RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 A0A1W2PNM2 257 aa4.38□□□□□ -1.71
PTPN20-216ENST00000506080 H3BMG7 143 aa4.38□□□□□ -1.71
PTPN20-216ENST00000506080 DEFB116Q30KQ4 102 aa4.38□□□□□ -1.71
PTPN20-216ENST00000506080 IGHV6-1A0A0B4J1U7 121 aa4.36□□□□□ -1.71
PTPN20-216ENST00000506080 KRTAP20-1Q3LI63 56 aa4.36□□□□□ -1.71
PTPN20-216ENST00000506080 SPINK7P58062 85 aa4.35□□□□□ -1.71
PTPN20-216ENST00000506080 FABP2P12104 132 aa4.34□□□□□ -1.71
PTPN20-216ENST00000506080 FAM218AQ96MZ4 157 aa4.34□□□□□ -1.71
PTPN20-216ENST00000506080 SNCGO76070 127 aa4.33□□□□□ -1.72
PTPN20-216ENST00000506080 SNRPEP62304 92 aaKnown RBP4.32□□□□□ -1.72
PTPN20-216ENST00000506080 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
PTPN20-216ENST00000506080 ZCCHC13Q8WW36 166 aaKnown RBP4.32□□□□□ -1.72
PTPN20-216ENST00000506080 A0A1B0GV72 72 aa4.31□□□□□ -1.72
PTPN20-216ENST00000506080 COA6Q5JTJ3 125 aaKnown RBP4.31□□□□□ -1.72
PTPN20-216ENST00000506080 WFDC13Q8IUB5 93 aa4.31□□□□□ -1.72
PTPN20-216ENST00000506080 HIST1H4GQ99525 98 aa4.31□□□□□ -1.72
PTPN20-216ENST00000506080 TRBV7-4A0A0J9YYF1 115 aa4.3□□□□□ -1.72
PTPN20-216ENST00000506080 H0YGX0 51 aa4.3□□□□□ -1.72
PTPN20-216ENST00000506080 LINC00472Q9H8W2 130 aa4.3□□□□□ -1.72
PTPN20-216ENST00000506080 ANKRD29Q8N6D5 301 aa4.29□□□□□ -1.72
PTPN20-216ENST00000506080 A0A1B0GVX0 72 aa4.29□□□□□ -1.72
PTPN20-216ENST00000506080 HSBP1L1C9JCN9 74 aa4.29□□□□□ -1.72
PTPN20-216ENST00000506080 C8orf87E5RJ46 101 aa4.29□□□□□ -1.72
PTPN20-216ENST00000506080 RAB37Q96AX2 223 aa4.29□□□□□ -1.72
PTPN20-216ENST00000506080 A6NN06 94 aa4.27□□□□□ -1.73
PTPN20-216ENST00000506080 TRACP01848 142 aa4.26□□□□□ -1.73
PTPN20-216ENST00000506080 A0A1B0GX51 115 aa4.25□□□□□ -1.73
PTPN20-216ENST00000506080 CCKP06307 115 aa4.25□□□□□ -1.73
PTPN20-216ENST00000506080 MDN1Q9NU22 5596 aa4.25□□□□□ -1.73
PTPN20-216ENST00000506080 A0A0B4J2C4 111 aa4.23□□□□□ -1.73
PTPN20-216ENST00000506080 LYRM7Q5U5X0 104 aa4.23□□□□□ -1.73
PTPN20-216ENST00000506080 VPS25Q9BRG1 176 aa4.22□□□□□ -1.73
PTPN20-216ENST00000506080 H1FX-AS1Q4G0G2 97 aa4.21□□□□□ -1.73
PTPN20-216ENST00000506080 ORMDL1Q9P0S3 153 aa4.21□□□□□ -1.73
PTPN20-216ENST00000506080 KMT2DO14686 5537 aa4.21□□□□□ -1.74
PTPN20-216ENST00000506080 COX8AP10176 69 aa4.21□□□□□ -1.74
PTPN20-216ENST00000506080 DNAL4O96015 105 aa4.2□□□□□ -1.74
PTPN20-216ENST00000506080 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
PTPN20-216ENST00000506080 HIST1H2BLQ99880 126 aa4.2□□□□□ -1.74
PTPN20-216ENST00000506080 MT1BP07438 61 aa4.19□□□□□ -1.74
PTPN20-216ENST00000506080 S100A2P29034 98 aa4.19□□□□□ -1.74
PTPN20-216ENST00000506080 HIST3H2BBQ8N257 126 aa4.19□□□□□ -1.74
PTPN20-216ENST00000506080 TMEM256-PLSCR3K7ERE1 68 aa4.18□□□□□ -1.74
PTPN20-216ENST00000506080 PRO1854Q9UHT4 67 aa4.18□□□□□ -1.74
PTPN20-216ENST00000506080 IGKV3D-7A0A0C4DH55 119 aa4.17□□□□□ -1.74
PTPN20-216ENST00000506080 H3BQ85 93 aa4.17□□□□□ -1.74
PTPN20-216ENST00000506080 J3KT08 172 aa4.17□□□□□ -1.74
PTPN20-216ENST00000506080 MT3P25713 68 aa4.17□□□□□ -1.74
PTPN20-216ENST00000506080 Q5VV11 94 aa4.17□□□□□ -1.74
PTPN20-216ENST00000506080 C8orf17Q9NRJ1 99 aa4.17□□□□□ -1.74
PTPN20-216ENST00000506080 DLEU1O43261 78 aa4.16□□□□□ -1.74
PTPN20-216ENST00000506080 NDUFB1O75438 58 aa4.16□□□□□ -1.74
PTPN20-216ENST00000506080 C14orf144Q96I85 54 aa4.16□□□□□ -1.74
PTPN20-216ENST00000506080 DSCR8Q96T75 97 aa4.16□□□□□ -1.74
PTPN20-216ENST00000506080 KRTAP2-3P0C7H8 128 aa4.15□□□□□ -1.74
PTPN20-216ENST00000506080 KRTAP2-4Q9BYR9 128 aa4.15□□□□□ -1.74
PTPN20-216ENST00000506080 HIGD1BQ9P298 99 aa4.15□□□□□ -1.74
PTPN20-216ENST00000506080 FAM236AA0A1B0GUQ0 79 aa4.14□□□□□ -1.75
PTPN20-216ENST00000506080 FAM236BA0A1B0GV22 79 aa4.14□□□□□ -1.75
PTPN20-216ENST00000506080 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
PTPN20-216ENST00000506080 CEND1Q8N111 149 aa4.14□□□□□ -1.75
PTPN20-216ENST00000506080 UBE2V1Q13404 147 aa4.13□□□□□ -1.75
PTPN20-216ENST00000506080 C2orf91Q6ZV80 131 aa4.13□□□□□ -1.75
PTPN20-216ENST00000506080 PSMB2P49721 201 aa4.12□□□□□ -1.75
PTPN20-216ENST00000506080 FXYD2P54710 66 aa4.12□□□□□ -1.75
PTPN20-216ENST00000506080 RBM3P98179 157 aaKnown RBP4.12□□□□□ -1.75
PTPN20-216ENST00000506080 Q6ZVQ6 151 aa4.12□□□□□ -1.75
PTPN20-216ENST00000506080 KRTAP19-8Q3LI54 63 aa4.12□□□□□ -1.75
PTPN20-216ENST00000506080 Q6ZQT0 140 aa4.12□□□□□ -1.75
PTPN20-216ENST00000506080 C5orf47Q569G3 176 aa4.11□□□□□ -1.75
PTPN20-216ENST00000506080 PAM16Q9Y3D7 125 aa4.11□□□□□ -1.75
PTPN20-216ENST00000506080 C9JAW5 83 aa4.09□□□□□ -1.75
PTPN20-216ENST00000506080 K7ERJ3 54 aa4.09□□□□□ -1.75
PTPN20-216ENST00000506080 COX6CP09669 75 aa4.09□□□□□ -1.75
PTPN20-216ENST00000506080 SPATA45Q537H7 98 aa4.09□□□□□ -1.75
PTPN20-216ENST00000506080 SPRR2GQ9BYE4 73 aa4.09□□□□□ -1.75
PTPN20-216ENST00000506080 MRPL34Q9BQ48 92 aaKnown RBP4.08□□□□□ -1.76
PTPN20-216ENST00000506080 NDUFS5O43920 106 aa4.07□□□□□ -1.76
PTPN20-216ENST00000506080 S100A6P06703 90 aa4.07□□□□□ -1.76
PTPN20-216ENST00000506080 MMP24-AS1A0A0U1RRL7 71 aa4.06□□□□□ -1.76
PTPN20-216ENST00000506080 PRR15Q8IV56 129 aa4.06□□□□□ -1.76
PTPN20-216ENST00000506080 TMEM254Q8TBM7 123 aa4.06□□□□□ -1.76
PTPN20-216ENST00000506080 SPRR2EP22531 72 aa4.05□□□□□ -1.76
PTPN20-216ENST00000506080 SPRR2BP35325 72 aa4.05□□□□□ -1.76
PTPN20-216ENST00000506080 SPRR2AP35326 72 aa4.05□□□□□ -1.76
PTPN20-216ENST00000506080 C4orf26Q17RF5 130 aa4.05□□□□□ -1.76
PTPN20-216ENST00000506080 C7orf65Q6ZTY9 151 aa4.05□□□□□ -1.76
PTPN20-216ENST00000506080 IMUPQ9GZP8 106 aa4.05□□□□□ -1.76
PTPN20-216ENST00000506080 SPRR2FQ96RM1 72 aa4.04□□□□□ -1.76
PTPN20-216ENST00000506080 VAMP8Q9BV40 100 aa4.04□□□□□ -1.76
PTPN20-216ENST00000506080 hDV103S1A0JD37 113 aa4.03□□□□□ -1.76
PTPN20-216ENST00000506080 BAALC-AS2P0C853 105 aa4.03□□□□□ -1.76
PTPN20-216ENST00000506080 SCGB1C2P0DMR2 95 aa4.03□□□□□ -1.76
PTPN20-216ENST00000506080 Q5W150 140 aa4.03□□□□□ -1.76
PTPN20-216ENST00000506080 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
PTPN20-216ENST00000506080 S4R3F8 94 aa4.01□□□□□ -1.77
PTPN20-216ENST00000506080 S100A1P23297 94 aa4□□□□□ -1.77
PTPN20-216ENST00000506080 HSD52Q0P140 79 aa4□□□□□ -1.77
PTPN20-216ENST00000506080 KLKP1Q107X0 134 aa4□□□□□ -1.77
PTPN20-216ENST00000506080 NREPQ16612 68 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 292.8 ms