RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 LINC00472Q9H8W2 130 aa5.36□□□□□ -1.55
TPM3-218ENST00000505010 IGKV4-1P06312 121 aa5.35□□□□□ -1.55
TPM3-218ENST00000505010 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
TPM3-218ENST00000505010 Q5XG85 94 aa5.35□□□□□ -1.55
TPM3-218ENST00000505010 Q96NJ1 140 aa5.35□□□□□ -1.55
TPM3-218ENST00000505010 J3KT08 172 aa5.34□□□□□ -1.55
TPM3-218ENST00000505010 HIST1H4AP62805 103 aaKnown RBP5.34□□□□□ -1.55
TPM3-218ENST00000505010 ASB16-AS1Q495Z4 193 aa5.34□□□□□ -1.55
TPM3-218ENST00000505010 DSCR10P59022 87 aa5.33□□□□□ -1.56
TPM3-218ENST00000505010 Q8N9L7 120 aa5.33□□□□□ -1.56
TPM3-218ENST00000505010 A0A0U1RQV1 116 aa5.32□□□□□ -1.56
TPM3-218ENST00000505010 A8MWP4 228 aa5.31□□□□□ -1.56
TPM3-218ENST00000505010 K7EQZ3 153 aa5.31□□□□□ -1.56
TPM3-218ENST00000505010 C1orf195Q5TG92 126 aa5.31□□□□□ -1.56
TPM3-218ENST00000505010 A0A087WVE0 104 aa5.3□□□□□ -1.56
TPM3-218ENST00000505010 IMUPQ9GZP8 106 aa5.3□□□□□ -1.56
TPM3-218ENST00000505010 NDUFB1O75438 58 aa5.29□□□□□ -1.56
TPM3-218ENST00000505010 RETNLBQ9BQ08 111 aa5.29□□□□□ -1.56
TPM3-218ENST00000505010 IGHV6-1A0A0B4J1U7 121 aa5.28□□□□□ -1.56
TPM3-218ENST00000505010 A0A1B0GVX0 72 aa5.28□□□□□ -1.56
TPM3-218ENST00000505010 PRR15Q8IV56 129 aa5.27□□□□□ -1.57
TPM3-218ENST00000505010 FAM236AA0A1B0GUQ0 79 aa5.25□□□□□ -1.57
TPM3-218ENST00000505010 FAM236BA0A1B0GV22 79 aa5.25□□□□□ -1.57
TPM3-218ENST00000505010 HCG22E2RYF7 251 aa5.24□□□□□ -1.57
TPM3-218ENST00000505010 WFDC13Q8IUB5 93 aa5.24□□□□□ -1.57
TPM3-218ENST00000505010 FSIP2Q5CZC0 6907 aa5.24□□□□□ -1.57
TPM3-218ENST00000505010 MMP24-AS1A0A0U1RRL7 71 aa5.23□□□□□ -1.57
TPM3-218ENST00000505010 C8orf17Q9NRJ1 99 aa5.23□□□□□ -1.57
TPM3-218ENST00000505010 C8orf87E5RJ46 101 aa5.22□□□□□ -1.57
TPM3-218ENST00000505010 LCE2AQ5TA79 106 aaPredicted RBP5.22□□□□□ -1.57
TPM3-218ENST00000505010 CASC2Q6XLA1 102 aa5.22□□□□□ -1.57
TPM3-218ENST00000505010 LCE2BO14633 110 aa5.21□□□□□ -1.58
TPM3-218ENST00000505010 SCGB1A1P11684 91 aa5.21□□□□□ -1.58
TPM3-218ENST00000505010 LINC00313P59037 77 aa5.2□□□□□ -1.58
TPM3-218ENST00000505010 FP248Q71RG6 208 aaPredicted RBP5.2□□□□□ -1.58
TPM3-218ENST00000505010 NOTCH2NLQ7Z3S9 236 aa5.2□□□□□ -1.58
TPM3-218ENST00000505010 hDV103S1A0JD37 113 aa5.19□□□□□ -1.58
TPM3-218ENST00000505010 C9orf92A6NGG3 77 aa5.18□□□□□ -1.58
TPM3-218ENST00000505010 PRR4Q16378 134 aa5.18□□□□□ -1.58
TPM3-218ENST00000505010 TMEM254Q8TBM7 123 aa5.18□□□□□ -1.58
TPM3-218ENST00000505010 IGLV7-46A0A075B6I9 117 aa5.17□□□□□ -1.58
TPM3-218ENST00000505010 ATOX1O00244 68 aa5.17□□□□□ -1.58
TPM3-218ENST00000505010 MRPL34Q9BQ48 92 aaKnown RBP5.16□□□□□ -1.58
TPM3-218ENST00000505010 NDUFS5O43920 106 aa5.15□□□□□ -1.59
TPM3-218ENST00000505010 KRTAP16-1A8MUX0 517 aa5.14□□□□□ -1.59
TPM3-218ENST00000505010 ANAPC13Q9BS18 74 aa5.14□□□□□ -1.59
TPM3-218ENST00000505010 SMIM20Q8N5G0 67 aa5.12□□□□□ -1.59
TPM3-218ENST00000505010 OCR1Q9BZK8 76 aa5.12□□□□□ -1.59
TPM3-218ENST00000505010 TRAV7A0A075B6U4 112 aa5.11□□□□□ -1.59
TPM3-218ENST00000505010 KRTAP13-3Q3SY46 172 aa5.11□□□□□ -1.59
TPM3-218ENST00000505010 CRCT1Q9UGL9 99 aa5.11□□□□□ -1.59
TPM3-218ENST00000505010 SERP2Q8N6R1 65 aa5.1□□□□□ -1.59
TPM3-218ENST00000505010 Q8N9P0 234 aaPredicted RBP5.09□□□□□ -1.59
TPM3-218ENST00000505010 TP53AIP1Q9HCN2 124 aa5.09□□□□□ -1.59
TPM3-218ENST00000505010 UQCRQO14949 82 aa5.08□□□□□ -1.6
TPM3-218ENST00000505010 TPRXLQ17RH7 258 aa5.08□□□□□ -1.6
TPM3-218ENST00000505010 XP32Q5T750 250 aa5.07□□□□□ -1.6
TPM3-218ENST00000505010 MUC17Q685J3 4493 aa5.06□□□□□ -1.6
TPM3-218ENST00000505010 A8MUU9 505 aa5.06□□□□□ -1.6
TPM3-218ENST00000505010 COX7CP15954 63 aa5.06□□□□□ -1.6
TPM3-218ENST00000505010 C20orf166-AS1Q96NR2 134 aa5.06□□□□□ -1.6
TPM3-218ENST00000505010 H0Y9P7 68 aa5.05□□□□□ -1.6
TPM3-218ENST00000505010 PCP4P48539 62 aa5.05□□□□□ -1.6
TPM3-218ENST00000505010 Q75L30 129 aa5.05□□□□□ -1.6
TPM3-218ENST00000505010 TRAV22A0A0B4J277 110 aa5.04□□□□□ -1.6
TPM3-218ENST00000505010 MP68P56378 58 aa5.04□□□□□ -1.6
TPM3-218ENST00000505010 RPL37P61927 97 aaKnown RBP5.03□□□□□ -1.6
TPM3-218ENST00000505010 C5orf47Q569G3 176 aa5.03□□□□□ -1.6
TPM3-218ENST00000505010 ZCCHC13Q8WW36 166 aaKnown RBP5.03□□□□□ -1.6
TPM3-218ENST00000505010 CCDC179H3BU77 68 aa5.02□□□□□ -1.61
TPM3-218ENST00000505010 Q5W150 140 aa5.02□□□□□ -1.61
TPM3-218ENST00000505010 C20orf197Q8N268 126 aa5.02□□□□□ -1.61
TPM3-218ENST00000505010 LINC00208Q96KT6 92 aa5□□□□□ -1.61
TPM3-218ENST00000505010 SNURFQ9Y675 71 aa5□□□□□ -1.61
TPM3-218ENST00000505010 ATP11AUNQ6ZP68 121 aa4.99□□□□□ -1.61
TPM3-218ENST00000505010 H3BPC8 53 aa4.98□□□□□ -1.61
TPM3-218ENST00000505010 C1orf64Q8NEQ6 169 aa4.98□□□□□ -1.61
TPM3-218ENST00000505010 IGKV2D-30A0A075B6S6 120 aa4.96□□□□□ -1.62
TPM3-218ENST00000505010 LOC101927531A0A1B0GV80 90 aa4.96□□□□□ -1.62
TPM3-218ENST00000505010 IGKV2-30P06310 120 aa4.96□□□□□ -1.62
TPM3-218ENST00000505010 KLKP1Q107X0 134 aa4.95□□□□□ -1.62
TPM3-218ENST00000505010 PCOTHQ58A44 107 aa4.95□□□□□ -1.62
TPM3-218ENST00000505010 CYSTM1Q9H1C7 97 aa4.94□□□□□ -1.62
TPM3-218ENST00000505010 C7orf65Q6ZTY9 151 aa4.93□□□□□ -1.62
TPM3-218ENST00000505010 SEC61BP60468 96 aaKnown RBP4.92□□□□□ -1.62
TPM3-218ENST00000505010 CYP4F30PQ9H0H9 118 aa4.92□□□□□ -1.62
TPM3-218ENST00000505010 NDUFC1O43677 76 aa4.9□□□□□ -1.63
TPM3-218ENST00000505010 SPINK7P58062 85 aa4.89□□□□□ -1.63
TPM3-218ENST00000505010 H7BZZ5 65 aa4.88□□□□□ -1.63
TPM3-218ENST00000505010 HRES1P13985 223 aa4.85□□□□□ -1.63
TPM3-218ENST00000505010 TMEM258P61165 79 aa4.84□□□□□ -1.63
TPM3-218ENST00000505010 KRTAP9-7A8MTY7 169 aa4.83□□□□□ -1.64
TPM3-218ENST00000505010 LCE2CQ5TA81 110 aa4.83□□□□□ -1.64
TPM3-218ENST00000505010 FAM236DA0A1B0GTK5 79 aa4.82□□□□□ -1.64
TPM3-218ENST00000505010 FAM236CP0DP71 79 aa4.82□□□□□ -1.64
TPM3-218ENST00000505010 C4orf26Q17RF5 130 aa4.81□□□□□ -1.64
TPM3-218ENST00000505010 SPANXA2-OT1Q8N9U9 137 aa4.81□□□□□ -1.64
TPM3-218ENST00000505010 ATP5EP56381 51 aaPredicted RBP4.8□□□□□ -1.64
TPM3-218ENST00000505010 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
TPM3-218ENST00000505010 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms