RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 H3BRM9 83 aa1.3□□□□□ -2.2
TOPBP1-208ENST00000511439 KRTAP12-1P59990 96 aa1.3□□□□□ -2.2
TOPBP1-208ENST00000511439 MIR22HGQ0VDD5 57 aa1.3□□□□□ -2.2
TOPBP1-208ENST00000511439 KRTAP19-8Q3LI54 63 aa1.3□□□□□ -2.2
TOPBP1-208ENST00000511439 UNQ6190/PRO20217Q6UXQ8 127 aa1.3□□□□□ -2.2
TOPBP1-208ENST00000511439 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.3□□□□□ -2.2
TOPBP1-208ENST00000511439 SNX29P2Q8IUI4 249 aa1.3□□□□□ -2.2
TOPBP1-208ENST00000511439 ARL17AQ8IVW1 177 aa1.3□□□□□ -2.2
TOPBP1-208ENST00000511439 TCEAL7Q9BRU2 100 aa1.3□□□□□ -2.2
TOPBP1-208ENST00000511439 TMEM242Q9NWH2 141 aa1.3□□□□□ -2.2
TOPBP1-208ENST00000511439 ARMS2P0C7Q2 107 aa1.29□□□□□ -2.2
TOPBP1-208ENST00000511439 ARL14EPLP0DKL9 152 aa1.29□□□□□ -2.2
TOPBP1-208ENST00000511439 LINC00299Q6ZSB3 139 aa1.29□□□□□ -2.2
TOPBP1-208ENST00000511439 Q6ZUT4 128 aa1.29□□□□□ -2.2
TOPBP1-208ENST00000511439 SNURFQ9Y675 71 aa1.29□□□□□ -2.2
TOPBP1-208ENST00000511439 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.28□□□□□ -2.2
TOPBP1-208ENST00000511439 IGKV2-29A2NJV5 120 aaPredicted RBP1.28□□□□□ -2.2
TOPBP1-208ENST00000511439 AKAIN1P0CW23 69 aa1.28□□□□□ -2.2
TOPBP1-208ENST00000511439 ADCYAP1P18509 176 aa1.28□□□□□ -2.2
TOPBP1-208ENST00000511439 OCIAD2Q56VL3 154 aa1.28□□□□□ -2.2
TOPBP1-208ENST00000511439 MEIG1Q5JSS6 88 aa1.28□□□□□ -2.2
TOPBP1-208ENST00000511439 C5orf38Q86SI9 138 aa1.28□□□□□ -2.2
TOPBP1-208ENST00000511439 C5orf17Q8NAS9 161 aa1.28□□□□□ -2.2
TOPBP1-208ENST00000511439 PPDPFLQ8WWR9 84 aa1.28□□□□□ -2.2
TOPBP1-208ENST00000511439 MGST2Q99735 147 aa1.28□□□□□ -2.2
TOPBP1-208ENST00000511439 NAA38Q9BRA0 125 aaKnown RBP1.28□□□□□ -2.2
TOPBP1-208ENST00000511439 SPANXDQ9BXN6 97 aa1.28□□□□□ -2.2
TOPBP1-208ENST00000511439 TRAV1-2A0A0B4J238 106 aa1.27□□□□□ -2.21
TOPBP1-208ENST00000511439 TCRBV3S1A0A5B6 114 aa1.27□□□□□ -2.21
TOPBP1-208ENST00000511439 INE1O15225 51 aa1.27□□□□□ -2.21
TOPBP1-208ENST00000511439 KRTAP13-4Q3LI77 160 aa1.27□□□□□ -2.21
TOPBP1-208ENST00000511439 C9orf153Q5TBE3 101 aa1.27□□□□□ -2.21
TOPBP1-208ENST00000511439 Q86TA4 180 aa1.27□□□□□ -2.21
TOPBP1-208ENST00000511439 C12orf57Q99622 126 aa1.27□□□□□ -2.21
TOPBP1-208ENST00000511439 CYSTM1Q9H1C7 97 aa1.27□□□□□ -2.21
TOPBP1-208ENST00000511439 ARL2-SNX15V9GYD0 113 aa1.27□□□□□ -2.21
TOPBP1-208ENST00000511439 PIGBOS1A0A0B4J2F0 54 aa1.26□□□□□ -2.21
TOPBP1-208ENST00000511439 CCDC179H3BU77 68 aa1.26□□□□□ -2.21
TOPBP1-208ENST00000511439 GNG4P50150 75 aa1.26□□□□□ -2.21
TOPBP1-208ENST00000511439 MIC13Q5XKP0 118 aa1.26□□□□□ -2.21
TOPBP1-208ENST00000511439 CDC42SE1Q9NRR8 79 aa1.26□□□□□ -2.21
TOPBP1-208ENST00000511439 ZFP30Q9Y2G7 519 aa1.26□□□□□ -2.21
TOPBP1-208ENST00000511439 LOC110117498A0A087WWA1 95 aa1.25□□□□□ -2.21
TOPBP1-208ENST00000511439 LOC100130705A0A1B0GUX0 176 aa1.25□□□□□ -2.21
TOPBP1-208ENST00000511439 JMJD7-PLA2G4BH0Y9G9 81 aa1.25□□□□□ -2.21
TOPBP1-208ENST00000511439 M0QY20 66 aa1.25□□□□□ -2.21
TOPBP1-208ENST00000511439 MGPP08493 103 aa1.25□□□□□ -2.21
TOPBP1-208ENST00000511439 SMIM6P0DI80 62 aa1.25□□□□□ -2.21
TOPBP1-208ENST00000511439 UBE2L3P68036 154 aaKnown RBP1.25□□□□□ -2.21
TOPBP1-208ENST00000511439 KRTAP20-2Q3LI61 65 aa1.25□□□□□ -2.21
TOPBP1-208ENST00000511439 SPANXN1Q5VSR9 72 aa1.25□□□□□ -2.21
TOPBP1-208ENST00000511439 SLC25A6P12236 298 aa1.24□□□□□ -2.21
TOPBP1-208ENST00000511439 DMAC1Q96GE9 116 aa1.24□□□□□ -2.21
TOPBP1-208ENST00000511439 FAM167A-AS1Q96KT0 104 aa1.24□□□□□ -2.21
TOPBP1-208ENST00000511439 SPRR2GQ9BYE4 73 aa1.24□□□□□ -2.21
TOPBP1-208ENST00000511439 CDC42SE2Q9NRR3 84 aa1.24□□□□□ -2.21
TOPBP1-208ENST00000511439 PSENENQ9NZ42 101 aa1.24□□□□□ -2.21
TOPBP1-208ENST00000511439 SERP1Q9Y6X1 66 aa1.24□□□□□ -2.21
TOPBP1-208ENST00000511439 IGKV3D-7A0A0C4DH55 119 aa1.23□□□□□ -2.21
TOPBP1-208ENST00000511439 NDUFB6O95139 128 aa1.23□□□□□ -2.21
TOPBP1-208ENST00000511439 PDE6GP18545 87 aa1.23□□□□□ -2.21
TOPBP1-208ENST00000511439 ZNF625Q96I27 306 aaPredicted RBP1.23□□□□□ -2.21
TOPBP1-208ENST00000511439 SEC11CQ9BY50 192 aa1.23□□□□□ -2.21
TOPBP1-208ENST00000511439 SSSCA1O60232 199 aa1.22□□□□□ -2.21
TOPBP1-208ENST00000511439 SNCGO76070 127 aa1.22□□□□□ -2.21
TOPBP1-208ENST00000511439 DNAL4O96015 105 aa1.22□□□□□ -2.21
TOPBP1-208ENST00000511439 SPATA45Q537H7 98 aa1.22□□□□□ -2.21
TOPBP1-208ENST00000511439 S100A16Q96FQ6 103 aaKnown RBP1.22□□□□□ -2.21
TOPBP1-208ENST00000511439 OBSCN-AS1Q96MR7 158 aa1.22□□□□□ -2.21
TOPBP1-208ENST00000511439 GTF2H5Q6ZYL4 71 aa1.21□□□□□ -2.22
TOPBP1-208ENST00000511439 TMEM141Q96I45 108 aa1.21□□□□□ -2.22
TOPBP1-208ENST00000511439 C14orf144Q96I85 54 aa1.21□□□□□ -2.22
TOPBP1-208ENST00000511439 UBE2L5PA0A1B0GUS4 154 aa1.2□□□□□ -2.22
TOPBP1-208ENST00000511439 IGKCP01834 107 aa1.2□□□□□ -2.22
TOPBP1-208ENST00000511439 S100A8P05109 93 aa1.2□□□□□ -2.22
TOPBP1-208ENST00000511439 IL7P13232 177 aa1.2□□□□□ -2.22
TOPBP1-208ENST00000511439 RPL7L1Q6DKI1 246 aaKnown RBP1.2□□□□□ -2.22
TOPBP1-208ENST00000511439 CSAG1Q6PB30 78 aa1.2□□□□□ -2.22
TOPBP1-208ENST00000511439 SYNE1Q8NF91 8797 aaKnown RBP1.19□□□□□ -2.22
TOPBP1-208ENST00000511439 HIGD1CA8MV81 97 aa1.19□□□□□ -2.22
TOPBP1-208ENST00000511439 MRPL54Q6P161 138 aaKnown RBP1.19□□□□□ -2.22
TOPBP1-208ENST00000511439 TRAV23DV6A0A075B6W5 121 aa1.18□□□□□ -2.22
TOPBP1-208ENST00000511439 TMEM218A2RU14 115 aa1.18□□□□□ -2.22
TOPBP1-208ENST00000511439 C7orf77A4D0Y5 90 aa1.18□□□□□ -2.22
TOPBP1-208ENST00000511439 F8VRH5 84 aa1.18□□□□□ -2.22
TOPBP1-208ENST00000511439 I3L3M4 83 aa1.18□□□□□ -2.22
TOPBP1-208ENST00000511439 NPC2P61916 151 aa1.18□□□□□ -2.22
TOPBP1-208ENST00000511439 C8orf59Q8N0T1 100 aaPredicted RBP1.18□□□□□ -2.22
TOPBP1-208ENST00000511439 SVBPQ8N300 66 aa1.18□□□□□ -2.22
TOPBP1-208ENST00000511439 Q96NJ1 140 aa1.18□□□□□ -2.22
TOPBP1-208ENST00000511439 TEX49A0A1B0GTD5 131 aa1.17□□□□□ -2.22
TOPBP1-208ENST00000511439 ETDCA0A1B0GVM5 59 aa1.17□□□□□ -2.22
TOPBP1-208ENST00000511439 CCKP06307 115 aa1.17□□□□□ -2.22
TOPBP1-208ENST00000511439 CRIP1P50238 77 aa1.17□□□□□ -2.22
TOPBP1-208ENST00000511439 MT1XP80297 61 aa1.17□□□□□ -2.22
TOPBP1-208ENST00000511439 HSD52Q0P140 79 aa1.17□□□□□ -2.22
TOPBP1-208ENST00000511439 KRTAP19-3Q7Z4W3 81 aa1.17□□□□□ -2.22
TOPBP1-208ENST00000511439 TOMM7Q9P0U1 55 aa1.17□□□□□ -2.22
TOPBP1-208ENST00000511439 TRBV10-3A0A0K0K1G6 114 aa1.16□□□□□ -2.22
TOPBP1-208ENST00000511439 SMIM31A0A1B0GVY4 71 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms