RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 PCLOQ9Y6V0 5065 aa4.3□□□□□ -1.72
MRPS28-205ENST00000519386 A0A087WSZ3 146 aa4.3□□□□□ -1.72
MRPS28-205ENST00000519386 J3KT08 172 aa4.3□□□□□ -1.72
MRPS28-205ENST00000519386 C9orf153Q5TBE3 101 aa4.3□□□□□ -1.72
MRPS28-205ENST00000519386 DMBT1Q9UGM3 2413 aaPredicted RBP4.29□□□□□ -1.72
MRPS28-205ENST00000519386 IGKV4-1P06312 121 aa4.29□□□□□ -1.72
MRPS28-205ENST00000519386 SSBP3-AS1Q7Z2R9 100 aa4.29□□□□□ -1.72
MRPS28-205ENST00000519386 A0A087WVE0 104 aa4.28□□□□□ -1.72
MRPS28-205ENST00000519386 IGLV9-49A0A0B4J1Y8 123 aa4.28□□□□□ -1.72
MRPS28-205ENST00000519386 MOBPQ13875 183 aa4.28□□□□□ -1.72
MRPS28-205ENST00000519386 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
MRPS28-205ENST00000519386 MYCBP2O75592 4640 aa4.28□□□□□ -1.72
MRPS28-205ENST00000519386 SPINK6Q6UWN8 80 aa4.27□□□□□ -1.73
MRPS28-205ENST00000519386 UQCRQO14949 82 aa4.26□□□□□ -1.73
MRPS28-205ENST00000519386 KRTAP1-4P0C5Y4 121 aa4.26□□□□□ -1.73
MRPS28-205ENST00000519386 DSCR10P59022 87 aa4.26□□□□□ -1.73
MRPS28-205ENST00000519386 ASB16-AS1Q495Z4 193 aa4.26□□□□□ -1.73
MRPS28-205ENST00000519386 Q5XG85 94 aa4.26□□□□□ -1.73
MRPS28-205ENST00000519386 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
MRPS28-205ENST00000519386 LINC00472Q9H8W2 130 aa4.26□□□□□ -1.73
MRPS28-205ENST00000519386 A8MWP4 228 aa4.25□□□□□ -1.73
MRPS28-205ENST00000519386 COX7CP15954 63 aa4.25□□□□□ -1.73
MRPS28-205ENST00000519386 A0A0G2JQZ4 141 aa4.24□□□□□ -1.73
MRPS28-205ENST00000519386 KRTAP29-1A8MX34 341 aaPredicted RBP4.24□□□□□ -1.73
MRPS28-205ENST00000519386 TRAV7A0A075B6U4 112 aa4.23□□□□□ -1.73
MRPS28-205ENST00000519386 K7EQZ3 153 aa4.23□□□□□ -1.73
MRPS28-205ENST00000519386 OXTP01178 125 aa4.23□□□□□ -1.73
MRPS28-205ENST00000519386 RPS29P62273 56 aaKnown RBP4.23□□□□□ -1.73
MRPS28-205ENST00000519386 Q96NJ1 140 aa4.23□□□□□ -1.73
MRPS28-205ENST00000519386 LRP1Q07954 4544 aaKnown RBP4.22□□□□□ -1.73
MRPS28-205ENST00000519386 A0A087X002 238 aa4.22□□□□□ -1.73
MRPS28-205ENST00000519386 HCG22E2RYF7 251 aa4.22□□□□□ -1.73
MRPS28-205ENST00000519386 NDUFB1O75438 58 aa4.22□□□□□ -1.73
MRPS28-205ENST00000519386 KRTAP13-2Q52LG2 175 aa4.22□□□□□ -1.73
MRPS28-205ENST00000519386 PRR15Q8IV56 129 aa4.22□□□□□ -1.73
MRPS28-205ENST00000519386 FAT3Q8TDW7 4589 aa4.22□□□□□ -1.73
MRPS28-205ENST00000519386 MT1HL1P0DM35 61 aa4.21□□□□□ -1.74
MRPS28-205ENST00000519386 Q8N9L7 120 aa4.21□□□□□ -1.74
MRPS28-205ENST00000519386 LIMD2Q9BT23 127 aa4.21□□□□□ -1.74
MRPS28-205ENST00000519386 ANAPC11Q9NYG5 84 aa4.21□□□□□ -1.74
MRPS28-205ENST00000519386 OCR1Q9BZK8 76 aa4.2□□□□□ -1.74
MRPS28-205ENST00000519386 SPINK1P00995 79 aa4.19□□□□□ -1.74
MRPS28-205ENST00000519386 SPAG11AQ6PDA7 123 aa4.19□□□□□ -1.74
MRPS28-205ENST00000519386 A0A1B0GVX0 72 aa4.18□□□□□ -1.74
MRPS28-205ENST00000519386 CCDC179H3BU77 68 aa4.18□□□□□ -1.74
MRPS28-205ENST00000519386 KLKP1Q107X0 134 aa4.18□□□□□ -1.74
MRPS28-205ENST00000519386 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
MRPS28-205ENST00000519386 PRR26Q8N8Z3 221 aa4.18□□□□□ -1.74
MRPS28-205ENST00000519386 TNXBP22105 4242 aa4.17□□□□□ -1.74
MRPS28-205ENST00000519386 MMP24-AS1A0A0U1RRL7 71 aa4.17□□□□□ -1.74
MRPS28-205ENST00000519386 KRTAP10-8P60410 259 aa4.17□□□□□ -1.74
MRPS28-205ENST00000519386 HRCT1Q6UXD1 115 aa4.17□□□□□ -1.74
MRPS28-205ENST00000519386 CASC2Q6XLA1 102 aa4.17□□□□□ -1.74
MRPS28-205ENST00000519386 TYMSOSQ8TAI1 123 aa4.17□□□□□ -1.74
MRPS28-205ENST00000519386 C8orf87E5RJ46 101 aa4.16□□□□□ -1.74
MRPS28-205ENST00000519386 DEFB116Q30KQ4 102 aa4.16□□□□□ -1.74
MRPS28-205ENST00000519386 NDUFC1O43677 76 aa4.15□□□□□ -1.75
MRPS28-205ENST00000519386 hDV103S1A0JD37 113 aa4.14□□□□□ -1.75
MRPS28-205ENST00000519386 C5orf47Q569G3 176 aa4.14□□□□□ -1.75
MRPS28-205ENST00000519386 LINC00304Q8N9R0 145 aa4.14□□□□□ -1.75
MRPS28-205ENST00000519386 TMEM254Q8TBM7 123 aa4.14□□□□□ -1.75
MRPS28-205ENST00000519386 TP53AIP1Q9HCN2 124 aa4.14□□□□□ -1.75
MRPS28-205ENST00000519386 C8orf17Q9NRJ1 99 aa4.14□□□□□ -1.75
MRPS28-205ENST00000519386 H3BPC8 53 aa4.13□□□□□ -1.75
MRPS28-205ENST00000519386 TMEM258P61165 79 aa4.13□□□□□ -1.75
MRPS28-205ENST00000519386 C1orf195Q5TG92 126 aa4.13□□□□□ -1.75
MRPS28-205ENST00000519386 WFDC13Q8IUB5 93 aa4.13□□□□□ -1.75
MRPS28-205ENST00000519386 HERC1Q15751 4861 aa4.12□□□□□ -1.75
MRPS28-205ENST00000519386 C20orf197Q8N268 126 aa4.12□□□□□ -1.75
MRPS28-205ENST00000519386 IGHV6-1A0A0B4J1U7 121 aa4.11□□□□□ -1.75
MRPS28-205ENST00000519386 A0A0U1RQV1 116 aa4.11□□□□□ -1.75
MRPS28-205ENST00000519386 MP68P56378 58 aa4.1□□□□□ -1.75
MRPS28-205ENST00000519386 ATP5EP56381 51 aaPredicted RBP4.1□□□□□ -1.75
MRPS28-205ENST00000519386 MRPL34Q9BQ48 92 aaKnown RBP4.1□□□□□ -1.75
MRPS28-205ENST00000519386 TRAV22A0A0B4J277 110 aa4.09□□□□□ -1.75
MRPS28-205ENST00000519386 H7BZZ5 65 aa4.09□□□□□ -1.75
MRPS28-205ENST00000519386 ZCCHC13Q8WW36 166 aaKnown RBP4.08□□□□□ -1.76
MRPS28-205ENST00000519386 LINC00313P59037 77 aa4.07□□□□□ -1.76
MRPS28-205ENST00000519386 Q8N9P0 234 aaPredicted RBP4.07□□□□□ -1.76
MRPS28-205ENST00000519386 CYSTM1Q9H1C7 97 aa4.07□□□□□ -1.76
MRPS28-205ENST00000519386 H0Y9P7 68 aa4.05□□□□□ -1.76
MRPS28-205ENST00000519386 SNURFQ9Y675 71 aa4.05□□□□□ -1.76
MRPS28-205ENST00000519386 FAM236DA0A1B0GTK5 79 aa4.04□□□□□ -1.76
MRPS28-205ENST00000519386 KRTAP16-1A8MUX0 517 aa4.04□□□□□ -1.76
MRPS28-205ENST00000519386 FAM236CP0DP71 79 aa4.04□□□□□ -1.76
MRPS28-205ENST00000519386 NOTCH2NLQ7Z3S9 236 aa4.04□□□□□ -1.76
MRPS28-205ENST00000519386 LOC101927531A0A1B0GV80 90 aa4.02□□□□□ -1.77
MRPS28-205ENST00000519386 NDUFS5O43920 106 aa4.02□□□□□ -1.77
MRPS28-205ENST00000519386 RPS28P62857 69 aaKnown RBP4.02□□□□□ -1.77
MRPS28-205ENST00000519386 KRTAP13-3Q3SY46 172 aa4.02□□□□□ -1.77
MRPS28-205ENST00000519386 FP248Q71RG6 208 aaPredicted RBP4.02□□□□□ -1.77
MRPS28-205ENST00000519386 SPANXA2-OT1Q8N9U9 137 aa4.02□□□□□ -1.77
MRPS28-205ENST00000519386 LINC00208Q96KT6 92 aa4.02□□□□□ -1.77
MRPS28-205ENST00000519386 PRR4Q16378 134 aa4.01□□□□□ -1.77
MRPS28-205ENST00000519386 C1orf64Q8NEQ6 169 aa4.01□□□□□ -1.77
MRPS28-205ENST00000519386 RETNLBQ9BQ08 111 aa4.01□□□□□ -1.77
MRPS28-205ENST00000519386 HMCN2Q8NDA2 5059 aa3.98□□□□□ -1.77
MRPS28-205ENST00000519386 C20orf166-AS1Q96NR2 134 aa3.98□□□□□ -1.77
MRPS28-205ENST00000519386 CYP4F30PQ9H0H9 118 aa3.98□□□□□ -1.77
MRPS28-205ENST00000519386 SERP1Q9Y6X1 66 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms