RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 SEC61GP60059 68 aa6.06□□□□□ -1.44
SOX6-213ENST00000530378 KRTAP9-9Q9BYP9 154 aa6.06□□□□□ -1.44
SOX6-213ENST00000530378 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
SOX6-213ENST00000530378 C1orf195Q5TG92 126 aa6.03□□□□□ -1.44
SOX6-213ENST00000530378 Q96NJ1 140 aa6.03□□□□□ -1.44
SOX6-213ENST00000530378 RPS29P62273 56 aaKnown RBP6.02□□□□□ -1.45
SOX6-213ENST00000530378 NREPQ16612 68 aa6.02□□□□□ -1.45
SOX6-213ENST00000530378 Q6ZVQ6 151 aa6.02□□□□□ -1.45
SOX6-213ENST00000530378 Q5XG85 94 aa6.01□□□□□ -1.45
SOX6-213ENST00000530378 ANAPC13Q9BS18 74 aa6□□□□□ -1.45
SOX6-213ENST00000530378 UBL5Q9BZL1 73 aa6□□□□□ -1.45
SOX6-213ENST00000530378 LINC00472Q9H8W2 130 aa6□□□□□ -1.45
SOX6-213ENST00000530378 FAM240AA0A1B0GVK7 77 aa5.99□□□□□ -1.45
SOX6-213ENST00000530378 A0A1B0GW54 56 aa5.99□□□□□ -1.45
SOX6-213ENST00000530378 IGKV4-1P06312 121 aa5.99□□□□□ -1.45
SOX6-213ENST00000530378 ACYP1P07311 99 aa5.99□□□□□ -1.45
SOX6-213ENST00000530378 PRR4Q16378 134 aa5.99□□□□□ -1.45
SOX6-213ENST00000530378 ASB16-AS1Q495Z4 193 aa5.98□□□□□ -1.45
SOX6-213ENST00000530378 HMCN2Q8NDA2 5059 aa5.98□□□□□ -1.45
SOX6-213ENST00000530378 LPAP08519 4548 aa5.97□□□□□ -1.45
SOX6-213ENST00000530378 Q8N9L7 120 aa5.97□□□□□ -1.45
SOX6-213ENST00000530378 IGKV3D-7A0A0C4DH55 119 aa5.96□□□□□ -1.46
SOX6-213ENST00000530378 BPY2O14599 106 aa5.96□□□□□ -1.46
SOX6-213ENST00000530378 CDIP1Q9H305 208 aa5.95□□□□□ -1.46
SOX6-213ENST00000530378 IGLV7-46A0A075B6I9 117 aa5.94□□□□□ -1.46
SOX6-213ENST00000530378 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
SOX6-213ENST00000530378 C9orf92A6NGG3 77 aa5.94□□□□□ -1.46
SOX6-213ENST00000530378 IGHV6-1A0A0B4J1U7 121 aa5.93□□□□□ -1.46
SOX6-213ENST00000530378 DSCR10P59022 87 aa5.93□□□□□ -1.46
SOX6-213ENST00000530378 K7EQZ3 153 aa5.92□□□□□ -1.46
SOX6-213ENST00000530378 J3KT08 172 aa5.91□□□□□ -1.46
SOX6-213ENST00000530378 RPS28P62857 69 aaKnown RBP5.91□□□□□ -1.46
SOX6-213ENST00000530378 V9GYY9 64 aa5.91□□□□□ -1.46
SOX6-213ENST00000530378 A8MWP4 228 aa5.9□□□□□ -1.46
SOX6-213ENST00000530378 FP248Q71RG6 208 aaPredicted RBP5.9□□□□□ -1.46
SOX6-213ENST00000530378 NOTCH2NLQ7Z3S9 236 aa5.9□□□□□ -1.46
SOX6-213ENST00000530378 A0A1B0GVX0 72 aa5.9□□□□□ -1.47
SOX6-213ENST00000530378 LINC00643Q86TS7 51 aa5.9□□□□□ -1.47
SOX6-213ENST00000530378 LRP2P98164 4655 aa5.89□□□□□ -1.47
SOX6-213ENST00000530378 NDUFB1O75438 58 aa5.88□□□□□ -1.47
SOX6-213ENST00000530378 HIST1H4AP62805 103 aaKnown RBP5.88□□□□□ -1.47
SOX6-213ENST00000530378 CXCL6P80162 114 aa5.88□□□□□ -1.47
SOX6-213ENST00000530378 PRR15Q8IV56 129 aa5.88□□□□□ -1.47
SOX6-213ENST00000530378 CCDC179H3BU77 68 aa5.87□□□□□ -1.47
SOX6-213ENST00000530378 MT-ATP8P03928 68 aa5.87□□□□□ -1.47
SOX6-213ENST00000530378 PRO0628Q9UI54 55 aa5.87□□□□□ -1.47
SOX6-213ENST00000530378 KRTAP13-3Q3SY46 172 aa5.86□□□□□ -1.47
SOX6-213ENST00000530378 ATP5EP2Q5VTU8 51 aa5.86□□□□□ -1.47
SOX6-213ENST00000530378 A0A087WVE0 104 aa5.85□□□□□ -1.47
SOX6-213ENST00000530378 WFDC13Q8IUB5 93 aa5.85□□□□□ -1.47
SOX6-213ENST00000530378 C8orf17Q9NRJ1 99 aa5.85□□□□□ -1.47
SOX6-213ENST00000530378 LINC00313P59037 77 aa5.84□□□□□ -1.47
SOX6-213ENST00000530378 MMP24-AS1A0A0U1RRL7 71 aa5.83□□□□□ -1.48
SOX6-213ENST00000530378 TPRXLQ17RH7 258 aa5.82□□□□□ -1.48
SOX6-213ENST00000530378 RNF213Q63HN8 5207 aa5.82□□□□□ -1.48
SOX6-213ENST00000530378 C8orf87E5RJ46 101 aa5.81□□□□□ -1.48
SOX6-213ENST00000530378 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
SOX6-213ENST00000530378 HCG22E2RYF7 251 aa5.8□□□□□ -1.48
SOX6-213ENST00000530378 hDV103S1A0JD37 113 aa5.79□□□□□ -1.48
SOX6-213ENST00000530378 CASC2Q6XLA1 102 aa5.79□□□□□ -1.48
SOX6-213ENST00000530378 NDUFS5O43920 106 aa5.76□□□□□ -1.49
SOX6-213ENST00000530378 C4orf26Q17RF5 130 aa5.76□□□□□ -1.49
SOX6-213ENST00000530378 TMEM254Q8TBM7 123 aa5.76□□□□□ -1.49
SOX6-213ENST00000530378 MRPL34Q9BQ48 92 aaKnown RBP5.76□□□□□ -1.49
SOX6-213ENST00000530378 LCE1DQ5T752 114 aa5.75□□□□□ -1.49
SOX6-213ENST00000530378 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
SOX6-213ENST00000530378 FAM236AA0A1B0GUQ0 79 aa5.71□□□□□ -1.49
SOX6-213ENST00000530378 FAM236BA0A1B0GV22 79 aa5.71□□□□□ -1.49
SOX6-213ENST00000530378 A8MUU9 505 aa5.71□□□□□ -1.49
SOX6-213ENST00000530378 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.49
SOX6-213ENST00000530378 C20orf166-AS1Q96NR2 134 aa5.71□□□□□ -1.49
SOX6-213ENST00000530378 IMUPQ9GZP8 106 aa5.71□□□□□ -1.5
SOX6-213ENST00000530378 MUC17Q685J3 4493 aa5.7□□□□□ -1.5
SOX6-213ENST00000530378 Q75L30 129 aa5.7□□□□□ -1.5
SOX6-213ENST00000530378 Q8N9P0 234 aaPredicted RBP5.7□□□□□ -1.5
SOX6-213ENST00000530378 PCOTHQ58A44 107 aa5.69□□□□□ -1.5
SOX6-213ENST00000530378 UQCRQO14949 82 aa5.68□□□□□ -1.5
SOX6-213ENST00000530378 ATP11AUNQ6ZP68 121 aa5.67□□□□□ -1.5
SOX6-213ENST00000530378 TMEM258P61165 79 aa5.65□□□□□ -1.5
SOX6-213ENST00000530378 Q5W150 140 aa5.65□□□□□ -1.5
SOX6-213ENST00000530378 FAM236DA0A1B0GTK5 79 aa5.64□□□□□ -1.51
SOX6-213ENST00000530378 FAM236CP0DP71 79 aa5.64□□□□□ -1.51
SOX6-213ENST00000530378 ZCCHC13Q8WW36 166 aaKnown RBP5.64□□□□□ -1.51
SOX6-213ENST00000530378 SEC61BP60468 96 aaKnown RBP5.63□□□□□ -1.51
SOX6-213ENST00000530378 MUC2Q02817 5179 aa5.62□□□□□ -1.51
SOX6-213ENST00000530378 OCR1Q9BZK8 76 aa5.62□□□□□ -1.51
SOX6-213ENST00000530378 TP53AIP1Q9HCN2 124 aa5.6□□□□□ -1.51
SOX6-213ENST00000530378 KRTAP4-1Q9BYQ7 146 aa5.6□□□□□ -1.51
SOX6-213ENST00000530378 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
SOX6-213ENST00000530378 IGKV2D-30A0A075B6S6 120 aa5.58□□□□□ -1.52
SOX6-213ENST00000530378 H0Y9P7 68 aa5.58□□□□□ -1.52
SOX6-213ENST00000530378 ATOX1O00244 68 aa5.58□□□□□ -1.52
SOX6-213ENST00000530378 IGKV2-30P06310 120 aa5.58□□□□□ -1.52
SOX6-213ENST00000530378 TRAV22A0A0B4J277 110 aa5.58□□□□□ -1.52
SOX6-213ENST00000530378 LCE4AQ5TA78 99 aa5.58□□□□□ -1.52
SOX6-213ENST00000530378 COX7CP15954 63 aa5.57□□□□□ -1.52
SOX6-213ENST00000530378 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
SOX6-213ENST00000530378 TRAV7A0A075B6U4 112 aa5.54□□□□□ -1.52
SOX6-213ENST00000530378 SPINK7P58062 85 aa5.53□□□□□ -1.52
SOX6-213ENST00000530378 LINC00208Q96KT6 92 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 210.6 ms