RNA–Protein interactions for RNA: ENST00000509346.5

GYPA-206, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 383 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-206ENST00000509346 LINC00643Q86TS7 51 aa-0.35□□□□□ -2.47
GYPA-206ENST00000509346 WFDC13Q8IUB5 93 aa-0.35□□□□□ -2.47
GYPA-206ENST00000509346 GAFA1Q96PS6 74 aa-0.35□□□□□ -2.47
GYPA-206ENST00000509346 VPS13AQ96RL7 3174 aa-0.35□□□□□ -2.47
GYPA-206ENST00000509346 BCORQ6W2J9 1755 aa-0.36□□□□□ -2.47
GYPA-206ENST00000509346 LRRC7Q96NW7 1537 aa-0.36□□□□□ -2.47
GYPA-206ENST00000509346 CYB5AP00167 134 aa-0.36□□□□□ -2.47
GYPA-206ENST00000509346 MT1AP04731 61 aa-0.36□□□□□ -2.47
GYPA-206ENST00000509346 RGPD1P0DJD0 1748 aa-0.36□□□□□ -2.47
GYPA-206ENST00000509346 RGPD8O14715 1765 aaPredicted RBP-0.37□□□□□ -2.47
GYPA-206ENST00000509346 RGPD2P0DJD1 1756 aa-0.37□□□□□ -2.47
GYPA-206ENST00000509346 RGPD5Q99666 1765 aa-0.37□□□□□ -2.47
GYPA-206ENST00000509346 CICQ96RK0 1608 aaPredicted RBP-0.37□□□□□ -2.47
GYPA-206ENST00000509346 TRAV21A0A0B4J279 112 aa-0.37□□□□□ -2.47
GYPA-206ENST00000509346 ACYP1P07311 99 aa-0.37□□□□□ -2.47
GYPA-206ENST00000509346 LRRC9Q6ZRR7 1453 aa-0.37□□□□□ -2.47
GYPA-206ENST00000509346 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.37□□□□□ -2.47
GYPA-206ENST00000509346 RGPD4Q7Z3J3 1758 aa-0.37□□□□□ -2.47
GYPA-206ENST00000509346 MT1EP04732 61 aa-0.38□□□□□ -2.47
GYPA-206ENST00000509346 RPL38P63173 70 aaKnown RBP-0.38□□□□□ -2.47
GYPA-206ENST00000509346 MT1XP80297 61 aa-0.38□□□□□ -2.47
GYPA-206ENST00000509346 KRTAP19-2Q3LHN2 52 aa-0.38□□□□□ -2.47
GYPA-206ENST00000509346 TDRG1Q3Y452 100 aa-0.38□□□□□ -2.47
GYPA-206ENST00000509346 PREX1Q8TCU6 1659 aa-0.38□□□□□ -2.47
GYPA-206ENST00000509346 PTPN23Q9H3S7 1636 aa-0.38□□□□□ -2.47
GYPA-206ENST00000509346 CEBPZOSA8MTT3 80 aa-0.39□□□□□ -2.47
GYPA-206ENST00000509346 DEFB121Q5J5C9 76 aa-0.39□□□□□ -2.47
GYPA-206ENST00000509346 DEFB104AQ8WTQ1 72 aa-0.39□□□□□ -2.47
GYPA-206ENST00000509346 RGPD3A6NKT7 1758 aaPredicted RBP-0.4□□□□□ -2.47
GYPA-206ENST00000509346 ADAMTS12P58397 1594 aa-0.4□□□□□ -2.47
GYPA-206ENST00000509346 NDUFA3O95167 84 aa-0.4□□□□□ -2.47
GYPA-206ENST00000509346 TMEM131LA2VDJ0 1609 aa-0.4□□□□□ -2.47
GYPA-206ENST00000509346 USP32Q8NFA0 1604 aa-0.4□□□□□ -2.47
GYPA-206ENST00000509346 NDUFB1O75438 58 aa-0.41□□□□□ -2.48
GYPA-206ENST00000509346 GNG2P59768 71 aa-0.41□□□□□ -2.48
GYPA-206ENST00000509346 MT1LQ93083 61 aa-0.41□□□□□ -2.48
GYPA-206ENST00000509346 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.41□□□□□ -2.48
GYPA-206ENST00000509346 WFDC9Q8NEX5 89 aa-0.42□□□□□ -2.48
GYPA-206ENST00000509346 UACAQ9BZF9 1416 aa-0.43□□□□□ -2.48
GYPA-206ENST00000509346 DEFB4AO15263 64 aa-0.43□□□□□ -2.48
GYPA-206ENST00000509346 KRTAP19-5Q3LI72 72 aa-0.43□□□□□ -2.48
GYPA-206ENST00000509346 PPLO60437 1756 aa-0.43□□□□□ -2.48
GYPA-206ENST00000509346 KIF14Q15058 1648 aa-0.43□□□□□ -2.48
GYPA-206ENST00000509346 ZNF831Q5JPB2 1677 aa-0.43□□□□□ -2.48
GYPA-206ENST00000509346 URB2Q14146 1524 aaKnown RBP-0.43□□□□□ -2.48
GYPA-206ENST00000509346 SUPT6HQ7KZ85 1726 aaKnown RBP-0.44□□□□□ -2.48
GYPA-206ENST00000509346 MAP3K4Q9Y6R4 1608 aa-0.44□□□□□ -2.48
GYPA-206ENST00000509346 KANTRA0A1W2PQU2 76 aa-0.44□□□□□ -2.48
GYPA-206ENST00000509346 RPS29P62273 56 aaKnown RBP-0.44□□□□□ -2.48
GYPA-206ENST00000509346 NCOA2Q15596 1464 aa-0.44□□□□□ -2.48
GYPA-206ENST00000509346 TTTY10Q9BZA0 68 aa-0.45□□□□□ -2.48
GYPA-206ENST00000509346 PRO3102Q9H379 93 aa-0.45□□□□□ -2.48
GYPA-206ENST00000509346 POLR1AO95602 1720 aaPredicted RBP-0.45□□□□□ -2.48
GYPA-206ENST00000509346 CDC42BPAQ5VT25 1732 aa-0.45□□□□□ -2.48
GYPA-206ENST00000509346 KIAA0586Q9BVV6 1533 aa-0.45□□□□□ -2.48
GYPA-206ENST00000509346 CDC42BPGQ6DT37 1551 aa-0.45□□□□□ -2.48
GYPA-206ENST00000509346 ZC3H13Q5T200 1668 aaKnown RBP-0.46□□□□□ -2.48
GYPA-206ENST00000509346 C3orf79P0CE67 100 aa-0.46□□□□□ -2.48
GYPA-206ENST00000509346 DEFB1P60022 68 aa-0.46□□□□□ -2.48
GYPA-206ENST00000509346 DOT1LQ8TEK3 1739 aa-0.47□□□□□ -2.48
GYPA-206ENST00000509346 ARHGAP35Q9NRY4 1499 aa-0.47□□□□□ -2.48
GYPA-206ENST00000509346 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.47□□□□□ -2.48
GYPA-206ENST00000509346 NWD1Q149M9 1564 aa-0.47□□□□□ -2.48
GYPA-206ENST00000509346 PLCH1Q4KWH8 1693 aa-0.47□□□□□ -2.48
GYPA-206ENST00000509346 LTN1O94822 1766 aa-0.47□□□□□ -2.49
GYPA-206ENST00000509346 MAGI3Q5TCQ9 1506 aa-0.48□□□□□ -2.49
GYPA-206ENST00000509346 UMAD1C9J7I0 102 aa-0.48□□□□□ -2.49
GYPA-206ENST00000509346 H0YGG7 62 aa-0.48□□□□□ -2.49
GYPA-206ENST00000509346 ST20Q9HBF5 79 aa-0.48□□□□□ -2.49
GYPA-206ENST00000509346 CCDC88BA6NC98 1476 aa-0.48□□□□□ -2.49
GYPA-206ENST00000509346 PREX2Q70Z35 1606 aa-0.49□□□□□ -2.49
GYPA-206ENST00000509346 WIZO95785 1651 aa-0.49□□□□□ -2.49
GYPA-206ENST00000509346 LY75O60449 1722 aa-0.49□□□□□ -2.49
GYPA-206ENST00000509346 IFI6P09912 130 aa-0.49□□□□□ -2.49
GYPA-206ENST00000509346 DIP2BQ9P265 1576 aa-0.49□□□□□ -2.49
GYPA-206ENST00000509346 MAST1Q9Y2H9 1570 aa-0.49□□□□□ -2.49
GYPA-206ENST00000509346 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.49□□□□□ -2.49
GYPA-206ENST00000509346 C4AP0C0L4 1744 aa-0.5□□□□□ -2.49
GYPA-206ENST00000509346 C4BP0C0L5 1744 aa-0.5□□□□□ -2.49
GYPA-206ENST00000509346 PARP4Q9UKK3 1724 aaKnown RBP-0.5□□□□□ -2.49
GYPA-206ENST00000509346 IFI27P40305 119 aaPredicted RBP-0.5□□□□□ -2.49
GYPA-206ENST00000509346 RB1CC1Q8TDY2 1594 aa-0.5□□□□□ -2.49
GYPA-206ENST00000509346 PLXNC1O60486 1568 aa-0.51□□□□□ -2.49
GYPA-206ENST00000509346 NESP48681 1621 aa-0.51□□□□□ -2.49
GYPA-206ENST00000509346 LINC00158P58513 81 aa-0.51□□□□□ -2.49
GYPA-206ENST00000509346 ADIRFQ15847 76 aa-0.51□□□□□ -2.49
GYPA-206ENST00000509346 ATP5EP2Q5VTU8 51 aa-0.51□□□□□ -2.49
GYPA-206ENST00000509346 ITSN1Q15811 1721 aa-0.52□□□□□ -2.49
GYPA-206ENST00000509346 HMGA1P17096 107 aaKnown RBP-0.52□□□□□ -2.49
GYPA-206ENST00000509346 S100A13Q99584 98 aa-0.52□□□□□ -2.49
GYPA-206ENST00000509346 S4R3F8 94 aa-0.52□□□□□ -2.49
GYPA-206ENST00000509346 PIK3C2BO00750 1634 aa-0.53□□□□□ -2.49
GYPA-206ENST00000509346 DEFB124Q8NES8 71 aa-0.53□□□□□ -2.49
GYPA-206ENST00000509346 ARFGEF2Q9Y6D5 1785 aa-0.53□□□□□ -2.49
GYPA-206ENST00000509346 CLASP1Q7Z460 1538 aa-0.54□□□□□ -2.5
GYPA-206ENST00000509346 EEA1Q15075 1411 aa-0.54□□□□□ -2.5
GYPA-206ENST00000509346 NRAPQ86VF7 1730 aa-0.54□□□□□ -2.5
GYPA-206ENST00000509346 C9orf92A6NGG3 77 aa-0.54□□□□□ -2.5
GYPA-206ENST00000509346 EFCAB6Q5THR3 1501 aa-0.54□□□□□ -2.5
GYPA-206ENST00000509346 DEPDC5O75140 1603 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms