RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
CDK7-208ENST00000512687 TRBV7-4A0A0J9YYF1 115 aa6.18□□□□□ -1.42
CDK7-208ENST00000512687 UQCR10Q9UDW1 63 aa6.18□□□□□ -1.42
CDK7-208ENST00000512687 KRTAP16-1A8MUX0 517 aa6.17□□□□□ -1.42
CDK7-208ENST00000512687 TMEM256-PLSCR3K7ERE1 68 aa6.16□□□□□ -1.42
CDK7-208ENST00000512687 IGKV4-1P06312 121 aa6.16□□□□□ -1.42
CDK7-208ENST00000512687 COX6CP09669 75 aa6.16□□□□□ -1.42
CDK7-208ENST00000512687 NOTCH2NLQ7Z3S9 236 aa6.16□□□□□ -1.42
CDK7-208ENST00000512687 H3BQ85 93 aa6.15□□□□□ -1.42
CDK7-208ENST00000512687 CCKP06307 115 aa6.15□□□□□ -1.42
CDK7-208ENST00000512687 DEFB116Q30KQ4 102 aa6.15□□□□□ -1.42
CDK7-208ENST00000512687 UBE2V1Q13404 147 aa6.14□□□□□ -1.43
CDK7-208ENST00000512687 LINC00472Q9H8W2 130 aa6.14□□□□□ -1.43
CDK7-208ENST00000512687 TRACP01848 142 aa6.13□□□□□ -1.43
CDK7-208ENST00000512687 LINC00313P59037 77 aa6.13□□□□□ -1.43
CDK7-208ENST00000512687 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
CDK7-208ENST00000512687 IGHV6-1A0A0B4J1U7 121 aa6.09□□□□□ -1.43
CDK7-208ENST00000512687 SCGB1C2P0DMR2 95 aa6.09□□□□□ -1.43
CDK7-208ENST00000512687 VPS25Q9BRG1 176 aa6.09□□□□□ -1.43
CDK7-208ENST00000512687 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.43
CDK7-208ENST00000512687 RBM3P98179 157 aaKnown RBP6.07□□□□□ -1.44
CDK7-208ENST00000512687 NAA38Q9BRA0 125 aaKnown RBP6.07□□□□□ -1.44
CDK7-208ENST00000512687 TRBV20-1A0A075B6N2 111 aa6.06□□□□□ -1.44
CDK7-208ENST00000512687 A0A1B0GVX0 72 aa6.06□□□□□ -1.44
CDK7-208ENST00000512687 BAALC-AS2P0C853 105 aa6.06□□□□□ -1.44
CDK7-208ENST00000512687 HRES1P13985 223 aa6.05□□□□□ -1.44
CDK7-208ENST00000512687 DSCR8Q96T75 97 aa6.05□□□□□ -1.44
CDK7-208ENST00000512687 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
CDK7-208ENST00000512687 MPLKIPQ8TAP9 179 aa6.04□□□□□ -1.44
CDK7-208ENST00000512687 C8orf87E5RJ46 101 aa6.03□□□□□ -1.44
CDK7-208ENST00000512687 C9JAW5 83 aa6.02□□□□□ -1.45
CDK7-208ENST00000512687 Q6ZQT0 140 aa6.01□□□□□ -1.45
CDK7-208ENST00000512687 FAM236DA0A1B0GTK5 79 aa6□□□□□ -1.45
CDK7-208ENST00000512687 M0R143 59 aa6□□□□□ -1.45
CDK7-208ENST00000512687 FAM236CP0DP71 79 aa6□□□□□ -1.45
CDK7-208ENST00000512687 ATXN8Q156A1 80 aa6□□□□□ -1.45
CDK7-208ENST00000512687 J3KT08 172 aa5.98□□□□□ -1.45
CDK7-208ENST00000512687 LOC110117498A0A087WWA1 95 aa5.97□□□□□ -1.45
CDK7-208ENST00000512687 MT2AP02795 61 aa5.97□□□□□ -1.45
CDK7-208ENST00000512687 ZCCHC13Q8WW36 166 aaKnown RBP5.97□□□□□ -1.45
CDK7-208ENST00000512687 USH2AO75445 5202 aa5.97□□□□□ -1.45
CDK7-208ENST00000512687 SMIM6P0DI80 62 aa5.96□□□□□ -1.46
CDK7-208ENST00000512687 RBM12B-AS1Q9P1G2 102 aa5.96□□□□□ -1.46
CDK7-208ENST00000512687 A0A0A0MQY5 61 aa5.95□□□□□ -1.46
CDK7-208ENST00000512687 JMJD7-PLA2G4BH0Y9G9 81 aa5.95□□□□□ -1.46
CDK7-208ENST00000512687 C14orf132Q9NPU4 83 aa5.95□□□□□ -1.46
CDK7-208ENST00000512687 Q8N9P0 234 aaPredicted RBP5.94□□□□□ -1.46
CDK7-208ENST00000512687 KRTAP4-11Q9BYQ6 195 aa5.94□□□□□ -1.46
CDK7-208ENST00000512687 C8orf17Q9NRJ1 99 aa5.94□□□□□ -1.46
CDK7-208ENST00000512687 IGKV3D-7A0A0C4DH55 119 aa5.93□□□□□ -1.46
CDK7-208ENST00000512687 A8MWP4 228 aa5.93□□□□□ -1.46
CDK7-208ENST00000512687 MT1FP04733 61 aa5.93□□□□□ -1.46
CDK7-208ENST00000512687 NDUFB1O75438 58 aa5.92□□□□□ -1.46
CDK7-208ENST00000512687 SSPOA2VEC9 5147 aa5.92□□□□□ -1.46
CDK7-208ENST00000512687 A0A1B0GW54 56 aa5.91□□□□□ -1.46
CDK7-208ENST00000512687 SPINK7P58062 85 aa5.91□□□□□ -1.46
CDK7-208ENST00000512687 BATFQ16520 125 aa5.91□□□□□ -1.46
CDK7-208ENST00000512687 PDE6GP18545 87 aa5.9□□□□□ -1.46
CDK7-208ENST00000512687 LYRM7Q5U5X0 104 aa5.89□□□□□ -1.47
CDK7-208ENST00000512687 MTURNQ8N3F0 131 aa5.88□□□□□ -1.47
CDK7-208ENST00000512687 MMP24-AS1A0A0U1RRL7 71 aa5.87□□□□□ -1.47
CDK7-208ENST00000512687 TSTD3H0UI37 97 aa5.87□□□□□ -1.47
CDK7-208ENST00000512687 Q6ZVQ6 151 aa5.87□□□□□ -1.47
CDK7-208ENST00000512687 PRR15Q8IV56 129 aa5.87□□□□□ -1.47
CDK7-208ENST00000512687 TAX1BP3O14907 124 aa5.86□□□□□ -1.47
CDK7-208ENST00000512687 NREPQ16612 68 aa5.86□□□□□ -1.47
CDK7-208ENST00000512687 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
CDK7-208ENST00000512687 WFDC13Q8IUB5 93 aa5.85□□□□□ -1.47
CDK7-208ENST00000512687 LOC105371267A0A1B0GV96 52 aa5.84□□□□□ -1.47
CDK7-208ENST00000512687 KRTAP10-10P60014 251 aa5.84□□□□□ -1.47
CDK7-208ENST00000512687 A0A1W2PPM0 123 aa5.83□□□□□ -1.48
CDK7-208ENST00000512687 H3BT86 120 aa5.83□□□□□ -1.48
CDK7-208ENST00000512687 K7EQZ3 153 aa5.83□□□□□ -1.48
CDK7-208ENST00000512687 TMEM254Q8TBM7 123 aa5.83□□□□□ -1.48
CDK7-208ENST00000512687 MRPL34Q9BQ48 92 aaKnown RBP5.82□□□□□ -1.48
CDK7-208ENST00000512687 FCGBPQ9Y6R7 5405 aaPredicted RBP5.8□□□□□ -1.48
CDK7-208ENST00000512687 hDV103S1A0JD37 113 aa5.79□□□□□ -1.48
CDK7-208ENST00000512687 NDUFS5O43920 106 aa5.76□□□□□ -1.49
CDK7-208ENST00000512687 BPY2O14599 106 aa5.75□□□□□ -1.49
CDK7-208ENST00000512687 Q5W150 140 aa5.75□□□□□ -1.49
CDK7-208ENST00000512687 Q8N9L7 120 aa5.75□□□□□ -1.49
CDK7-208ENST00000512687 SPCS1Q9Y6A9 102 aa5.73□□□□□ -1.49
CDK7-208ENST00000512687 IGKV2D-30A0A075B6S6 120 aa5.71□□□□□ -1.5
CDK7-208ENST00000512687 IGKV2-30P06310 120 aa5.71□□□□□ -1.5
CDK7-208ENST00000512687 H1FX-AS1Q4G0G2 97 aa5.7□□□□□ -1.5
CDK7-208ENST00000512687 HCG22E2RYF7 251 aa5.69□□□□□ -1.5
CDK7-208ENST00000512687 CASC2Q6XLA1 102 aa5.69□□□□□ -1.5
CDK7-208ENST00000512687 C7orf65Q6ZTY9 151 aa5.69□□□□□ -1.5
CDK7-208ENST00000512687 PRO0461Q9UI25 63 aa5.69□□□□□ -1.5
CDK7-208ENST00000512687 LINC00846Q9NV44 126 aa5.67□□□□□ -1.5
CDK7-208ENST00000512687 K7EP34 96 aa5.64□□□□□ -1.51
CDK7-208ENST00000512687 KRTAP19-6Q3LI70 58 aa5.64□□□□□ -1.51
CDK7-208ENST00000512687 COL5A1-AS1Q5SY13 56 aa5.64□□□□□ -1.51
CDK7-208ENST00000512687 C4orf26Q17RF5 130 aa5.63□□□□□ -1.51
CDK7-208ENST00000512687 MACF1Q9UPN3 7388 aaKnown RBP5.62□□□□□ -1.51
CDK7-208ENST00000512687 CXCL6P80162 114 aa5.61□□□□□ -1.51
CDK7-208ENST00000512687 UBL5Q9BZL1 73 aa5.61□□□□□ -1.51
CDK7-208ENST00000512687 C5orf47Q569G3 176 aa5.54□□□□□ -1.52
CDK7-208ENST00000512687 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
CDK7-208ENST00000512687 ETDBQ3ZM63 59 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms