0JD37 113 aa8.97□□□□□ -0.97
PKP3-208ENST00000531857 TMEM254Q8TBM7 123 aa8.96□□□□□ -0.98
PKP3-208ENST00000531857 MMP24-AS1A0A0U1RRL7 71 aa8.95□□□□□ -0.98
PKP3-208ENST00000531857 KRTAP9-8Q9BYQ0 159 aa8.95□□□□□ -0.98
PKP3-208ENST00000531857 C8orf17Q9NRJ1 99 aa8.95□□□□□ -0.98
PKP3-208ENST00000531857 SSPOA2VEC9 5147 aa8.94□□□□□ -0.98
PKP3-208ENST00000531857 USH2AO75445 5202 aa8.94□□□□□ -0.98
PKP3-208ENST00000531857 MP68P56378 58 aa8.94□□□□□ -0.98
PKP3-208ENST00000531857 WFDC13Q8IUB5 93 aa8.94□□□□□ -0.98
PKP3-208ENST00000531857 ATP11AUNQ6ZP68 121 aa8.93□□□□□ -0.98
PKP3-208ENST00000531857 ATP5EP56381 51 aaPredicted RBP8.91□□□□□ -0.98
PKP3-208ENST00000531857 Q75L30 129 aa8.91□□□□□ -0.98
PKP3-208ENST00000531857 IGHV6-1A0A0B4J1U7 121 aa8.9□□□□□ -0.98
PKP3-208ENST00000531857 MRPL34Q9BQ48 92 aaKnown RBP8.89□□□□□ -0.99
PKP3-208ENST00000531857 H7BZZ5 65 aa8.85□□□□□ -0.99
PKP3-208ENST00000531857 LINC00313P59037 77 aa8.84□□□□□ -0.99
PKP3-208ENST00000531857 RPS28P62857 69 aaKnown RBP8.83□□□□□ -1
PKP3-208ENST00000531857 SNURFQ9Y675 71 aa8.83□□□□□ -1
PKP3-208ENST00000531857 TRAV22A0A0B4J277 110 aa8.82□□□□□ -1
PKP3-208ENST00000531857 ZCCHC13Q8WW36 166 aaKnown RBP8.81□□□□□ -1
PKP3-208ENST00000531857 FCGBPQ9Y6R7 5405 aaPredicted RBP8.8□□□□□ -1
PKP3-208ENST00000531857 H0Y9P7 68 aa8.8□□□□□ -1
PKP3-208ENST00000531857 FAM236DA0A1B0GTK5 79 aa8.79□□□□□ -1
PKP3-208ENST00000531857 FAM236CP0DP71 79 aa8.79□□□□□ -1
PKP3-208ENST00000531857 MT2AP02795 61 aa8.78□□□□□ -1
PKP3-208ENST00000531857 CYSTM1Q9H1C7 97 aa8.77□□□□□ -1.01
PKP3-208ENST00000531857 NDUFS5O43920 106 aa8.76□□□□□ -1.01
PKP3-208ENST00000531857 KRTAP19-1Q8IUB9 90 aa8.76□□□□□ -1.01
PKP3-208ENST00000531857 C20orf166-AS1Q96NR2 134 aa8.76□□□□□ -1.01
PKP3-208ENST00000531857 LCE2BO14633 110 aa8.75□□□□□ -1.01
PKP3-208ENST00000531857 Q8N9P0 234 aaPredicted RBP8.74□□□□□ -1.01
PKP3-208ENST00000531857 LINC00208Q96KT6 92 aa8.74□□□□□ -1.01
PKP3-208ENST00000531857 A8MUU9 505 aa8.73□□□□□ -1.01
PKP3-208ENST00000531857 C1orf64Q8NEQ6 169 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms