RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 CD164Q04900 197 aa13.57□□□□□ -0.24
SLIT3-204ENST00000518140 PRR26Q8N8Z3 221 aa13.57□□□□□ -0.24
SLIT3-204ENST00000518140 WFDC13Q8IUB5 93 aa13.55□□□□□ -0.24
SLIT3-204ENST00000518140 KRTAP17-1Q9BYP8 105 aa13.55□□□□□ -0.24
SLIT3-204ENST00000518140 CDK2AP2O75956 126 aa13.54□□□□□ -0.24
SLIT3-204ENST00000518140 TYMSOSQ8TAI1 123 aa13.54□□□□□ -0.24
SLIT3-204ENST00000518140 EPPK1P58107 5090 aaKnown RBP13.52□□□□□ -0.24
SLIT3-204ENST00000518140 hDV103S1A0JD37 113 aa13.52□□□□□ -0.25
SLIT3-204ENST00000518140 KRTAP29-1A8MX34 341 aaPredicted RBP13.52□□□□□ -0.25
SLIT3-204ENST00000518140 RYR1P21817 5038 aa13.51□□□□□ -0.25
SLIT3-204ENST00000518140 A8MWP4 228 aa13.51□□□□□ -0.25
SLIT3-204ENST00000518140 FAM229AH3BQW9 127 aa13.5□□□□□ -0.25
SLIT3-204ENST00000518140 PRR15Q8IV56 129 aa13.49□□□□□ -0.25
SLIT3-204ENST00000518140 MPLKIPQ8TAP9 179 aa13.49□□□□□ -0.25
SLIT3-204ENST00000518140 PRO0628Q9UI54 55 aa13.49□□□□□ -0.25
SLIT3-204ENST00000518140 MP68P56378 58 aa13.48□□□□□ -0.25
SLIT3-204ENST00000518140 NDUFB1O75438 58 aa13.48□□□□□ -0.25
SLIT3-204ENST00000518140 Q5VSD8 79 aa13.46□□□□□ -0.25
SLIT3-204ENST00000518140 C1orf64Q8NEQ6 169 aa13.46□□□□□ -0.25
SLIT3-204ENST00000518140 CYP4F30PQ9H0H9 118 aa13.46□□□□□ -0.25
SLIT3-204ENST00000518140 CASC2Q6XLA1 102 aa13.45□□□□□ -0.26
SLIT3-204ENST00000518140 KIAA1109Q2LD37 5005 aa13.45□□□□□ -0.26
SLIT3-204ENST00000518140 PKHD1L1Q86WI1 4243 aa13.44□□□□□ -0.26
SLIT3-204ENST00000518140 TRAV22A0A0B4J277 110 aa13.41□□□□□ -0.26
SLIT3-204ENST00000518140 H3BPC8 53 aa13.4□□□□□ -0.27
SLIT3-204ENST00000518140 ASB16-AS1Q495Z4 193 aa13.4□□□□□ -0.27
SLIT3-204ENST00000518140 C4orf48Q5BLP8 95 aa13.39□□□□□ -0.27
SLIT3-204ENST00000518140 LINC00208Q96KT6 92 aa13.39□□□□□ -0.27
SLIT3-204ENST00000518140 H0Y9P7 68 aa13.36□□□□□ -0.27
SLIT3-204ENST00000518140 C1orf195Q5TG92 126 aa13.36□□□□□ -0.27
SLIT3-204ENST00000518140 LINC00304Q8N9R0 145 aa13.36□□□□□ -0.27
SLIT3-204ENST00000518140 IGHV6-1A0A0B4J1U7 121 aa13.35□□□□□ -0.27
SLIT3-204ENST00000518140 MMP24-AS1A0A0U1RRL7 71 aa13.34□□□□□ -0.27
SLIT3-204ENST00000518140 A0A1B0GVX0 72 aa13.34□□□□□ -0.27
SLIT3-204ENST00000518140 SPINK1P00995 79 aa13.34□□□□□ -0.27
SLIT3-204ENST00000518140 PRR4Q16378 134 aa13.34□□□□□ -0.27
SLIT3-204ENST00000518140 Q1T7F1 81 aa13.34□□□□□ -0.27
SLIT3-204ENST00000518140 NOTCH2NLQ7Z3S9 236 aa13.34□□□□□ -0.27
SLIT3-204ENST00000518140 LRP1Q07954 4544 aaKnown RBP13.33□□□□□ -0.28
SLIT3-204ENST00000518140 BRK1Q8WUW1 75 aa13.3□□□□□ -0.28
SLIT3-204ENST00000518140 LIMD2Q9BT23 127 aa13.3□□□□□ -0.28
SLIT3-204ENST00000518140 SPANXA2-OT1Q8N9U9 137 aa13.3□□□□□ -0.28
SLIT3-204ENST00000518140 C8orf17Q9NRJ1 99 aa13.29□□□□□ -0.28
SLIT3-204ENST00000518140 Q8N1X5 172 aa13.25□□□□□ -0.29
SLIT3-204ENST00000518140 SPAG11AQ6PDA7 123 aa13.25□□□□□ -0.29
SLIT3-204ENST00000518140 FLG2Q5D862 2391 aaPredicted RBP13.23□□□□□ -0.29
SLIT3-204ENST00000518140 TNXBP22105 4242 aa13.23□□□□□ -0.29
SLIT3-204ENST00000518140 RPS29P62273 56 aaKnown RBP13.19□□□□□ -0.3
SLIT3-204ENST00000518140 KRTAP10-8P60410 259 aa13.18□□□□□ -0.3
SLIT3-204ENST00000518140 TP53AIP1Q9HCN2 124 aa13.16□□□□□ -0.3
SLIT3-204ENST00000518140 FAT3Q8TDW7 4589 aa13.16□□□□□ -0.3
SLIT3-204ENST00000518140 V9GYY9 64 aa13.16□□□□□ -0.3
SLIT3-204ENST00000518140 MYCBP2O75592 4640 aa13.12□□□□□ -0.31
SLIT3-204ENST00000518140 MRPL34Q9BQ48 92 aaKnown RBP13.11□□□□□ -0.31
SLIT3-204ENST00000518140 PSPHP1O15172 72 aa13.11□□□□□ -0.31
SLIT3-204ENST00000518140 LINC00313P59037 77 aa13.1□□□□□ -0.31
SLIT3-204ENST00000518140 KRTAP4-5Q9BYR2 181 aa13.09□□□□□ -0.31
SLIT3-204ENST00000518140 IGLV7-46A0A075B6I9 117 aa13.09□□□□□ -0.31
SLIT3-204ENST00000518140 C8orf87E5RJ46 101 aa13.08□□□□□ -0.32
SLIT3-204ENST00000518140 RETNLBQ9BQ08 111 aa13.07□□□□□ -0.32
SLIT3-204ENST00000518140 NDUFS5O43920 106 aa13.06□□□□□ -0.32
SLIT3-204ENST00000518140 A8MUN3 132 aa13.02□□□□□ -0.33
SLIT3-204ENST00000518140 DMBT1Q9UGM3 2413 aaPredicted RBP13.02□□□□□ -0.33
SLIT3-204ENST00000518140 Q8N9P0 234 aaPredicted RBP13.01□□□□□ -0.33
SLIT3-204ENST00000518140 KRTAP16-1A8MUX0 517 aa13.01□□□□□ -0.33
SLIT3-204ENST00000518140 MT1HL1P0DM35 61 aa13.01□□□□□ -0.33
SLIT3-204ENST00000518140 PCOTHQ58A44 107 aa13□□□□□ -0.33
SLIT3-204ENST00000518140 COA5Q86WW8 74 aa12.98□□□□□ -0.33
SLIT3-204ENST00000518140 Q5VV11 94 aa12.96□□□□□ -0.33
SLIT3-204ENST00000518140 Q5W150 140 aa12.92□□□□□ -0.34
SLIT3-204ENST00000518140 C9orf92A6NGG3 77 aa12.89□□□□□ -0.35
SLIT3-204ENST00000518140 PRR15LQ9BU68 103 aa12.87□□□□□ -0.35
SLIT3-204ENST00000518140 BIRC6Q9NR09 4857 aa12.86□□□□□ -0.35
SLIT3-204ENST00000518140 KRTAP13-3Q3SY46 172 aa12.84□□□□□ -0.35
SLIT3-204ENST00000518140 CHKB-CPT1BH3BT56 60 aa12.83□□□□□ -0.36
SLIT3-204ENST00000518140 LOC101927531A0A1B0GV80 90 aa12.82□□□□□ -0.36
SLIT3-204ENST00000518140 Q75L30 129 aa12.79□□□□□ -0.36
SLIT3-204ENST00000518140 ABCA13Q86UQ4 5058 aa12.79□□□□□ -0.36
SLIT3-204ENST00000518140 HRES1P13985 223 aa12.77□□□□□ -0.37
SLIT3-204ENST00000518140 HERC2O95714 4834 aa12.76□□□□□ -0.37
SLIT3-204ENST00000518140 LINC01558Q9Y6Z2 57 aa12.75□□□□□ -0.37
SLIT3-204ENST00000518140 A8MU10 97 aa12.71□□□□□ -0.37
SLIT3-204ENST00000518140 A8MUU9 505 aa12.67□□□□□ -0.38
SLIT3-204ENST00000518140 C20orf166-AS1Q96NR2 134 aa12.67□□□□□ -0.38
SLIT3-204ENST00000518140 A6NED7 52 aa12.66□□□□□ -0.38
SLIT3-204ENST00000518140 PMAIP1Q13794 54 aa12.65□□□□□ -0.38
SLIT3-204ENST00000518140 LCA10Q71F78 164 aa12.63□□□□□ -0.39
SLIT3-204ENST00000518140 ACYP2P14621 99 aa12.58□□□□□ -0.39
SLIT3-204ENST00000518140 IGKV2-30P06310 120 aa12.58□□□□□ -0.4
SLIT3-204ENST00000518140 ATP11AUNQ6ZP68 121 aa12.56□□□□□ -0.4
SLIT3-204ENST00000518140 CDC42SE1Q9NRR8 79 aa12.56□□□□□ -0.4
SLIT3-204ENST00000518140 IGKV2D-30A0A075B6S6 120 aa12.54□□□□□ -0.4
SLIT3-204ENST00000518140 DMAC1Q96GE9 116 aa12.52□□□□□ -0.41
SLIT3-204ENST00000518140 J3QL48 77 aa12.51□□□□□ -0.41
SLIT3-204ENST00000518140 SPTSSBQ8NFR3 76 aa12.5□□□□□ -0.41
SLIT3-204ENST00000518140 XP32Q5T750 250 aa12.5□□□□□ -0.41
SLIT3-204ENST00000518140 SPINK7P58062 85 aa12.46□□□□□ -0.42
SLIT3-204ENST00000518140 LPAP08519 4548 aa12.41□□□□□ -0.42
SLIT3-204ENST00000518140 RPL37P61927 97 aaKnown RBP12.41□□□□□ -0.42
SLIT3-204ENST00000518140 C7orf65Q6ZTY9 151 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms