RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 DEFB130BP0DP73 79 aa6.2□□□□□ -1.42
PDLIM5-210ENST00000508216 DEFB130AP0DP74 79 aa6.2□□□□□ -1.42
PDLIM5-210ENST00000508216 Q6ZSA8 131 aa6.2□□□□□ -1.42
PDLIM5-210ENST00000508216 Q8N1X5 172 aa6.2□□□□□ -1.42
PDLIM5-210ENST00000508216 MTORP42345 2549 aa6.2□□□□□ -1.42
PDLIM5-210ENST00000508216 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
PDLIM5-210ENST00000508216 AKAP9Q99996 3911 aa6.19□□□□□ -1.42
PDLIM5-210ENST00000508216 KRTAP4-9Q9BYQ8 210 aa6.18□□□□□ -1.42
PDLIM5-210ENST00000508216 CSMD2Q7Z408 3487 aa6.18□□□□□ -1.42
PDLIM5-210ENST00000508216 A0A096LPF7 62 aa6.17□□□□□ -1.42
PDLIM5-210ENST00000508216 MAP1AP78559 2803 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-210ENST00000508216 KRTAP7-1Q8IUC3 87 aa6.16□□□□□ -1.42
PDLIM5-210ENST00000508216 IGKV2-30P06310 120 aa6.16□□□□□ -1.42
PDLIM5-210ENST00000508216 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
PDLIM5-210ENST00000508216 ANKHD1Q8IWZ3 2542 aaKnown RBP6.16□□□□□ -1.42
PDLIM5-210ENST00000508216 APCP25054 2843 aa6.15□□□□□ -1.42
PDLIM5-210ENST00000508216 TENM2Q9NT68 2774 aa6.15□□□□□ -1.43
PDLIM5-210ENST00000508216 NIPBLQ6KC79 2804 aaeCLIP6.13□□□□□ -1.43
PDLIM5-210ENST00000508216 HIVEP3Q5T1R4 2406 aa6.13□□□□□ -1.43
PDLIM5-210ENST00000508216 NOTCH3Q9UM47 2321 aa6.13□□□□□ -1.43
PDLIM5-210ENST00000508216 Q6YL49 198 aa6.13□□□□□ -1.43
PDLIM5-210ENST00000508216 K7EIL1 84 aa6.12□□□□□ -1.43
PDLIM5-210ENST00000508216 TPRXLQ17RH7 258 aa6.11□□□□□ -1.43
PDLIM5-210ENST00000508216 IGKV2D-30A0A075B6S6 120 aa6.1□□□□□ -1.43
PDLIM5-210ENST00000508216 FBN1P35555 2871 aaKnown RBP6.1□□□□□ -1.43
PDLIM5-210ENST00000508216 A0A1B0GU33 70 aa6.09□□□□□ -1.43
PDLIM5-210ENST00000508216 PRRC2CQ9Y520 2896 aaKnown RBP6.08□□□□□ -1.44
PDLIM5-210ENST00000508216 NBEAL1Q6ZS30 2694 aa6.07□□□□□ -1.44
PDLIM5-210ENST00000508216 H1FX-AS1Q4G0G2 97 aa6.07□□□□□ -1.44
PDLIM5-210ENST00000508216 COX6B2Q6YFQ2 88 aa6.06□□□□□ -1.44
PDLIM5-210ENST00000508216 CCDC168Q8NDH2 2452 aa6.05□□□□□ -1.44
PDLIM5-210ENST00000508216 H3BNG1 76 aa6.05□□□□□ -1.44
PDLIM5-210ENST00000508216 CRIPTQ9P021 101 aa6.05□□□□□ -1.44
PDLIM5-210ENST00000508216 FN1P02751 2386 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-210ENST00000508216 PRLHP81277 87 aa6.02□□□□□ -1.45
PDLIM5-210ENST00000508216 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
PDLIM5-210ENST00000508216 ATRQ13535 2644 aa6.01□□□□□ -1.45
PDLIM5-210ENST00000508216 A0A1W2PPR1 153 aa6□□□□□ -1.45
PDLIM5-210ENST00000508216 LINC01556Q5JQF7 62 aa5.99□□□□□ -1.45
PDLIM5-210ENST00000508216 KRTAP24-1Q3LI83 254 aa5.98□□□□□ -1.45
PDLIM5-210ENST00000508216 DCHS2Q6V1P9 2916 aa5.98□□□□□ -1.45
PDLIM5-210ENST00000508216 STAB1Q9NY15 2570 aa5.96□□□□□ -1.45
PDLIM5-210ENST00000508216 CSPG4Q6UVK1 2322 aa5.96□□□□□ -1.45
PDLIM5-210ENST00000508216 KRTAP10-9P60411 292 aa5.95□□□□□ -1.46
PDLIM5-210ENST00000508216 ZNF469Q96JG9 3925 aaPredicted RBP5.95□□□□□ -1.46
PDLIM5-210ENST00000508216 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
PDLIM5-210ENST00000508216 COL6A5A8TX70 2615 aa5.93□□□□□ -1.46
PDLIM5-210ENST00000508216 SPART-AS1P0CW21 52 aa5.92□□□□□ -1.46
PDLIM5-210ENST00000508216 RPL37P61927 97 aaKnown RBP5.91□□□□□ -1.46
PDLIM5-210ENST00000508216 KRTAP13-1Q8IUC0 172 aa5.91□□□□□ -1.46
PDLIM5-210ENST00000508216 ACANP16112 2415 aa5.9□□□□□ -1.47
PDLIM5-210ENST00000508216 JMJD1CQ15652 2540 aa5.9□□□□□ -1.47
PDLIM5-210ENST00000508216 FLG2Q5D862 2391 aaPredicted RBP5.89□□□□□ -1.47
PDLIM5-210ENST00000508216 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
PDLIM5-210ENST00000508216 HRNRQ86YZ3 2850 aaPredicted RBP5.89□□□□□ -1.47
PDLIM5-210ENST00000508216 NSD1Q96L73 2696 aaPredicted RBP5.87□□□□□ -1.47
PDLIM5-210ENST00000508216 TYMSOSQ8TAI1 123 aa5.87□□□□□ -1.47
PDLIM5-210ENST00000508216 SMR3AQ99954 134 aa5.87□□□□□ -1.47
PDLIM5-210ENST00000508216 CUBNO60494 3623 aa5.85□□□□□ -1.47
PDLIM5-210ENST00000508216 KRTAP4-5Q9BYR2 181 aa5.84□□□□□ -1.47
PDLIM5-210ENST00000508216 A0A096LNI7 61 aa5.81□□□□□ -1.48
PDLIM5-210ENST00000508216 FLNAP21333 2647 aaKnown RBP5.81□□□□□ -1.48
PDLIM5-210ENST00000508216 MXRA5Q9NR99 2828 aa5.81□□□□□ -1.48
PDLIM5-210ENST00000508216 C14orf177Q52M58 125 aa5.8□□□□□ -1.48
PDLIM5-210ENST00000508216 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
PDLIM5-210ENST00000508216 SPINK1P00995 79 aa5.78□□□□□ -1.48
PDLIM5-210ENST00000508216 PRO2289Q9P1D8 64 aa5.78□□□□□ -1.48
PDLIM5-210ENST00000508216 PKD1L1Q8TDX9 2849 aa5.77□□□□□ -1.49
PDLIM5-210ENST00000508216 ANK2Q01484 3957 aa5.76□□□□□ -1.49
PDLIM5-210ENST00000508216 MEGF8Q7Z7M0 2845 aa5.76□□□□□ -1.49
PDLIM5-210ENST00000508216 HTN3P15516 51 aa5.76□□□□□ -1.49
PDLIM5-210ENST00000508216 TLN2Q9Y4G6 2542 aa5.76□□□□□ -1.49
PDLIM5-210ENST00000508216 PLAC4Q8WY50 150 aa5.75□□□□□ -1.49
PDLIM5-210ENST00000508216 VPS13CQ709C8 3753 aa5.74□□□□□ -1.49
PDLIM5-210ENST00000508216 TGP01266 2768 aa5.74□□□□□ -1.49
PDLIM5-210ENST00000508216 DEFB135Q30KP9 77 aa5.74□□□□□ -1.49
PDLIM5-210ENST00000508216 DEFB4AO15263 64 aa5.73□□□□□ -1.49
PDLIM5-210ENST00000508216 NOTCH1P46531 2555 aa5.73□□□□□ -1.49
PDLIM5-210ENST00000508216 SVEP1Q4LDE5 3571 aa5.71□□□□□ -1.5
PDLIM5-210ENST00000508216 KRTAP5-3Q6L8H2 238 aa5.7□□□□□ -1.5
PDLIM5-210ENST00000508216 NBEAL2Q6ZNJ1 2754 aa5.69□□□□□ -1.5
PDLIM5-210ENST00000508216 HIVEP2P31629 2446 aa5.67□□□□□ -1.5
PDLIM5-210ENST00000508216 SPINK6Q6UWN8 80 aa5.66□□□□□ -1.5
PDLIM5-210ENST00000508216 RYR3Q15413 4870 aa5.65□□□□□ -1.5
PDLIM5-210ENST00000508216 Q6ZRN7 208 aaPredicted RBP5.63□□□□□ -1.51
PDLIM5-210ENST00000508216 KMT2CQ8NEZ4 4911 aaKnown RBP5.63□□□□□ -1.51
PDLIM5-210ENST00000508216 ANK3Q12955 4377 aaKnown RBP5.62□□□□□ -1.51
PDLIM5-210ENST00000508216 SONP18583 2426 aaKnown RBP5.61□□□□□ -1.51
PDLIM5-210ENST00000508216 S4R3F8 94 aa5.6□□□□□ -1.51
PDLIM5-210ENST00000508216 DNAH1Q9P2D7 4330 aa5.59□□□□□ -1.51
PDLIM5-210ENST00000508216 KRTAP9-8Q9BYQ0 159 aa5.59□□□□□ -1.51
PDLIM5-210ENST00000508216 ZANQ9Y493 2812 aa5.59□□□□□ -1.52
PDLIM5-210ENST00000508216 MGAM2Q2M2H8 2515 aa5.57□□□□□ -1.52
PDLIM5-210ENST00000508216 BIRC6Q9NR09 4857 aa5.55□□□□□ -1.52
PDLIM5-210ENST00000508216 KRTAP10-6P60371 365 aaPredicted RBP5.55□□□□□ -1.52
PDLIM5-210ENST00000508216 KRTAP1-1Q07627 177 aa5.55□□□□□ -1.52
PDLIM5-210ENST00000508216 SPACA4Q8TDM5 124 aa5.54□□□□□ -1.52
PDLIM5-210ENST00000508216 VWFP04275 2813 aa5.53□□□□□ -1.52
PDLIM5-210ENST00000508216 PRKDCP78527 4128 aaKnown RBP5.52□□□□□ -1.53
PDLIM5-210ENST00000508216 INE1O15225 51 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms