RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 ANKRD29Q8N6D5 301 aa4.84□□□□□ -1.63
SF3B2-204ENST00000525207 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
SF3B2-204ENST00000525207 TMEM256-PLSCR3K7ERE1 68 aa4.83□□□□□ -1.64
SF3B2-204ENST00000525207 IGKV4-1P06312 121 aa4.83□□□□□ -1.64
SF3B2-204ENST00000525207 TRACP01848 142 aa4.82□□□□□ -1.64
SF3B2-204ENST00000525207 CCKP06307 115 aa4.82□□□□□ -1.64
SF3B2-204ENST00000525207 UBE2V1Q13404 147 aa4.82□□□□□ -1.64
SF3B2-204ENST00000525207 KRTAP3-1Q9BYR8 98 aa4.82□□□□□ -1.64
SF3B2-204ENST00000525207 LINC00313P59037 77 aa4.81□□□□□ -1.64
SF3B2-204ENST00000525207 LINC00472Q9H8W2 130 aa4.81□□□□□ -1.64
SF3B2-204ENST00000525207 TRBV20-1A0A075B6N2 111 aa4.8□□□□□ -1.64
SF3B2-204ENST00000525207 NOTCH2NLQ7Z3S9 236 aa4.8□□□□□ -1.64
SF3B2-204ENST00000525207 DEFB116Q30KQ4 102 aa4.79□□□□□ -1.64
SF3B2-204ENST00000525207 IGHV6-1A0A0B4J1U7 121 aa4.77□□□□□ -1.65
SF3B2-204ENST00000525207 VPS25Q9BRG1 176 aa4.77□□□□□ -1.65
SF3B2-204ENST00000525207 RBM3P98179 157 aaKnown RBP4.76□□□□□ -1.65
SF3B2-204ENST00000525207 MPLKIPQ8TAP9 179 aa4.76□□□□□ -1.65
SF3B2-204ENST00000525207 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
SF3B2-204ENST00000525207 A0A1B0GVX0 72 aa4.75□□□□□ -1.65
SF3B2-204ENST00000525207 C8orf87E5RJ46 101 aa4.75□□□□□ -1.65
SF3B2-204ENST00000525207 TSTD3H0UI37 97 aa4.75□□□□□ -1.65
SF3B2-204ENST00000525207 SCGB1C2P0DMR2 95 aa4.75□□□□□ -1.65
SF3B2-204ENST00000525207 HRES1P13985 223 aa4.75□□□□□ -1.65
SF3B2-204ENST00000525207 DSCR8Q96T75 97 aa4.75□□□□□ -1.65
SF3B2-204ENST00000525207 NAA38Q9BRA0 125 aaKnown RBP4.75□□□□□ -1.65
SF3B2-204ENST00000525207 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
SF3B2-204ENST00000525207 FAM236DA0A1B0GTK5 79 aa4.74□□□□□ -1.65
SF3B2-204ENST00000525207 FAM236CP0DP71 79 aa4.74□□□□□ -1.65
SF3B2-204ENST00000525207 BATFQ16520 125 aa4.74□□□□□ -1.65
SF3B2-204ENST00000525207 C9JAW5 83 aa4.72□□□□□ -1.65
SF3B2-204ENST00000525207 M0R143 59 aa4.72□□□□□ -1.65
SF3B2-204ENST00000525207 BAALC-AS2P0C853 105 aa4.72□□□□□ -1.65
SF3B2-204ENST00000525207 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
SF3B2-204ENST00000525207 RBM12B-AS1Q9P1G2 102 aa4.72□□□□□ -1.65
SF3B2-204ENST00000525207 J3KT08 172 aa4.71□□□□□ -1.66
SF3B2-204ENST00000525207 Q6ZQT0 140 aa4.7□□□□□ -1.66
SF3B2-204ENST00000525207 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
SF3B2-204ENST00000525207 MT2AP02795 61 aa4.69□□□□□ -1.66
SF3B2-204ENST00000525207 ATXN8Q156A1 80 aa4.69□□□□□ -1.66
SF3B2-204ENST00000525207 ZCCHC13Q8WW36 166 aaKnown RBP4.69□□□□□ -1.66
SF3B2-204ENST00000525207 LOC110117498A0A087WWA1 95 aa4.68□□□□□ -1.66
SF3B2-204ENST00000525207 JMJD7-PLA2G4BH0Y9G9 81 aa4.68□□□□□ -1.66
SF3B2-204ENST00000525207 A0A1B0GW54 56 aa4.67□□□□□ -1.66
SF3B2-204ENST00000525207 MT1FP04733 61 aa4.67□□□□□ -1.66
SF3B2-204ENST00000525207 Q8N9P0 234 aaPredicted RBP4.67□□□□□ -1.66
SF3B2-204ENST00000525207 A8MWP4 228 aa4.66□□□□□ -1.66
SF3B2-204ENST00000525207 NDUFB1O75438 58 aa4.66□□□□□ -1.66
SF3B2-204ENST00000525207 C8orf17Q9NRJ1 99 aa4.66□□□□□ -1.66
SF3B2-204ENST00000525207 PCP4L1A6NKN8 68 aa4.65□□□□□ -1.67
SF3B2-204ENST00000525207 TAX1BP3O14907 124 aa4.65□□□□□ -1.67
SF3B2-204ENST00000525207 PDE6GP18545 87 aa4.65□□□□□ -1.67
SF3B2-204ENST00000525207 LYRM7Q5U5X0 104 aa4.65□□□□□ -1.67
SF3B2-204ENST00000525207 KRTAP4-2Q9BYR5 136 aa4.65□□□□□ -1.67
SF3B2-204ENST00000525207 C14orf132Q9NPU4 83 aa4.65□□□□□ -1.67
SF3B2-204ENST00000525207 USH2AO75445 5202 aa4.64□□□□□ -1.67
SF3B2-204ENST00000525207 IGKV3D-7A0A0C4DH55 119 aa4.64□□□□□ -1.67
SF3B2-204ENST00000525207 SPINK7P58062 85 aa4.64□□□□□ -1.67
SF3B2-204ENST00000525207 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
SF3B2-204ENST00000525207 MTURNQ8N3F0 131 aa4.64□□□□□ -1.67
SF3B2-204ENST00000525207 WFDC13Q8IUB5 93 aa4.62□□□□□ -1.67
SF3B2-204ENST00000525207 Q6ZVQ6 151 aa4.61□□□□□ -1.67
SF3B2-204ENST00000525207 PRR15Q8IV56 129 aa4.61□□□□□ -1.67
SF3B2-204ENST00000525207 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
SF3B2-204ENST00000525207 MMP24-AS1A0A0U1RRL7 71 aa4.6□□□□□ -1.67
SF3B2-204ENST00000525207 A0A1W2PPM0 123 aa4.6□□□□□ -1.67
SF3B2-204ENST00000525207 KRTAP10-10P60014 251 aa4.6□□□□□ -1.67
SF3B2-204ENST00000525207 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
SF3B2-204ENST00000525207 H3BT86 120 aa4.58□□□□□ -1.68
SF3B2-204ENST00000525207 NREPQ16612 68 aa4.58□□□□□ -1.68
SF3B2-204ENST00000525207 TMEM254Q8TBM7 123 aa4.58□□□□□ -1.68
SF3B2-204ENST00000525207 K7EQZ3 153 aa4.57□□□□□ -1.68
SF3B2-204ENST00000525207 COL5A1-AS1Q5SY13 56 aa4.57□□□□□ -1.68
SF3B2-204ENST00000525207 MRPL34Q9BQ48 92 aaKnown RBP4.57□□□□□ -1.68
SF3B2-204ENST00000525207 SPCS1Q9Y6A9 102 aa4.55□□□□□ -1.68
SF3B2-204ENST00000525207 hDV103S1A0JD37 113 aa4.54□□□□□ -1.68
SF3B2-204ENST00000525207 FCGBPQ9Y6R7 5405 aaPredicted RBP4.53□□□□□ -1.68
SF3B2-204ENST00000525207 NDUFS5O43920 106 aa4.52□□□□□ -1.69
SF3B2-204ENST00000525207 BPY2O14599 106 aa4.51□□□□□ -1.69
SF3B2-204ENST00000525207 K7EP34 96 aa4.5□□□□□ -1.69
SF3B2-204ENST00000525207 H1FX-AS1Q4G0G2 97 aa4.49□□□□□ -1.69
SF3B2-204ENST00000525207 C7orf65Q6ZTY9 151 aa4.49□□□□□ -1.69
SF3B2-204ENST00000525207 IGKV2D-30A0A075B6S6 120 aa4.48□□□□□ -1.69
SF3B2-204ENST00000525207 IGKV2-30P06310 120 aa4.48□□□□□ -1.69
SF3B2-204ENST00000525207 Q8N9L7 120 aa4.48□□□□□ -1.69
SF3B2-204ENST00000525207 PRO0461Q9UI25 63 aa4.48□□□□□ -1.69
SF3B2-204ENST00000525207 Q5W150 140 aa4.47□□□□□ -1.69
SF3B2-204ENST00000525207 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.7
SF3B2-204ENST00000525207 CASC2Q6XLA1 102 aa4.46□□□□□ -1.7
SF3B2-204ENST00000525207 HCG22E2RYF7 251 aa4.45□□□□□ -1.7
SF3B2-204ENST00000525207 MACF1Q9UPN3 7388 aaKnown RBP4.43□□□□□ -1.7
SF3B2-204ENST00000525207 GTF2H5Q6ZYL4 71 aa4.43□□□□□ -1.7
SF3B2-204ENST00000525207 CXCL6P80162 114 aa4.42□□□□□ -1.7
SF3B2-204ENST00000525207 LINC00846Q9NV44 126 aa4.42□□□□□ -1.7
SF3B2-204ENST00000525207 UBL5Q9BZL1 73 aa4.41□□□□□ -1.7
SF3B2-204ENST00000525207 C4orf26Q17RF5 130 aa4.4□□□□□ -1.71
SF3B2-204ENST00000525207 A0A1B0GV90 55 aa4.39□□□□□ -1.71
SF3B2-204ENST00000525207 F8W1H4 67 aa4.39□□□□□ -1.71
SF3B2-204ENST00000525207 ETDBQ3ZM63 59 aa4.39□□□□□ -1.71
SF3B2-204ENST00000525207 KRTAP15-1Q3LI76 137 aa4.38□□□□□ -1.71
SF3B2-204ENST00000525207 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms