RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 Q96NJ1 140 aa11.74□□□□□ -0.53
TRIO-223ENST00000515710 A8MWP4 228 aa11.7□□□□□ -0.54
TRIO-223ENST00000515710 ASB16-AS1Q495Z4 193 aa11.7□□□□□ -0.54
TRIO-223ENST00000515710 PRR15Q8IV56 129 aa11.68□□□□□ -0.54
TRIO-223ENST00000515710 PRR26Q8N8Z3 221 aa11.68□□□□□ -0.54
TRIO-223ENST00000515710 FAT1Q14517 4588 aa11.67□□□□□ -0.54
TRIO-223ENST00000515710 NDUFB1O75438 58 aa11.67□□□□□ -0.54
TRIO-223ENST00000515710 C4orf48Q5BLP8 95 aa11.67□□□□□ -0.54
TRIO-223ENST00000515710 BRK1Q8WUW1 75 aa11.66□□□□□ -0.54
TRIO-223ENST00000515710 C1orf195Q5TG92 126 aa11.66□□□□□ -0.54
TRIO-223ENST00000515710 Q5VSD8 79 aa11.64□□□□□ -0.55
TRIO-223ENST00000515710 LIMD2Q9BT23 127 aa11.64□□□□□ -0.55
TRIO-223ENST00000515710 HCG22E2RYF7 251 aa11.62□□□□□ -0.55
TRIO-223ENST00000515710 SPINK1P00995 79 aa11.62□□□□□ -0.55
TRIO-223ENST00000515710 SPAG11AQ6PDA7 123 aa11.61□□□□□ -0.55
TRIO-223ENST00000515710 V9GYY9 64 aa11.61□□□□□ -0.55
TRIO-223ENST00000515710 LINC00304Q8N9R0 145 aa11.59□□□□□ -0.55
TRIO-223ENST00000515710 hDV103S1A0JD37 113 aa11.58□□□□□ -0.55
TRIO-223ENST00000515710 Q1T7F1 81 aa11.58□□□□□ -0.55
TRIO-223ENST00000515710 RPS29P62273 56 aaKnown RBP11.57□□□□□ -0.56
TRIO-223ENST00000515710 A0A1B0GVX0 72 aa11.56□□□□□ -0.56
TRIO-223ENST00000515710 ZCCHC13Q8WW36 166 aaKnown RBP11.56□□□□□ -0.56
TRIO-223ENST00000515710 HSPG2P98160 4391 aa11.55□□□□□ -0.56
TRIO-223ENST00000515710 MPLKIPQ8TAP9 179 aa11.54□□□□□ -0.56
TRIO-223ENST00000515710 KRTAP29-1A8MX34 341 aaPredicted RBP11.53□□□□□ -0.56
TRIO-223ENST00000515710 CASC2Q6XLA1 102 aa11.53□□□□□ -0.56
TRIO-223ENST00000515710 WFDC13Q8IUB5 93 aa11.53□□□□□ -0.56
TRIO-223ENST00000515710 MMP24-AS1A0A0U1RRL7 71 aa11.52□□□□□ -0.57
TRIO-223ENST00000515710 CYP4F30PQ9H0H9 118 aa11.52□□□□□ -0.57
TRIO-223ENST00000515710 PKHD1L1Q86WI1 4243 aa11.51□□□□□ -0.57
TRIO-223ENST00000515710 Q8N1X5 172 aa11.51□□□□□ -0.57
TRIO-223ENST00000515710 C8orf17Q9NRJ1 99 aa11.51□□□□□ -0.57
TRIO-223ENST00000515710 IGHV6-1A0A0B4J1U7 121 aa11.5□□□□□ -0.57
TRIO-223ENST00000515710 RYR1P21817 5038 aa11.5□□□□□ -0.57
TRIO-223ENST00000515710 SEC61GP60059 68 aa11.49□□□□□ -0.57
TRIO-223ENST00000515710 KRTAP17-1Q9BYP8 105 aa11.47□□□□□ -0.57
TRIO-223ENST00000515710 C8orf87E5RJ46 101 aa11.44□□□□□ -0.58
TRIO-223ENST00000515710 C1orf64Q8NEQ6 169 aa11.43□□□□□ -0.58
TRIO-223ENST00000515710 KRTAP10-8P60410 259 aa11.42□□□□□ -0.58
TRIO-223ENST00000515710 NOTCH2NLQ7Z3S9 236 aa11.39□□□□□ -0.59
TRIO-223ENST00000515710 EPPK1P58107 5090 aaKnown RBP11.38□□□□□ -0.59
TRIO-223ENST00000515710 PMAIP1Q13794 54 aa11.38□□□□□ -0.59
TRIO-223ENST00000515710 MRPL34Q9BQ48 92 aaKnown RBP11.38□□□□□ -0.59
TRIO-223ENST00000515710 LINC00313P59037 77 aa11.37□□□□□ -0.59
TRIO-223ENST00000515710 KIAA1109Q2LD37 5005 aa11.34□□□□□ -0.59
TRIO-223ENST00000515710 TRAV22A0A0B4J277 110 aa11.33□□□□□ -0.6
TRIO-223ENST00000515710 TP53AIP1Q9HCN2 124 aa11.33□□□□□ -0.6
TRIO-223ENST00000515710 SPANXA2-OT1Q8N9U9 137 aa11.29□□□□□ -0.6
TRIO-223ENST00000515710 H3BPC8 53 aa11.29□□□□□ -0.6
TRIO-223ENST00000515710 NDUFS5O43920 106 aa11.28□□□□□ -0.6
TRIO-223ENST00000515710 MP68P56378 58 aa11.25□□□□□ -0.61
TRIO-223ENST00000515710 KRTAP16-1A8MUX0 517 aa11.22□□□□□ -0.61
TRIO-223ENST00000515710 H0Y9P7 68 aa11.21□□□□□ -0.61
TRIO-223ENST00000515710 Q8N9P0 234 aaPredicted RBP11.21□□□□□ -0.61
TRIO-223ENST00000515710 MT1HL1P0DM35 61 aa11.2□□□□□ -0.62
TRIO-223ENST00000515710 TNXBP22105 4242 aa11.2□□□□□ -0.62
TRIO-223ENST00000515710 FAT3Q8TDW7 4589 aa11.2□□□□□ -0.62
TRIO-223ENST00000515710 LRP1Q07954 4544 aaKnown RBP11.2□□□□□ -0.62
TRIO-223ENST00000515710 PSPHP1O15172 72 aa11.19□□□□□ -0.62
TRIO-223ENST00000515710 Q5VV11 94 aa11.19□□□□□ -0.62
TRIO-223ENST00000515710 RETNLBQ9BQ08 111 aa11.18□□□□□ -0.62
TRIO-223ENST00000515710 A8MUN3 132 aa11.15□□□□□ -0.62
TRIO-223ENST00000515710 LINC00208Q96KT6 92 aa11.15□□□□□ -0.62
TRIO-223ENST00000515710 KRTAP4-5Q9BYR2 181 aa11.15□□□□□ -0.62
TRIO-223ENST00000515710 FLG2Q5D862 2391 aaPredicted RBP11.13□□□□□ -0.63
TRIO-223ENST00000515710 LOC101927531A0A1B0GV80 90 aa11.09□□□□□ -0.63
TRIO-223ENST00000515710 Q5W150 140 aa11.07□□□□□ -0.64
TRIO-223ENST00000515710 Q75L30 129 aa11.07□□□□□ -0.64
TRIO-223ENST00000515710 KRTAP13-3Q3SY46 172 aa11.07□□□□□ -0.64
TRIO-223ENST00000515710 C9orf92A6NGG3 77 aa11.06□□□□□ -0.64
TRIO-223ENST00000515710 PRR4Q16378 134 aa11.05□□□□□ -0.64
TRIO-223ENST00000515710 ATP11AUNQ6ZP68 121 aa11.05□□□□□ -0.64
TRIO-223ENST00000515710 KTN1-AS1Q86SY8 53 aa11.05□□□□□ -0.64
TRIO-223ENST00000515710 CHKB-CPT1BH3BT56 60 aa11.01□□□□□ -0.65
TRIO-223ENST00000515710 C20orf166-AS1Q96NR2 134 aa11.01□□□□□ -0.65
TRIO-223ENST00000515710 A8MUU9 505 aa10.99□□□□□ -0.65
TRIO-223ENST00000515710 BIRC6Q9NR09 4857 aa10.99□□□□□ -0.65
TRIO-223ENST00000515710 IGLV7-46A0A075B6I9 117 aa10.98□□□□□ -0.65
TRIO-223ENST00000515710 PRR15LQ9BU68 103 aa10.97□□□□□ -0.65
TRIO-223ENST00000515710 MYCBP2O75592 4640 aa10.95□□□□□ -0.66
TRIO-223ENST00000515710 CDC42SE1Q9NRR8 79 aa10.94□□□□□ -0.66
TRIO-223ENST00000515710 DMBT1Q9UGM3 2413 aaPredicted RBP10.92□□□□□ -0.66
TRIO-223ENST00000515710 A6NN06 94 aa10.92□□□□□ -0.66
TRIO-223ENST00000515710 A8MU10 97 aa10.92□□□□□ -0.66
TRIO-223ENST00000515710 COA5Q86WW8 74 aa10.92□□□□□ -0.66
TRIO-223ENST00000515710 LCA10Q71F78 164 aa10.92□□□□□ -0.66
TRIO-223ENST00000515710 IGKV2-30P06310 120 aa10.9□□□□□ -0.66
TRIO-223ENST00000515710 LINC01558Q9Y6Z2 57 aa10.9□□□□□ -0.66
TRIO-223ENST00000515710 PCOTHQ58A44 107 aa10.89□□□□□ -0.67
TRIO-223ENST00000515710 HERC2O95714 4834 aa10.88□□□□□ -0.67
TRIO-223ENST00000515710 J3QL48 77 aa10.87□□□□□ -0.67
TRIO-223ENST00000515710 A6NED7 52 aa10.85□□□□□ -0.67
TRIO-223ENST00000515710 RBM12B-AS1Q9P1G2 102 aa10.85□□□□□ -0.67
TRIO-223ENST00000515710 IGKV2D-30A0A075B6S6 120 aa10.8□□□□□ -0.68
TRIO-223ENST00000515710 XP32Q5T750 250 aa10.8□□□□□ -0.68
TRIO-223ENST00000515710 C7orf65Q6ZTY9 151 aa10.79□□□□□ -0.68
TRIO-223ENST00000515710 SPTSSBQ8NFR3 76 aa10.79□□□□□ -0.68
TRIO-223ENST00000515710 RPL37P61927 97 aaKnown RBP10.78□□□□□ -0.68
TRIO-223ENST00000515710 TPRXLQ17RH7 258 aa10.78□□□□□ -0.68
TRIO-223ENST00000515710 ABCA13Q86UQ4 5058 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms