RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-223	ENST00000508249	NAA38	Q9BRA0	125 aa	Known RBP	4.92	□□□□□ -1.62
UBE2D3-223	ENST00000508249	LOC110117498	A0A087WWA1	95 aa		4.91	□□□□□ -1.62
UBE2D3-223	ENST00000508249		A0A1W2PPM0	123 aa		4.91	□□□□□ -1.62
UBE2D3-223	ENST00000508249		H3BT86	120 aa		4.91	□□□□□ -1.62
UBE2D3-223	ENST00000508249	PCOTH	Q58A44	107 aa		4.91	□□□□□ -1.62
UBE2D3-223	ENST00000508249	SIGMAR1	Q99720	223 aa		4.91	□□□□□ -1.62
UBE2D3-223	ENST00000508249	SYNE2	Q8WXH0	6885 aa	Known RBP	4.91	□□□□□ -1.62
UBE2D3-223	ENST00000508249		J3KT08	172 aa		4.9	□□□□□ -1.63
UBE2D3-223	ENST00000508249	TAX1BP3	O14907	124 aa		4.9	□□□□□ -1.63
UBE2D3-223	ENST00000508249	IGKV4-1	P06312	121 aa		4.9	□□□□□ -1.63
UBE2D3-223	ENST00000508249	OBSCN-AS1	Q96MR7	158 aa		4.9	□□□□□ -1.63
UBE2D3-223	ENST00000508249	VPS25	Q9BRG1	176 aa		4.9	□□□□□ -1.63
UBE2D3-223	ENST00000508249	LINC00472	Q9H8W2	130 aa		4.9	□□□□□ -1.63
UBE2D3-223	ENST00000508249	ATP11AUN	Q6ZP68	121 aa		4.89	□□□□□ -1.63
UBE2D3-223	ENST00000508249	COL5A1-AS1	Q5SY13	56 aa		4.88	□□□□□ -1.63
UBE2D3-223	ENST00000508249		Q6ZQT0	140 aa		4.88	□□□□□ -1.63
UBE2D3-223	ENST00000508249	C20orf166-AS1	Q96NR2	134 aa		4.88	□□□□□ -1.63
UBE2D3-223	ENST00000508249	C8orf87	E5RJ46	101 aa		4.87	□□□□□ -1.63
UBE2D3-223	ENST00000508249		M0R2T5	61 aa		4.87	□□□□□ -1.63
UBE2D3-223	ENST00000508249	LINC00313	P59037	77 aa		4.87	□□□□□ -1.63
UBE2D3-223	ENST00000508249	KRTAP19-1	Q8IUB9	90 aa		4.87	□□□□□ -1.63
UBE2D3-223	ENST00000508249		A8MUU9	505 aa		4.86	□□□□□ -1.63
UBE2D3-223	ENST00000508249	NDUFB1	O75438	58 aa		4.85	□□□□□ -1.63
UBE2D3-223	ENST00000508249	KRTAP9-8	Q9BYQ0	159 aa		4.85	□□□□□ -1.63
UBE2D3-223	ENST00000508249	SPCS1	Q9Y6A9	102 aa		4.85	□□□□□ -1.63
UBE2D3-223	ENST00000508249	C14orf132	Q9NPU4	83 aa		4.84	□□□□□ -1.63
UBE2D3-223	ENST00000508249		A0A1B0GVX0	72 aa		4.83	□□□□□ -1.64
UBE2D3-223	ENST00000508249	DSCR10	P59022	87 aa		4.83	□□□□□ -1.64
UBE2D3-223	ENST00000508249	COX6B2	Q6YFQ2	88 aa		4.83	□□□□□ -1.64
UBE2D3-223	ENST00000508249	IGHV6-1	A0A0B4J1U7	121 aa		4.82	□□□□□ -1.64
UBE2D3-223	ENST00000508249	NREP	Q16612	68 aa		4.81	□□□□□ -1.64
UBE2D3-223	ENST00000508249	DEFB116	Q30KQ4	102 aa		4.81	□□□□□ -1.64
UBE2D3-223	ENST00000508249	KRTAP16-1	A8MUX0	517 aa		4.8	□□□□□ -1.64
UBE2D3-223	ENST00000508249		A8MWP4	228 aa		4.8	□□□□□ -1.64
UBE2D3-223	ENST00000508249	GTF2H5	Q6ZYL4	71 aa		4.8	□□□□□ -1.64
UBE2D3-223	ENST00000508249		K7EP34	96 aa		4.79	□□□□□ -1.64
UBE2D3-223	ENST00000508249	MTURN	Q8N3F0	131 aa		4.78	□□□□□ -1.64
UBE2D3-223	ENST00000508249	PCP4L1	A6NKN8	68 aa		4.75	□□□□□ -1.65
UBE2D3-223	ENST00000508249	NOTCH2NL	Q7Z3S9	236 aa		4.75	□□□□□ -1.65
UBE2D3-223	ENST00000508249	PRR15	Q8IV56	129 aa		4.75	□□□□□ -1.65
UBE2D3-223	ENST00000508249	C8orf17	Q9NRJ1	99 aa		4.75	□□□□□ -1.65
UBE2D3-223	ENST00000508249		F8W1H4	67 aa		4.74	□□□□□ -1.65
UBE2D3-223	ENST00000508249		Q8N9P0	234 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE2D3-223	ENST00000508249	PRO0461	Q9UI25	63 aa		4.74	□□□□□ -1.65
UBE2D3-223	ENST00000508249	IGKV3D-7	A0A0C4DH55	119 aa		4.73	□□□□□ -1.65
UBE2D3-223	ENST00000508249	BPY2	O14599	106 aa		4.73	□□□□□ -1.65
UBE2D3-223	ENST00000508249	MT2A	P02795	61 aa		4.72	□□□□□ -1.65
UBE2D3-223	ENST00000508249		Q6ZVQ6	151 aa		4.72	□□□□□ -1.65
UBE2D3-223	ENST00000508249	TMEM254	Q8TBM7	123 aa		4.72	□□□□□ -1.65
UBE2D3-223	ENST00000508249	UBL5	Q9BZL1	73 aa		4.72	□□□□□ -1.65
UBE2D3-223	ENST00000508249	ZCCHC13	Q8WW36	166 aa	Known RBP	4.71	□□□□□ -1.66
UBE2D3-223	ENST00000508249	KRTAP9-3	Q9BYQ3	159 aa		4.71	□□□□□ -1.66
UBE2D3-223	ENST00000508249	MT1F	P04733	61 aa		4.7	□□□□□ -1.66
UBE2D3-223	ENST00000508249	KRTAP6-3	Q3LI67	103 aa		4.7	□□□□□ -1.66
UBE2D3-223	ENST00000508249	MMP24-AS1	A0A0U1RRL7	71 aa		4.69	□□□□□ -1.66
UBE2D3-223	ENST00000508249	MRPL34	Q9BQ48	92 aa	Known RBP	4.69	□□□□□ -1.66
UBE2D3-223	ENST00000508249	hDV103S1	A0JD37	113 aa		4.68	□□□□□ -1.66
UBE2D3-223	ENST00000508249		K7EQZ3	153 aa		4.68	□□□□□ -1.66
UBE2D3-223	ENST00000508249	RBM12B-AS1	Q9P1G2	102 aa		4.68	□□□□□ -1.66
UBE2D3-223	ENST00000508249	KRTAP19-6	Q3LI70	58 aa		4.67	□□□□□ -1.66
UBE2D3-223	ENST00000508249	MUC12	Q9UKN1	5478 aa		4.67	□□□□□ -1.66
UBE2D3-223	ENST00000508249	NEB	P20929	6669 aa		4.67	□□□□□ -1.66
UBE2D3-223	ENST00000508249	LINC00846	Q9NV44	126 aa		4.66	□□□□□ -1.66
UBE2D3-223	ENST00000508249	ETDB	Q3ZM63	59 aa		4.65	□□□□□ -1.67
UBE2D3-223	ENST00000508249	FAM236D	A0A1B0GTK5	79 aa		4.64	□□□□□ -1.67
UBE2D3-223	ENST00000508249	FAM236C	P0DP71	79 aa		4.64	□□□□□ -1.67
UBE2D3-223	ENST00000508249	HRES1	P13985	223 aa		4.64	□□□□□ -1.67
UBE2D3-223	ENST00000508249	MPLKIP	Q8TAP9	179 aa		4.64	□□□□□ -1.67
UBE2D3-223	ENST00000508249	NDUFS5	O43920	106 aa		4.63	□□□□□ -1.67
UBE2D3-223	ENST00000508249	ACYP1	P07311	99 aa		4.63	□□□□□ -1.67
UBE2D3-223	ENST00000508249	SPINK7	P58062	85 aa		4.63	□□□□□ -1.67
UBE2D3-223	ENST00000508249	CASC2	Q6XLA1	102 aa		4.63	□□□□□ -1.67
UBE2D3-223	ENST00000508249	CXCL6	P80162	114 aa		4.62	□□□□□ -1.67
UBE2D3-223	ENST00000508249	FAM240A	A0A1B0GVK7	77 aa		4.61	□□□□□ -1.67
UBE2D3-223	ENST00000508249	WFDC13	Q8IUB5	93 aa		4.61	□□□□□ -1.67
UBE2D3-223	ENST00000508249	HCG22	E2RYF7	251 aa		4.6	□□□□□ -1.67
UBE2D3-223	ENST00000508249		Q8N9L7	120 aa		4.59	□□□□□ -1.67
UBE2D3-223	ENST00000508249	ATP5EP2	Q5VTU8	51 aa		4.58	□□□□□ -1.68
UBE2D3-223	ENST00000508249	C7orf65	Q6ZTY9	151 aa		4.57	□□□□□ -1.68
UBE2D3-223	ENST00000508249	TP53AIP1	Q9HCN2	124 aa		4.57	□□□□□ -1.68
UBE2D3-223	ENST00000508249	KRTAP10-10	P60014	251 aa		4.53	□□□□□ -1.68
UBE2D3-223	ENST00000508249	KRTAP20-1	Q3LI63	56 aa		4.53	□□□□□ -1.68
UBE2D3-223	ENST00000508249	IGKV2D-30	A0A075B6S6	120 aa		4.52	□□□□□ -1.69
UBE2D3-223	ENST00000508249	IGKV2-30	P06310	120 aa		4.52	□□□□□ -1.69
UBE2D3-223	ENST00000508249		J3QR89	54 aa		4.51	□□□□□ -1.69
UBE2D3-223	ENST00000508249		Q5W150	140 aa		4.51	□□□□□ -1.69
UBE2D3-223	ENST00000508249		A0A1B0GV90	55 aa		4.5	□□□□□ -1.69
UBE2D3-223	ENST00000508249	LINC00643	Q86TS7	51 aa		4.5	□□□□□ -1.69
UBE2D3-223	ENST00000508249	H1FX-AS1	Q4G0G2	97 aa		4.48	□□□□□ -1.69
UBE2D3-223	ENST00000508249	MDN1	Q9NU22	5596 aa		4.48	□□□□□ -1.69
UBE2D3-223	ENST00000508249	LOC100996750	A0A140TA64	210 aa		4.47	□□□□□ -1.69
UBE2D3-223	ENST00000508249	KRTAP4-6	Q9BYQ5	205 aa		4.47	□□□□□ -1.69
UBE2D3-223	ENST00000508249	HIST1H4A	P62805	103 aa	Known RBP	4.45	□□□□□ -1.7
UBE2D3-223	ENST00000508249	TRAV22	A0A0B4J277	110 aa		4.44	□□□□□ -1.7
UBE2D3-223	ENST00000508249	LOC101927531	A0A1B0GV80	90 aa		4.43	□□□□□ -1.7
UBE2D3-223	ENST00000508249	ATOX1	O00244	68 aa		4.43	□□□□□ -1.7
UBE2D3-223	ENST00000508249	UQCRQ	O14949	82 aa		4.43	□□□□□ -1.7
UBE2D3-223	ENST00000508249	KMT2D	O14686	5537 aa		4.42	□□□□□ -1.7
UBE2D3-223	ENST00000508249	C4orf26	Q17RF5	130 aa		4.41	□□□□□ -1.7
UBE2D3-223	ENST00000508249	CYP4F30P	Q9H0H9	118 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms