RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 HIST1H2BBP33778 126 aa3.08□□□□□ -1.92
PABPC1-220ENST00000522658 HIST1H2BDP58876 126 aa3.08□□□□□ -1.92
PABPC1-220ENST00000522658 SNRPEP62304 92 aaKnown RBP3.08□□□□□ -1.92
PABPC1-220ENST00000522658 HIST1H2BCP62807 126 aa3.08□□□□□ -1.92
PABPC1-220ENST00000522658 HIST2H2BEQ16778 126 aa3.08□□□□□ -1.92
PABPC1-220ENST00000522658 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.08□□□□□ -1.92
PABPC1-220ENST00000522658 HIST1H2BHQ93079 126 aa3.08□□□□□ -1.92
PABPC1-220ENST00000522658 HIST1H4GQ99525 98 aa3.08□□□□□ -1.92
PABPC1-220ENST00000522658 HIST1H2BNQ99877 126 aa3.08□□□□□ -1.92
PABPC1-220ENST00000522658 HIST1H2BMQ99879 126 aa3.08□□□□□ -1.92
PABPC1-220ENST00000522658 A8MWP4 228 aa3.07□□□□□ -1.92
PABPC1-220ENST00000522658 H3BMG7 143 aa3.07□□□□□ -1.92
PABPC1-220ENST00000522658 FABP2P12104 132 aa3.07□□□□□ -1.92
PABPC1-220ENST00000522658 NDUFV3P56181 108 aaKnown RBP3.07□□□□□ -1.92
PABPC1-220ENST00000522658 RAB37Q96AX2 223 aa3.07□□□□□ -1.92
PABPC1-220ENST00000522658 IGHV6-1A0A0B4J1U7 121 aa3.06□□□□□ -1.92
PABPC1-220ENST00000522658 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
PABPC1-220ENST00000522658 LCE3AQ5TA76 89 aa3.06□□□□□ -1.92
PABPC1-220ENST00000522658 LYRM7Q5U5X0 104 aa3.06□□□□□ -1.92
PABPC1-220ENST00000522658 SVIPQ8NHG7 77 aa3.06□□□□□ -1.92
PABPC1-220ENST00000522658 DNAL4O96015 105 aa3.05□□□□□ -1.92
PABPC1-220ENST00000522658 HRES1P13985 223 aa3.05□□□□□ -1.92
PABPC1-220ENST00000522658 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
PABPC1-220ENST00000522658 A0A1B0GV72 72 aa3.04□□□□□ -1.92
PABPC1-220ENST00000522658 KRTAP16-1A8MUX0 517 aa3.04□□□□□ -1.92
PABPC1-220ENST00000522658 H0YGX0 51 aa3.04□□□□□ -1.92
PABPC1-220ENST00000522658 TRACP01848 142 aa3.04□□□□□ -1.92
PABPC1-220ENST00000522658 KRTAP19-6Q3LI70 58 aa3.04□□□□□ -1.92
PABPC1-220ENST00000522658 C8orf87E5RJ46 101 aa3.03□□□□□ -1.92
PABPC1-220ENST00000522658 S100A2P29034 98 aa3.03□□□□□ -1.92
PABPC1-220ENST00000522658 ANKRD29Q8N6D5 301 aa3.03□□□□□ -1.92
PABPC1-220ENST00000522658 DSCR8Q96T75 97 aa3.03□□□□□ -1.92
PABPC1-220ENST00000522658 NOTCH2NLQ7Z3S9 236 aa3.02□□□□□ -1.93
PABPC1-220ENST00000522658 VPS25Q9BRG1 176 aa3.02□□□□□ -1.93
PABPC1-220ENST00000522658 TRBV7-4A0A0J9YYF1 115 aa3.01□□□□□ -1.93
PABPC1-220ENST00000522658 A0A1B0GX51 115 aa3.01□□□□□ -1.93
PABPC1-220ENST00000522658 H3BQ85 93 aa3.01□□□□□ -1.93
PABPC1-220ENST00000522658 DEFB116Q30KQ4 102 aa3.01□□□□□ -1.93
PABPC1-220ENST00000522658 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
PABPC1-220ENST00000522658 WFDC13Q8IUB5 93 aa3.01□□□□□ -1.93
PABPC1-220ENST00000522658 ZCCHC13Q8WW36 166 aaKnown RBP3.01□□□□□ -1.93
PABPC1-220ENST00000522658 A0A1W2PNM2 257 aa3□□□□□ -1.93
PABPC1-220ENST00000522658 NDUFB1O75438 58 aa3□□□□□ -1.93
PABPC1-220ENST00000522658 CCKP06307 115 aa3□□□□□ -1.93
PABPC1-220ENST00000522658 SPINK7P58062 85 aa3□□□□□ -1.93
PABPC1-220ENST00000522658 COA6Q5JTJ3 125 aaKnown RBP3□□□□□ -1.93
PABPC1-220ENST00000522658 ORMDL1Q9P0S3 153 aa3□□□□□ -1.93
PABPC1-220ENST00000522658 A0A0B4J2C4 111 aa2.99□□□□□ -1.93
PABPC1-220ENST00000522658 A0A1B0GVX0 72 aa2.99□□□□□ -1.93
PABPC1-220ENST00000522658 MACF1Q9UPN3 7388 aaKnown RBP2.99□□□□□ -1.93
PABPC1-220ENST00000522658 J3KT08 172 aa2.98□□□□□ -1.93
PABPC1-220ENST00000522658 FAM218AQ96MZ4 157 aa2.98□□□□□ -1.93
PABPC1-220ENST00000522658 TMEM256-PLSCR3K7ERE1 68 aa2.97□□□□□ -1.93
PABPC1-220ENST00000522658 COX6CP09669 75 aa2.97□□□□□ -1.93
PABPC1-220ENST00000522658 PSMB2P49721 201 aa2.97□□□□□ -1.93
PABPC1-220ENST00000522658 S100A6P06703 90 aa2.96□□□□□ -1.94
PABPC1-220ENST00000522658 FAM236AA0A1B0GUQ0 79 aa2.95□□□□□ -1.94
PABPC1-220ENST00000522658 FAM236BA0A1B0GV22 79 aa2.95□□□□□ -1.94
PABPC1-220ENST00000522658 COX8AP10176 69 aa2.95□□□□□ -1.94
PABPC1-220ENST00000522658 LINC00472Q9H8W2 130 aa2.95□□□□□ -1.94
PABPC1-220ENST00000522658 PRO1854Q9UHT4 67 aa2.95□□□□□ -1.94
PABPC1-220ENST00000522658 A6NN06 94 aa2.94□□□□□ -1.94
PABPC1-220ENST00000522658 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
PABPC1-220ENST00000522658 IGKV3D-7A0A0C4DH55 119 aa2.93□□□□□ -1.94
PABPC1-220ENST00000522658 S100A1P23297 94 aa2.93□□□□□ -1.94
PABPC1-220ENST00000522658 KRTAP12-2P59991 146 aa2.93□□□□□ -1.94
PABPC1-220ENST00000522658 RBM3P98179 157 aaKnown RBP2.93□□□□□ -1.94
PABPC1-220ENST00000522658 H1FX-AS1Q4G0G2 97 aa2.93□□□□□ -1.94
PABPC1-220ENST00000522658 HIST1H2BLQ99880 126 aa2.93□□□□□ -1.94
PABPC1-220ENST00000522658 DLEU1O43261 78 aa2.92□□□□□ -1.94
PABPC1-220ENST00000522658 NDUFS5O43920 106 aa2.92□□□□□ -1.94
PABPC1-220ENST00000522658 CEND1Q8N111 149 aa2.92□□□□□ -1.94
PABPC1-220ENST00000522658 HIST3H2BBQ8N257 126 aa2.92□□□□□ -1.94
PABPC1-220ENST00000522658 C14orf144Q96I85 54 aa2.92□□□□□ -1.94
PABPC1-220ENST00000522658 HIGD1BQ9P298 99 aa2.92□□□□□ -1.94
PABPC1-220ENST00000522658 SYNE2Q8WXH0 6885 aaKnown RBP2.91□□□□□ -1.94
PABPC1-220ENST00000522658 C9JAW5 83 aa2.91□□□□□ -1.94
PABPC1-220ENST00000522658 UBE2V1Q13404 147 aa2.91□□□□□ -1.94
PABPC1-220ENST00000522658 SPATA45Q537H7 98 aa2.91□□□□□ -1.94
PABPC1-220ENST00000522658 C8orf17Q9NRJ1 99 aa2.91□□□□□ -1.94
PABPC1-220ENST00000522658 SCGB1C2P0DMR2 95 aa2.9□□□□□ -1.95
PABPC1-220ENST00000522658 Q6ZVQ6 151 aa2.9□□□□□ -1.95
PABPC1-220ENST00000522658 VAMP8Q9BV40 100 aa2.9□□□□□ -1.95
PABPC1-220ENST00000522658 IMUPQ9GZP8 106 aa2.9□□□□□ -1.95
PABPC1-220ENST00000522658 Q5VV11 94 aa2.89□□□□□ -1.95
PABPC1-220ENST00000522658 C7orf65Q6ZTY9 151 aa2.89□□□□□ -1.95
PABPC1-220ENST00000522658 FXYD2P54710 66 aa2.88□□□□□ -1.95
PABPC1-220ENST00000522658 C2orf91Q6ZV80 131 aa2.88□□□□□ -1.95
PABPC1-220ENST00000522658 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
PABPC1-220ENST00000522658 Q6ZQT0 140 aa2.87□□□□□ -1.95
PABPC1-220ENST00000522658 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
PABPC1-220ENST00000522658 HSD52Q0P140 79 aa2.86□□□□□ -1.95
PABPC1-220ENST00000522658 TMEM254Q8TBM7 123 aa2.86□□□□□ -1.95
PABPC1-220ENST00000522658 MRPL34Q9BQ48 92 aaKnown RBP2.86□□□□□ -1.95
PABPC1-220ENST00000522658 hDV103S1A0JD37 113 aa2.85□□□□□ -1.95
PABPC1-220ENST00000522658 K7ERJ3 54 aa2.85□□□□□ -1.95
PABPC1-220ENST00000522658 NREPQ16612 68 aa2.85□□□□□ -1.95
PABPC1-220ENST00000522658 C5orf47Q569G3 176 aa2.85□□□□□ -1.95
PABPC1-220ENST00000522658 A0A1B0GW54 56 aa2.84□□□□□ -1.95
PABPC1-220ENST00000522658 JMJD7-PLA2G4BH0Y9G9 81 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms