RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 A0A0B4J2C4 111 aa8.54□□□□□ -1.04
HMGCS1-206ENST00000511774 HSBP1L1C9JCN9 74 aa8.53□□□□□ -1.04
HMGCS1-206ENST00000511774 LYRM7Q5U5X0 104 aa8.5□□□□□ -1.05
HMGCS1-206ENST00000511774 TRIAP1O43715 76 aa8.49□□□□□ -1.05
HMGCS1-206ENST00000511774 IGKV3D-7A0A0C4DH55 119 aa8.48□□□□□ -1.05
HMGCS1-206ENST00000511774 H3BQ85 93 aa8.48□□□□□ -1.05
HMGCS1-206ENST00000511774 COX8AP10176 69 aa8.48□□□□□ -1.05
HMGCS1-206ENST00000511774 SPRR2GQ9BYE4 73 aa8.48□□□□□ -1.05
HMGCS1-206ENST00000511774 ORMDL1Q9P0S3 153 aa8.48□□□□□ -1.05
HMGCS1-206ENST00000511774 VPS25Q9BRG1 176 aa8.47□□□□□ -1.05
HMGCS1-206ENST00000511774 C8orf17Q9NRJ1 99 aa8.47□□□□□ -1.05
HMGCS1-206ENST00000511774 HIST1H2BLQ99880 126 aa8.46□□□□□ -1.06
HMGCS1-206ENST00000511774 DSCR8Q96T75 97 aa8.45□□□□□ -1.06
HMGCS1-206ENST00000511774 J3KT08 172 aa8.43□□□□□ -1.06
HMGCS1-206ENST00000511774 HIST3H2BBQ8N257 126 aa8.43□□□□□ -1.06
HMGCS1-206ENST00000511774 PRO1854Q9UHT4 67 aa8.42□□□□□ -1.06
HMGCS1-206ENST00000511774 DLEU1O43261 78 aa8.41□□□□□ -1.06
HMGCS1-206ENST00000511774 SPRR2EP22531 72 aa8.41□□□□□ -1.06
HMGCS1-206ENST00000511774 SPRR2BP35325 72 aa8.41□□□□□ -1.06
HMGCS1-206ENST00000511774 SPRR2AP35326 72 aa8.41□□□□□ -1.06
HMGCS1-206ENST00000511774 FAM236AA0A1B0GUQ0 79 aa8.4□□□□□ -1.06
HMGCS1-206ENST00000511774 FAM236BA0A1B0GV22 79 aa8.4□□□□□ -1.06
HMGCS1-206ENST00000511774 TMEM256-PLSCR3K7ERE1 68 aa8.4□□□□□ -1.06
HMGCS1-206ENST00000511774 DNAL4O96015 105 aa8.4□□□□□ -1.06
HMGCS1-206ENST00000511774 C21orf62-AS1Q17RA5 79 aa8.39□□□□□ -1.07
HMGCS1-206ENST00000511774 C2orf91Q6ZV80 131 aa8.38□□□□□ -1.07
HMGCS1-206ENST00000511774 Q6ZVQ6 151 aa8.38□□□□□ -1.07
HMGCS1-206ENST00000511774 NDUFB1O75438 58 aa8.37□□□□□ -1.07
HMGCS1-206ENST00000511774 UBE2V1Q13404 147 aa8.37□□□□□ -1.07
HMGCS1-206ENST00000511774 C14orf144Q96I85 54 aa8.37□□□□□ -1.07
HMGCS1-206ENST00000511774 SPRR2FQ96RM1 72 aa8.37□□□□□ -1.07
HMGCS1-206ENST00000511774 HIGD1BQ9P298 99 aa8.37□□□□□ -1.07
HMGCS1-206ENST00000511774 C5orf47Q569G3 176 aa8.36□□□□□ -1.07
HMGCS1-206ENST00000511774 Q6ZQT0 140 aa8.36□□□□□ -1.07
HMGCS1-206ENST00000511774 CEND1Q8N111 149 aa8.36□□□□□ -1.07
HMGCS1-206ENST00000511774 KRTAP2-2Q9BYT5 123 aa8.36□□□□□ -1.07
HMGCS1-206ENST00000511774 KRTAP2-1Q9BYU5 128 aa8.36□□□□□ -1.07
HMGCS1-206ENST00000511774 FXYD2P54710 66 aa8.34□□□□□ -1.07
HMGCS1-206ENST00000511774 S100A2P29034 98 aa8.31□□□□□ -1.08
HMGCS1-206ENST00000511774 RBM3P98179 157 aaKnown RBP8.31□□□□□ -1.08
HMGCS1-206ENST00000511774 IGKV2D-30A0A075B6S6 120 aa8.3□□□□□ -1.08
HMGCS1-206ENST00000511774 IGKV2-30P06310 120 aa8.3□□□□□ -1.08
HMGCS1-206ENST00000511774 MMP24-AS1A0A0U1RRL7 71 aa8.27□□□□□ -1.09
HMGCS1-206ENST00000511774 C4orf26Q17RF5 130 aa8.26□□□□□ -1.09
HMGCS1-206ENST00000511774 Q5W150 140 aa8.26□□□□□ -1.09
HMGCS1-206ENST00000511774 MRPL34Q9BQ48 92 aaKnown RBP8.26□□□□□ -1.09
HMGCS1-206ENST00000511774 K7ERJ3 54 aa8.25□□□□□ -1.09
HMGCS1-206ENST00000511774 SMCPP49901 116 aaPredicted RBP8.25□□□□□ -1.09
HMGCS1-206ENST00000511774 LCE1AQ5T7P2 110 aa8.25□□□□□ -1.09
HMGCS1-206ENST00000511774 TMEM238LA0A1B0GVL6 79 aa8.24□□□□□ -1.09
HMGCS1-206ENST00000511774 A6NJY4 79 aa8.24□□□□□ -1.09
HMGCS1-206ENST00000511774 PSMB2P49721 201 aa8.24□□□□□ -1.09
HMGCS1-206ENST00000511774 PRR15Q8IV56 129 aa8.24□□□□□ -1.09
HMGCS1-206ENST00000511774 TMEM254Q8TBM7 123 aa8.24□□□□□ -1.09
HMGCS1-206ENST00000511774 C9JAW5 83 aa8.22□□□□□ -1.09
HMGCS1-206ENST00000511774 C7orf65Q6ZTY9 151 aa8.22□□□□□ -1.09
HMGCS1-206ENST00000511774 KRTAP3-1Q9BYR8 98 aa8.21□□□□□ -1.1
HMGCS1-206ENST00000511774 IMUPQ9GZP8 106 aa8.21□□□□□ -1.1
HMGCS1-206ENST00000511774 PAM16Q9Y3D7 125 aa8.21□□□□□ -1.1
HMGCS1-206ENST00000511774 SPATA45Q537H7 98 aa8.2□□□□□ -1.1
HMGCS1-206ENST00000511774 KLKP1Q107X0 134 aa8.19□□□□□ -1.1
HMGCS1-206ENST00000511774 NDUFS5O43920 106 aa8.17□□□□□ -1.1
HMGCS1-206ENST00000511774 COX6CP09669 75 aa8.17□□□□□ -1.1
HMGCS1-206ENST00000511774 GPR98Q8WXG9 6306 aa8.16□□□□□ -1.1
HMGCS1-206ENST00000511774 hDV103S1A0JD37 113 aa8.14□□□□□ -1.11
HMGCS1-206ENST00000511774 CSAG1Q6PB30 78 aa8.14□□□□□ -1.11
HMGCS1-206ENST00000511774 LCA10Q71F78 164 aa8.14□□□□□ -1.11
HMGCS1-206ENST00000511774 S4R3F8 94 aa8.14□□□□□ -1.11
HMGCS1-206ENST00000511774 SPRR2DP22532 72 aa8.13□□□□□ -1.11
HMGCS1-206ENST00000511774 BAALC-AS2P0C853 105 aa8.12□□□□□ -1.11
HMGCS1-206ENST00000511774 A0A1B0GW54 56 aa8.11□□□□□ -1.11
HMGCS1-206ENST00000511774 K7EQZ3 153 aa8.09□□□□□ -1.11
HMGCS1-206ENST00000511774 KRTAP8-1Q8IUC2 63 aa8.08□□□□□ -1.12
HMGCS1-206ENST00000511774 VAMP8Q9BV40 100 aa8.06□□□□□ -1.12
HMGCS1-206ENST00000511774 LOC110117498A0A087WWA1 95 aa8.05□□□□□ -1.12
HMGCS1-206ENST00000511774 S100A6P06703 90 aa8.05□□□□□ -1.12
HMGCS1-206ENST00000511774 MT1XP80297 61 aa8.02□□□□□ -1.13
HMGCS1-206ENST00000511774 HSD52Q0P140 79 aa8.02□□□□□ -1.13
HMGCS1-206ENST00000511774 NREPQ16612 68 aa8.01□□□□□ -1.13
HMGCS1-206ENST00000511774 KRTAP3-3Q9BYR6 98 aa8.01□□□□□ -1.13
HMGCS1-206ENST00000511774 SCGB1C2P0DMR2 95 aa8□□□□□ -1.13
HMGCS1-206ENST00000511774 C14orf132Q9NPU4 83 aa7.99□□□□□ -1.13
HMGCS1-206ENST00000511774 C1orf64Q8NEQ6 169 aa7.98□□□□□ -1.13
HMGCS1-206ENST00000511774 LCE3BQ5TA77 95 aa7.97□□□□□ -1.13
HMGCS1-206ENST00000511774 PDE6GP18545 87 aa7.96□□□□□ -1.14
HMGCS1-206ENST00000511774 HCG22E2RYF7 251 aa7.95□□□□□ -1.14
HMGCS1-206ENST00000511774 JMJD7-PLA2G4BH0Y9G9 81 aa7.95□□□□□ -1.14
HMGCS1-206ENST00000511774 CRIPTQ9P021 101 aa7.95□□□□□ -1.14
HMGCS1-206ENST00000511774 KRTAP4-8A0A0G2JLE6 195 aa7.94□□□□□ -1.14
HMGCS1-206ENST00000511774 KRTAP4-8Q9BYQ9 185 aa7.94□□□□□ -1.14
HMGCS1-206ENST00000511774 S100A1P23297 94 aa7.9□□□□□ -1.14
HMGCS1-206ENST00000511774 KRTAP12-2P59991 146 aa7.88□□□□□ -1.15
HMGCS1-206ENST00000511774 Q8N9L7 120 aa7.88□□□□□ -1.15
HMGCS1-206ENST00000511774 PRO2289Q9P1D8 64 aa7.88□□□□□ -1.15
HMGCS1-206ENST00000511774 CASC2Q6XLA1 102 aa7.87□□□□□ -1.15
HMGCS1-206ENST00000511774 A0A087WVE0 104 aa7.86□□□□□ -1.15
HMGCS1-206ENST00000511774 CXCL6P80162 114 aa7.84□□□□□ -1.15
HMGCS1-206ENST00000511774 ATXN8Q156A1 80 aa7.83□□□□□ -1.16
HMGCS1-206ENST00000511774 BPY2O14599 106 aa7.81□□□□□ -1.16
HMGCS1-206ENST00000511774 NAA38Q9BRA0 125 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms