RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 DNAH11Q96DT5 4516 aa3.14□□□□□ -1.91
SDC2-204ENST00000519914 NBEAL1Q6ZS30 2694 aa3.14□□□□□ -1.91
SDC2-204ENST00000519914 PSPHP1O15172 72 aa3.14□□□□□ -1.91
SDC2-204ENST00000519914 PRB2P02812 416 aaPredicted RBP3.14□□□□□ -1.91
SDC2-204ENST00000519914 DSCR10P59022 87 aa3.14□□□□□ -1.91
SDC2-204ENST00000519914 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
SDC2-204ENST00000519914 Q6ZRN7 208 aaPredicted RBP3.14□□□□□ -1.91
SDC2-204ENST00000519914 SCXQ7RTU7 201 aa3.14□□□□□ -1.91
SDC2-204ENST00000519914 DEFB105AQ8NG35 78 aa3.14□□□□□ -1.91
SDC2-204ENST00000519914 NUPR2A6NF83 97 aa3.13□□□□□ -1.91
SDC2-204ENST00000519914 A8MUN3 132 aa3.13□□□□□ -1.91
SDC2-204ENST00000519914 C3orf84H3BNL1 204 aa3.13□□□□□ -1.91
SDC2-204ENST00000519914 MP68P56378 58 aa3.13□□□□□ -1.91
SDC2-204ENST00000519914 Q5VV11 94 aa3.13□□□□□ -1.91
SDC2-204ENST00000519914 IGFL1Q6UW32 110 aa3.13□□□□□ -1.91
SDC2-204ENST00000519914 KRTAP13-1Q8IUC0 172 aa3.13□□□□□ -1.91
SDC2-204ENST00000519914 CSMD3Q7Z407 3707 aa3.12□□□□□ -1.91
SDC2-204ENST00000519914 NBDYA0A0U1RRE5 68 aa3.12□□□□□ -1.91
SDC2-204ENST00000519914 A6NED7 52 aa3.12□□□□□ -1.91
SDC2-204ENST00000519914 SPTSSBQ8NFR3 76 aa3.12□□□□□ -1.91
SDC2-204ENST00000519914 ZCCHC13Q8WW36 166 aaKnown RBP3.12□□□□□ -1.91
SDC2-204ENST00000519914 NOTCH1P46531 2555 aa3.11□□□□□ -1.91
SDC2-204ENST00000519914 RPL37AP61513 92 aaKnown RBP3.11□□□□□ -1.91
SDC2-204ENST00000519914 LINC01554Q52M75 96 aa3.11□□□□□ -1.91
SDC2-204ENST00000519914 CASC2Q6XLA1 102 aa3.11□□□□□ -1.91
SDC2-204ENST00000519914 KRTAP11-1Q8IUC1 163 aa3.11□□□□□ -1.91
SDC2-204ENST00000519914 UBE2DNLQ8IWF7 75 aa3.11□□□□□ -1.91
SDC2-204ENST00000519914 Q8N9L7 120 aa3.11□□□□□ -1.91
SDC2-204ENST00000519914 LINC00208Q96KT6 92 aa3.11□□□□□ -1.91
SDC2-204ENST00000519914 HIGD2AQ9BW72 106 aa3.11□□□□□ -1.91
SDC2-204ENST00000519914 PCLOQ9Y6V0 5065 aa3.1□□□□□ -1.91
SDC2-204ENST00000519914 COL6A5A8TX70 2615 aa3.1□□□□□ -1.91
SDC2-204ENST00000519914 PRLHP81277 87 aa3.1□□□□□ -1.91
SDC2-204ENST00000519914 KMT2AQ03164 3969 aa3.1□□□□□ -1.91
SDC2-204ENST00000519914 ALMS1Q8TCU4 4167 aa3.09□□□□□ -1.91
SDC2-204ENST00000519914 UBR4Q5T4S7 5183 aa3.09□□□□□ -1.91
SDC2-204ENST00000519914 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.09□□□□□ -1.91
SDC2-204ENST00000519914 IGKV2-24A0A0C4DH68 120 aa3.09□□□□□ -1.91
SDC2-204ENST00000519914 K7EQZ3 153 aa3.09□□□□□ -1.91
SDC2-204ENST00000519914 LINC00483Q53H64 154 aa3.09□□□□□ -1.91
SDC2-204ENST00000519914 SPACA4Q8TDM5 124 aa3.09□□□□□ -1.91
SDC2-204ENST00000519914 LINC00472Q9H8W2 130 aa3.09□□□□□ -1.91
SDC2-204ENST00000519914 FRAS1Q86XX4 4008 aa3.09□□□□□ -1.92
SDC2-204ENST00000519914 CHTF8P0CG12 524 aa3.08□□□□□ -1.92
SDC2-204ENST00000519914 PRR26Q8N8Z3 221 aa3.08□□□□□ -1.92
SDC2-204ENST00000519914 PRR15LQ9BU68 103 aa3.08□□□□□ -1.92
SDC2-204ENST00000519914 BIRC6Q9NR09 4857 aa3.08□□□□□ -1.92
SDC2-204ENST00000519914 MGAM2Q2M2H8 2515 aa3.07□□□□□ -1.92
SDC2-204ENST00000519914 A0A087WSZ3 146 aa3.07□□□□□ -1.92
SDC2-204ENST00000519914 Q6ZR54 194 aa3.07□□□□□ -1.92
SDC2-204ENST00000519914 STAB2Q8WWQ8 2551 aa3.07□□□□□ -1.92
SDC2-204ENST00000519914 SACSQ9NZJ4 4579 aa3.07□□□□□ -1.92
SDC2-204ENST00000519914 A0A087WTM6 91 aa3.06□□□□□ -1.92
SDC2-204ENST00000519914 A8MWP4 228 aa3.06□□□□□ -1.92
SDC2-204ENST00000519914 PANO1I0J062 215 aa3.06□□□□□ -1.92
SDC2-204ENST00000519914 RETNLBQ9BQ08 111 aa3.06□□□□□ -1.92
SDC2-204ENST00000519914 PLAC8Q9NZF1 115 aa3.06□□□□□ -1.92
SDC2-204ENST00000519914 LINC01558Q9Y6Z2 57 aa3.06□□□□□ -1.92
SDC2-204ENST00000519914 RYR3Q15413 4870 aa3.05□□□□□ -1.92
SDC2-204ENST00000519914 MT3P25713 68 aa3.05□□□□□ -1.92
SDC2-204ENST00000519914 NOTCH2NLQ7Z3S9 236 aa3.05□□□□□ -1.92
SDC2-204ENST00000519914 ZNF706Q9Y5V0 76 aaPredicted RBP3.05□□□□□ -1.92
SDC2-204ENST00000519914 COL7A1Q02388 2944 aa3.05□□□□□ -1.92
SDC2-204ENST00000519914 MOBPQ13875 183 aa3.04□□□□□ -1.92
SDC2-204ENST00000519914 Q96NJ1 140 aa3.04□□□□□ -1.92
SDC2-204ENST00000519914 IGLV5-52A0A0A0MRZ9 124 aa3.03□□□□□ -1.92
SDC2-204ENST00000519914 A0A0G2JQZ4 141 aa3.03□□□□□ -1.92
SDC2-204ENST00000519914 MMP24-AS1A0A0U1RRL7 71 aa3.03□□□□□ -1.92
SDC2-204ENST00000519914 LINC00313P59037 77 aa3.03□□□□□ -1.92
SDC2-204ENST00000519914 FAT2Q9NYQ8 4349 aa3.03□□□□□ -1.92
SDC2-204ENST00000519914 RTL8CO15255 209 aa3.02□□□□□ -1.93
SDC2-204ENST00000519914 ZNF861PO60384 105 aa3.02□□□□□ -1.93
SDC2-204ENST00000519914 IGLV7-46A0A075B6I9 117 aa3.01□□□□□ -1.93
SDC2-204ENST00000519914 RYR1P21817 5038 aa3.01□□□□□ -1.93
SDC2-204ENST00000519914 KMT2CQ8NEZ4 4911 aaKnown RBP3.01□□□□□ -1.93
SDC2-204ENST00000519914 KRTAP5-9P26371 169 aa3□□□□□ -1.93
SDC2-204ENST00000519914 DEFB116Q30KQ4 102 aa3□□□□□ -1.93
SDC2-204ENST00000519914 WFDC13Q8IUB5 93 aa3□□□□□ -1.93
SDC2-204ENST00000519914 TP53AIP1Q9HCN2 124 aa3□□□□□ -1.93
SDC2-204ENST00000519914 PSORS1C2Q9UIG4 136 aa3□□□□□ -1.93
SDC2-204ENST00000519914 H0Y9P7 68 aa2.99□□□□□ -1.93
SDC2-204ENST00000519914 HYDINQ4G0P3 5121 aa2.99□□□□□ -1.93
SDC2-204ENST00000519914 LRP1BQ9NZR2 4599 aa2.99□□□□□ -1.93
SDC2-204ENST00000519914 PKD1P98161 4303 aa2.99□□□□□ -1.93
SDC2-204ENST00000519914 A0A1B0GVX0 72 aa2.98□□□□□ -1.93
SDC2-204ENST00000519914 C1orf134Q5TEV5 83 aa2.98□□□□□ -1.93
SDC2-204ENST00000519914 COA5Q86WW8 74 aa2.98□□□□□ -1.93
SDC2-204ENST00000519914 C8orf17Q9NRJ1 99 aa2.98□□□□□ -1.93
SDC2-204ENST00000519914 IGHV6-1A0A0B4J1U7 121 aa2.97□□□□□ -1.93
SDC2-204ENST00000519914 IGLV7-43P04211 117 aa2.97□□□□□ -1.93
SDC2-204ENST00000519914 Q6ZSA8 131 aa2.97□□□□□ -1.93
SDC2-204ENST00000519914 SSBP3-AS1Q7Z2R9 100 aa2.97□□□□□ -1.93
SDC2-204ENST00000519914 VPS13BQ7Z7G8 4022 aa2.97□□□□□ -1.93
SDC2-204ENST00000519914 IGLV9-49A0A0B4J1Y8 123 aa2.96□□□□□ -1.93
SDC2-204ENST00000519914 SPAG11AQ6PDA7 123 aa2.96□□□□□ -1.93
SDC2-204ENST00000519914 PKHD1L1Q86WI1 4243 aa2.96□□□□□ -1.94
SDC2-204ENST00000519914 DYNC1H1Q14204 4646 aaKnown RBP2.96□□□□□ -1.94
SDC2-204ENST00000519914 EPPK1P58107 5090 aaKnown RBP2.96□□□□□ -1.94
SDC2-204ENST00000519914 MRPL34Q9BQ48 92 aaKnown RBP2.95□□□□□ -1.94
SDC2-204ENST00000519914 KRTAP13-3Q3SY46 172 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms