RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
CTNNA1-240ENST00000523912 JMJD7-PLA2G4BH0Y9G9 81 aa4.57□□□□□ -1.68
CTNNA1-240ENST00000523912 IGKV4-1P06312 121 aa4.57□□□□□ -1.68
CTNNA1-240ENST00000523912 LINC00313P59037 77 aa4.57□□□□□ -1.68
CTNNA1-240ENST00000523912 RBM3P98179 157 aaKnown RBP4.57□□□□□ -1.68
CTNNA1-240ENST00000523912 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-240ENST00000523912 MTURNQ8N3F0 131 aa4.56□□□□□ -1.68
CTNNA1-240ENST00000523912 DSCR8Q96T75 97 aa4.56□□□□□ -1.68
CTNNA1-240ENST00000523912 FAM236DA0A1B0GTK5 79 aa4.55□□□□□ -1.68
CTNNA1-240ENST00000523912 CCKP06307 115 aa4.55□□□□□ -1.68
CTNNA1-240ENST00000523912 FAM236CP0DP71 79 aa4.55□□□□□ -1.68
CTNNA1-240ENST00000523912 GTF2H5Q6ZYL4 71 aa4.55□□□□□ -1.68
CTNNA1-240ENST00000523912 LOC110117498A0A087WWA1 95 aa4.53□□□□□ -1.68
CTNNA1-240ENST00000523912 C21orf62-AS1Q17RA5 79 aa4.53□□□□□ -1.68
CTNNA1-240ENST00000523912 RBM12B-AS1Q9P1G2 102 aa4.53□□□□□ -1.68
CTNNA1-240ENST00000523912 IGHV6-1A0A0B4J1U7 121 aa4.52□□□□□ -1.69
CTNNA1-240ENST00000523912 PDE6GP18545 87 aa4.52□□□□□ -1.69
CTNNA1-240ENST00000523912 Q6ZQT0 140 aa4.52□□□□□ -1.69
CTNNA1-240ENST00000523912 VPS25Q9BRG1 176 aa4.52□□□□□ -1.69
CTNNA1-240ENST00000523912 C14orf132Q9NPU4 83 aa4.52□□□□□ -1.69
CTNNA1-240ENST00000523912 PRO0461Q9UI25 63 aa4.52□□□□□ -1.69
CTNNA1-240ENST00000523912 C8orf87E5RJ46 101 aa4.51□□□□□ -1.69
CTNNA1-240ENST00000523912 LINC00472Q9H8W2 130 aa4.51□□□□□ -1.69
CTNNA1-240ENST00000523912 KRTAP16-1A8MUX0 517 aa4.5□□□□□ -1.69
CTNNA1-240ENST00000523912 SMCPP49901 116 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-240ENST00000523912 A0A1B0GW54 56 aa4.49□□□□□ -1.69
CTNNA1-240ENST00000523912 J3KT08 172 aa4.49□□□□□ -1.69
CTNNA1-240ENST00000523912 DEFB116Q30KQ4 102 aa4.49□□□□□ -1.69
CTNNA1-240ENST00000523912 A0A1B0GVX0 72 aa4.48□□□□□ -1.69
CTNNA1-240ENST00000523912 F8W1H4 67 aa4.48□□□□□ -1.69
CTNNA1-240ENST00000523912 NOTCH2NLQ7Z3S9 236 aa4.47□□□□□ -1.69
CTNNA1-240ENST00000523912 NDUFB1O75438 58 aa4.46□□□□□ -1.7
CTNNA1-240ENST00000523912 KRTAP9-8Q9BYQ0 159 aa4.46□□□□□ -1.7
CTNNA1-240ENST00000523912 A0A1B0GV90 55 aa4.45□□□□□ -1.7
CTNNA1-240ENST00000523912 HRES1P13985 223 aa4.44□□□□□ -1.7
CTNNA1-240ENST00000523912 ZCCHC13Q8WW36 166 aaKnown RBP4.44□□□□□ -1.7
CTNNA1-240ENST00000523912 ETDBQ3ZM63 59 aa4.43□□□□□ -1.7
CTNNA1-240ENST00000523912 MPLKIPQ8TAP9 179 aa4.43□□□□□ -1.7
CTNNA1-240ENST00000523912 USH2AO75445 5202 aa4.42□□□□□ -1.7
CTNNA1-240ENST00000523912 SSPOA2VEC9 5147 aa4.4□□□□□ -1.7
CTNNA1-240ENST00000523912 A8MWP4 228 aa4.4□□□□□ -1.71
CTNNA1-240ENST00000523912 MT2AP02795 61 aa4.4□□□□□ -1.71
CTNNA1-240ENST00000523912 SPINK7P58062 85 aa4.4□□□□□ -1.71
CTNNA1-240ENST00000523912 NREPQ16612 68 aa4.4□□□□□ -1.71
CTNNA1-240ENST00000523912 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
CTNNA1-240ENST00000523912 Q6ZVQ6 151 aa4.38□□□□□ -1.71
CTNNA1-240ENST00000523912 Q8N9P0 234 aaPredicted RBP4.38□□□□□ -1.71
CTNNA1-240ENST00000523912 C8orf17Q9NRJ1 99 aa4.38□□□□□ -1.71
CTNNA1-240ENST00000523912 UBL5Q9BZL1 73 aa4.37□□□□□ -1.71
CTNNA1-240ENST00000523912 LINC00846Q9NV44 126 aa4.37□□□□□ -1.71
CTNNA1-240ENST00000523912 FAM240AA0A1B0GVK7 77 aa4.36□□□□□ -1.71
CTNNA1-240ENST00000523912 BPY2O14599 106 aa4.36□□□□□ -1.71
CTNNA1-240ENST00000523912 MT1FP04733 61 aa4.36□□□□□ -1.71
CTNNA1-240ENST00000523912 WFDC13Q8IUB5 93 aa4.36□□□□□ -1.71
CTNNA1-240ENST00000523912 KRTAP19-1Q8IUB9 90 aa4.36□□□□□ -1.71
CTNNA1-240ENST00000523912 IGKV3D-7A0A0C4DH55 119 aa4.35□□□□□ -1.71
CTNNA1-240ENST00000523912 FCGBPQ9Y6R7 5405 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-240ENST00000523912 ACYP1P07311 99 aa4.34□□□□□ -1.71
CTNNA1-240ENST00000523912 PRR15Q8IV56 129 aa4.34□□□□□ -1.71
CTNNA1-240ENST00000523912 LCE2BO14633 110 aa4.33□□□□□ -1.72
CTNNA1-240ENST00000523912 KRTAP9-3Q9BYQ3 159 aa4.33□□□□□ -1.72
CTNNA1-240ENST00000523912 K7EQZ3 153 aa4.32□□□□□ -1.72
CTNNA1-240ENST00000523912 TMEM254Q8TBM7 123 aa4.32□□□□□ -1.72
CTNNA1-240ENST00000523912 NDUFS5O43920 106 aa4.31□□□□□ -1.72
CTNNA1-240ENST00000523912 MRPL34Q9BQ48 92 aaKnown RBP4.31□□□□□ -1.72
CTNNA1-240ENST00000523912 MMP24-AS1A0A0U1RRL7 71 aa4.3□□□□□ -1.72
CTNNA1-240ENST00000523912 hDV103S1A0JD37 113 aa4.3□□□□□ -1.72
CTNNA1-240ENST00000523912 CXCL6P80162 114 aa4.3□□□□□ -1.72
CTNNA1-240ENST00000523912 ATP5EP2Q5VTU8 51 aa4.3□□□□□ -1.72
CTNNA1-240ENST00000523912 J3QR89 54 aa4.29□□□□□ -1.72
CTNNA1-240ENST00000523912 KRTAP19-6Q3LI70 58 aa4.28□□□□□ -1.72
CTNNA1-240ENST00000523912 Q8N9L7 120 aa4.28□□□□□ -1.72
CTNNA1-240ENST00000523912 SYNE2Q8WXH0 6885 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-240ENST00000523912 MACF1Q9UPN3 7388 aaKnown RBP4.27□□□□□ -1.73
CTNNA1-240ENST00000523912 H1FX-AS1Q4G0G2 97 aa4.26□□□□□ -1.73
CTNNA1-240ENST00000523912 C7orf65Q6ZTY9 151 aa4.26□□□□□ -1.73
CTNNA1-240ENST00000523912 IGKV2D-30A0A075B6S6 120 aa4.25□□□□□ -1.73
CTNNA1-240ENST00000523912 HCG22E2RYF7 251 aa4.25□□□□□ -1.73
CTNNA1-240ENST00000523912 IGKV2-30P06310 120 aa4.25□□□□□ -1.73
CTNNA1-240ENST00000523912 CASC2Q6XLA1 102 aa4.24□□□□□ -1.73
CTNNA1-240ENST00000523912 LINC00643Q86TS7 51 aa4.24□□□□□ -1.73
CTNNA1-240ENST00000523912 SVIPQ8NHG7 77 aa4.24□□□□□ -1.73
CTNNA1-240ENST00000523912 KRTAP6-3Q3LI67 103 aa4.23□□□□□ -1.73
CTNNA1-240ENST00000523912 K7ERU9 68 aa4.22□□□□□ -1.73
CTNNA1-240ENST00000523912 HIST1H4AP62805 103 aaKnown RBP4.19□□□□□ -1.74
CTNNA1-240ENST00000523912 Q5W150 140 aa4.17□□□□□ -1.74
CTNNA1-240ENST00000523912 A0A087WVE0 104 aa4.15□□□□□ -1.75
CTNNA1-240ENST00000523912 C4orf26Q17RF5 130 aa4.15□□□□□ -1.75
CTNNA1-240ENST00000523912 TP53AIP1Q9HCN2 124 aa4.15□□□□□ -1.75
CTNNA1-240ENST00000523912 FAM236AA0A1B0GUQ0 79 aa4.13□□□□□ -1.75
CTNNA1-240ENST00000523912 FAM236BA0A1B0GV22 79 aa4.13□□□□□ -1.75
CTNNA1-240ENST00000523912 C5orf47Q569G3 176 aa4.11□□□□□ -1.75
CTNNA1-240ENST00000523912 IMUPQ9GZP8 106 aa4.11□□□□□ -1.75
CTNNA1-240ENST00000523912 S4R3F8 94 aa4.11□□□□□ -1.75
CTNNA1-240ENST00000523912 TRAV22A0A0B4J277 110 aa4.1□□□□□ -1.75
CTNNA1-240ENST00000523912 MT-ATP8P03928 68 aa4.1□□□□□ -1.75
CTNNA1-240ENST00000523912 UQCRQO14949 82 aa4.09□□□□□ -1.75
CTNNA1-240ENST00000523912 CSAG1Q6PB30 78 aa4.09□□□□□ -1.75
CTNNA1-240ENST00000523912 C1orf64Q8NEQ6 169 aa4.08□□□□□ -1.76
CTNNA1-240ENST00000523912 NEBP20929 6669 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms