RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 NDUFB1O75438 58 aa12.01□□□□□ -0.49
R3HCC1-208ENST00000522012 K7EQZ3 153 aa12□□□□□ -0.49
R3HCC1-208ENST00000522012 HIST1H4AP62805 103 aaKnown RBP11.97□□□□□ -0.49
R3HCC1-208ENST00000522012 IGHV6-1A0A0B4J1U7 121 aa11.96□□□□□ -0.49
R3HCC1-208ENST00000522012 PRR15Q8IV56 129 aa11.96□□□□□ -0.49
R3HCC1-208ENST00000522012 A0A1B0GVX0 72 aa11.96□□□□□ -0.5
R3HCC1-208ENST00000522012 FP248Q71RG6 208 aaPredicted RBP11.93□□□□□ -0.5
R3HCC1-208ENST00000522012 PRR4Q16378 134 aa11.91□□□□□ -0.5
R3HCC1-208ENST00000522012 HMCN2Q8NDA2 5059 aa11.91□□□□□ -0.5
R3HCC1-208ENST00000522012 IGLV7-46A0A075B6I9 117 aa11.89□□□□□ -0.51
R3HCC1-208ENST00000522012 IMUPQ9GZP8 106 aa11.89□□□□□ -0.51
R3HCC1-208ENST00000522012 A0A087WVE0 104 aa11.88□□□□□ -0.51
R3HCC1-208ENST00000522012 NOTCH2NLQ7Z3S9 236 aa11.86□□□□□ -0.51
R3HCC1-208ENST00000522012 LINC00313P59037 77 aa11.86□□□□□ -0.51
R3HCC1-208ENST00000522012 C8orf17Q9NRJ1 99 aa11.86□□□□□ -0.51
R3HCC1-208ENST00000522012 C8orf87E5RJ46 101 aa11.84□□□□□ -0.51
R3HCC1-208ENST00000522012 MMP24-AS1A0A0U1RRL7 71 aa11.82□□□□□ -0.52
R3HCC1-208ENST00000522012 C9orf92A6NGG3 77 aa11.82□□□□□ -0.52
R3HCC1-208ENST00000522012 HCG22E2RYF7 251 aa11.81□□□□□ -0.52
R3HCC1-208ENST00000522012 WFDC13Q8IUB5 93 aa11.81□□□□□ -0.52
R3HCC1-208ENST00000522012 UBR4Q5T4S7 5183 aa11.8□□□□□ -0.52
R3HCC1-208ENST00000522012 CASC2Q6XLA1 102 aa11.79□□□□□ -0.52
R3HCC1-208ENST00000522012 hDV103S1A0JD37 113 aa11.77□□□□□ -0.52
R3HCC1-208ENST00000522012 KRTAP13-3Q3SY46 172 aa11.74□□□□□ -0.53
R3HCC1-208ENST00000522012 TMEM254Q8TBM7 123 aa11.71□□□□□ -0.53
R3HCC1-208ENST00000522012 FAM236AA0A1B0GUQ0 79 aa11.7□□□□□ -0.54
R3HCC1-208ENST00000522012 FAM236BA0A1B0GV22 79 aa11.7□□□□□ -0.54
R3HCC1-208ENST00000522012 KRTAP16-1A8MUX0 517 aa11.7□□□□□ -0.54
R3HCC1-208ENST00000522012 MRPL34Q9BQ48 92 aaKnown RBP11.7□□□□□ -0.54
R3HCC1-208ENST00000522012 TPRXLQ17RH7 258 aa11.69□□□□□ -0.54
R3HCC1-208ENST00000522012 SCGB1A1P11684 91 aa11.66□□□□□ -0.54
R3HCC1-208ENST00000522012 NDUFS5O43920 106 aa11.65□□□□□ -0.55
R3HCC1-208ENST00000522012 XP32Q5T750 250 aa11.6□□□□□ -0.55
R3HCC1-208ENST00000522012 Q8N9P0 234 aaPredicted RBP11.6□□□□□ -0.55
R3HCC1-208ENST00000522012 C20orf166-AS1Q96NR2 134 aa11.58□□□□□ -0.56
R3HCC1-208ENST00000522012 A8MUU9 505 aa11.56□□□□□ -0.56
R3HCC1-208ENST00000522012 ATOX1O00244 68 aa11.54□□□□□ -0.56
R3HCC1-208ENST00000522012 Q75L30 129 aa11.54□□□□□ -0.56
R3HCC1-208ENST00000522012 TP53AIP1Q9HCN2 124 aa11.51□□□□□ -0.57
R3HCC1-208ENST00000522012 OCR1Q9BZK8 76 aa11.5□□□□□ -0.57
R3HCC1-208ENST00000522012 RPL37P61927 97 aaKnown RBP11.5□□□□□ -0.57
R3HCC1-208ENST00000522012 LRP2P98164 4655 aa11.49□□□□□ -0.57
R3HCC1-208ENST00000522012 SMIM20Q8N5G0 67 aa11.48□□□□□ -0.57
R3HCC1-208ENST00000522012 UQCRQO14949 82 aa11.46□□□□□ -0.57
R3HCC1-208ENST00000522012 LPAP08519 4548 aa11.45□□□□□ -0.58
R3HCC1-208ENST00000522012 ATP11AUNQ6ZP68 121 aa11.44□□□□□ -0.58
R3HCC1-208ENST00000522012 TRAV7A0A075B6U4 112 aa11.43□□□□□ -0.58
R3HCC1-208ENST00000522012 ZCCHC13Q8WW36 166 aaKnown RBP11.43□□□□□ -0.58
R3HCC1-208ENST00000522012 Q5W150 140 aa11.42□□□□□ -0.58
R3HCC1-208ENST00000522012 RNF213Q63HN8 5207 aa11.4□□□□□ -0.59
R3HCC1-208ENST00000522012 ANAPC13Q9BS18 74 aa11.4□□□□□ -0.59
R3HCC1-208ENST00000522012 SERP2Q8N6R1 65 aa11.39□□□□□ -0.59
R3HCC1-208ENST00000522012 TRAV22A0A0B4J277 110 aa11.37□□□□□ -0.59
R3HCC1-208ENST00000522012 H0Y9P7 68 aa11.35□□□□□ -0.59
R3HCC1-208ENST00000522012 PCOTHQ58A44 107 aa11.35□□□□□ -0.59
R3HCC1-208ENST00000522012 C5orf47Q569G3 176 aa11.35□□□□□ -0.59
R3HCC1-208ENST00000522012 SEC61BP60468 96 aaKnown RBP11.32□□□□□ -0.6
R3HCC1-208ENST00000522012 MP68P56378 58 aa11.31□□□□□ -0.6
R3HCC1-208ENST00000522012 COX7CP15954 63 aa11.28□□□□□ -0.6
R3HCC1-208ENST00000522012 LINC00208Q96KT6 92 aa11.26□□□□□ -0.61
R3HCC1-208ENST00000522012 C1orf64Q8NEQ6 169 aa11.25□□□□□ -0.61
R3HCC1-208ENST00000522012 IGKV2D-30A0A075B6S6 120 aa11.23□□□□□ -0.61
R3HCC1-208ENST00000522012 IGKV2-30P06310 120 aa11.23□□□□□ -0.61
R3HCC1-208ENST00000522012 H3BPC8 53 aa11.21□□□□□ -0.61
R3HCC1-208ENST00000522012 C20orf197Q8N268 126 aa11.21□□□□□ -0.61
R3HCC1-208ENST00000522012 LOC101927531A0A1B0GV80 90 aa11.2□□□□□ -0.62
R3HCC1-208ENST00000522012 SPINK7P58062 85 aa11.19□□□□□ -0.62
R3HCC1-208ENST00000522012 SNURFQ9Y675 71 aa11.18□□□□□ -0.62
R3HCC1-208ENST00000522012 A0A0U1RQV1 116 aa11.17□□□□□ -0.62
R3HCC1-208ENST00000522012 C7orf65Q6ZTY9 151 aa11.16□□□□□ -0.62
R3HCC1-208ENST00000522012 CYP4F30PQ9H0H9 118 aa11.15□□□□□ -0.62
R3HCC1-208ENST00000522012 CCDC179H3BU77 68 aa11.14□□□□□ -0.63
R3HCC1-208ENST00000522012 PCP4P48539 62 aa11.09□□□□□ -0.63
R3HCC1-208ENST00000522012 KLKP1Q107X0 134 aa11.09□□□□□ -0.63
R3HCC1-208ENST00000522012 KRTAP4-1Q9BYQ7 146 aa11.08□□□□□ -0.64
R3HCC1-208ENST00000522012 MUC17Q685J3 4493 aa11.07□□□□□ -0.64
R3HCC1-208ENST00000522012 CYSTM1Q9H1C7 97 aa11□□□□□ -0.65
R3HCC1-208ENST00000522012 HRES1P13985 223 aa10.98□□□□□ -0.65
R3HCC1-208ENST00000522012 NDUFC1O43677 76 aa10.95□□□□□ -0.66
R3HCC1-208ENST00000522012 C4orf26Q17RF5 130 aa10.94□□□□□ -0.66
R3HCC1-208ENST00000522012 H7BZZ5 65 aa10.91□□□□□ -0.66
R3HCC1-208ENST00000522012 MUC2Q02817 5179 aa10.89□□□□□ -0.67
R3HCC1-208ENST00000522012 RBM12B-AS1Q9P1G2 102 aa10.88□□□□□ -0.67
R3HCC1-208ENST00000522012 MPLKIPQ8TAP9 179 aa10.86□□□□□ -0.67
R3HCC1-208ENST00000522012 COX6B2Q6YFQ2 88 aa10.84□□□□□ -0.67
R3HCC1-208ENST00000522012 SPANXA2-OT1Q8N9U9 137 aa10.81□□□□□ -0.68
R3HCC1-208ENST00000522012 FAM236DA0A1B0GTK5 79 aa10.8□□□□□ -0.68
R3HCC1-208ENST00000522012 FAM236CP0DP71 79 aa10.8□□□□□ -0.68
R3HCC1-208ENST00000522012 KRTAP3-1Q9BYR8 98 aa10.77□□□□□ -0.69
R3HCC1-208ENST00000522012 KRTAP9-2Q9BYQ4 174 aa10.75□□□□□ -0.69
R3HCC1-208ENST00000522012 DMAC1Q96GE9 116 aa10.72□□□□□ -0.69
R3HCC1-208ENST00000522012 TMEM258P61165 79 aa10.71□□□□□ -0.69
R3HCC1-208ENST00000522012 A8MUN3 132 aa10.7□□□□□ -0.7
R3HCC1-208ENST00000522012 KRTAP19-2Q3LHN2 52 aa10.69□□□□□ -0.7
R3HCC1-208ENST00000522012 H1FX-AS1Q4G0G2 97 aa10.68□□□□□ -0.7
R3HCC1-208ENST00000522012 LCE2AQ5TA79 106 aaPredicted RBP10.68□□□□□ -0.7
R3HCC1-208ENST00000522012 ACYP2P14621 99 aa10.65□□□□□ -0.7
R3HCC1-208ENST00000522012 FAT4Q6V0I7 4981 aa10.64□□□□□ -0.71
R3HCC1-208ENST00000522012 ATP5EP56381 51 aaPredicted RBP10.63□□□□□ -0.71
R3HCC1-208ENST00000522012 LCE2CQ5TA81 110 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms