RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 A0A1B0GVX0 72 aa11.25□□□□□ -0.61
CDC42SE2-206ENST00000503291 C9orf92A6NGG3 77 aa11.25□□□□□ -0.61
CDC42SE2-206ENST00000503291 HMCN2Q8NDA2 5059 aa11.24□□□□□ -0.61
CDC42SE2-206ENST00000503291 CDIP1Q9H305 208 aa11.23□□□□□ -0.61
CDC42SE2-206ENST00000503291 K7EQZ3 153 aa11.23□□□□□ -0.61
CDC42SE2-206ENST00000503291 CXCL6P80162 114 aa11.23□□□□□ -0.61
CDC42SE2-206ENST00000503291 LINC00643Q86TS7 51 aa11.23□□□□□ -0.61
CDC42SE2-206ENST00000503291 PRR15Q8IV56 129 aa11.22□□□□□ -0.61
CDC42SE2-206ENST00000503291 LPAP08519 4548 aa11.22□□□□□ -0.61
CDC42SE2-206ENST00000503291 Q8N9L7 120 aa11.21□□□□□ -0.61
CDC42SE2-206ENST00000503291 NOTCH2NLQ7Z3S9 236 aa11.2□□□□□ -0.62
CDC42SE2-206ENST00000503291 LINC00313P59037 77 aa11.19□□□□□ -0.62
CDC42SE2-206ENST00000503291 ATP5EP2Q5VTU8 51 aa11.17□□□□□ -0.62
CDC42SE2-206ENST00000503291 C8orf87E5RJ46 101 aa11.15□□□□□ -0.62
CDC42SE2-206ENST00000503291 C8orf17Q9NRJ1 99 aa11.13□□□□□ -0.63
CDC42SE2-206ENST00000503291 XP32Q5T750 250 aa11.11□□□□□ -0.63
CDC42SE2-206ENST00000503291 LRP2P98164 4655 aa11.1□□□□□ -0.63
CDC42SE2-206ENST00000503291 MMP24-AS1A0A0U1RRL7 71 aa11.09□□□□□ -0.63
CDC42SE2-206ENST00000503291 KRTAP16-1A8MUX0 517 aa11.08□□□□□ -0.64
CDC42SE2-206ENST00000503291 HIST1H4AP62805 103 aaKnown RBP11.07□□□□□ -0.64
CDC42SE2-206ENST00000503291 hDV103S1A0JD37 113 aa11.04□□□□□ -0.64
CDC42SE2-206ENST00000503291 WFDC13Q8IUB5 93 aa11.02□□□□□ -0.64
CDC42SE2-206ENST00000503291 HCG22E2RYF7 251 aa11.02□□□□□ -0.65
CDC42SE2-206ENST00000503291 MT-ATP8P03928 68 aa11.01□□□□□ -0.65
CDC42SE2-206ENST00000503291 CASC2Q6XLA1 102 aa11.01□□□□□ -0.65
CDC42SE2-206ENST00000503291 C20orf166-AS1Q96NR2 134 aa11.01□□□□□ -0.65
CDC42SE2-206ENST00000503291 TMEM254Q8TBM7 123 aa10.99□□□□□ -0.65
CDC42SE2-206ENST00000503291 MRPL34Q9BQ48 92 aaKnown RBP10.99□□□□□ -0.65
CDC42SE2-206ENST00000503291 A0A087WVE0 104 aa10.99□□□□□ -0.65
CDC42SE2-206ENST00000503291 A8MUU9 505 aa10.99□□□□□ -0.65
CDC42SE2-206ENST00000503291 Q75L30 129 aa10.98□□□□□ -0.65
CDC42SE2-206ENST00000503291 RPL37P61927 97 aaKnown RBP10.97□□□□□ -0.65
CDC42SE2-206ENST00000503291 Q8N9P0 234 aaPredicted RBP10.96□□□□□ -0.65
CDC42SE2-206ENST00000503291 IMUPQ9GZP8 106 aa10.94□□□□□ -0.66
CDC42SE2-206ENST00000503291 NDUFS5O43920 106 aa10.9□□□□□ -0.66
CDC42SE2-206ENST00000503291 SEC61BP60468 96 aaKnown RBP10.88□□□□□ -0.67
CDC42SE2-206ENST00000503291 ATP11AUNQ6ZP68 121 aa10.87□□□□□ -0.67
CDC42SE2-206ENST00000503291 PCOTHQ58A44 107 aa10.86□□□□□ -0.67
CDC42SE2-206ENST00000503291 UBR4Q5T4S7 5183 aa10.81□□□□□ -0.68
CDC42SE2-206ENST00000503291 ZCCHC13Q8WW36 166 aaKnown RBP10.8□□□□□ -0.68
CDC42SE2-206ENST00000503291 MUC17Q685J3 4493 aa10.76□□□□□ -0.69
CDC42SE2-206ENST00000503291 TP53AIP1Q9HCN2 124 aa10.76□□□□□ -0.69
CDC42SE2-206ENST00000503291 Q5W150 140 aa10.75□□□□□ -0.69
CDC42SE2-206ENST00000503291 FAM236AA0A1B0GUQ0 79 aa10.74□□□□□ -0.69
CDC42SE2-206ENST00000503291 FAM236BA0A1B0GV22 79 aa10.74□□□□□ -0.69
CDC42SE2-206ENST00000503291 SCGB1A1P11684 91 aa10.74□□□□□ -0.69
CDC42SE2-206ENST00000503291 KRTAP4-1Q9BYQ7 146 aa10.69□□□□□ -0.7
CDC42SE2-206ENST00000503291 OCR1Q9BZK8 76 aa10.68□□□□□ -0.7
CDC42SE2-206ENST00000503291 UQCRQO14949 82 aa10.66□□□□□ -0.7
CDC42SE2-206ENST00000503291 MUC2Q02817 5179 aa10.64□□□□□ -0.71
CDC42SE2-206ENST00000503291 TRAV22A0A0B4J277 110 aa10.61□□□□□ -0.71
CDC42SE2-206ENST00000503291 RNF213Q63HN8 5207 aa10.61□□□□□ -0.71
CDC42SE2-206ENST00000503291 SPINK7P58062 85 aa10.59□□□□□ -0.71
CDC42SE2-206ENST00000503291 ATOX1O00244 68 aa10.58□□□□□ -0.72
CDC42SE2-206ENST00000503291 SMIM20Q8N5G0 67 aa10.57□□□□□ -0.72
CDC42SE2-206ENST00000503291 H0Y9P7 68 aa10.56□□□□□ -0.72
CDC42SE2-206ENST00000503291 IGKV2D-30A0A075B6S6 120 aa10.55□□□□□ -0.72
CDC42SE2-206ENST00000503291 IGKV2-30P06310 120 aa10.55□□□□□ -0.72
CDC42SE2-206ENST00000503291 TRAV7A0A075B6U4 112 aa10.53□□□□□ -0.72
CDC42SE2-206ENST00000503291 C5orf47Q569G3 176 aa10.53□□□□□ -0.72
CDC42SE2-206ENST00000503291 C7orf65Q6ZTY9 151 aa10.51□□□□□ -0.73
CDC42SE2-206ENST00000503291 MP68P56378 58 aa10.5□□□□□ -0.73
CDC42SE2-206ENST00000503291 LINC00208Q96KT6 92 aa10.47□□□□□ -0.73
CDC42SE2-206ENST00000503291 LOC101927531A0A1B0GV80 90 aa10.46□□□□□ -0.73
CDC42SE2-206ENST00000503291 C1orf64Q8NEQ6 169 aa10.46□□□□□ -0.74
CDC42SE2-206ENST00000503291 HRES1P13985 223 aa10.45□□□□□ -0.74
CDC42SE2-206ENST00000503291 SERP2Q8N6R1 65 aa10.45□□□□□ -0.74
CDC42SE2-206ENST00000503291 CYP4F30PQ9H0H9 118 aa10.45□□□□□ -0.74
CDC42SE2-206ENST00000503291 H3BPC8 53 aa10.41□□□□□ -0.74
CDC42SE2-206ENST00000503291 MPLKIPQ8TAP9 179 aa10.38□□□□□ -0.75
CDC42SE2-206ENST00000503291 ANAPC13Q9BS18 74 aa10.34□□□□□ -0.75
CDC42SE2-206ENST00000503291 RBM12B-AS1Q9P1G2 102 aa10.34□□□□□ -0.75
CDC42SE2-206ENST00000503291 KRTAP19-2Q3LHN2 52 aa10.34□□□□□ -0.75
CDC42SE2-206ENST00000503291 COX7CP15954 63 aa10.33□□□□□ -0.76
CDC42SE2-206ENST00000503291 A0A0U1RQV1 116 aa10.32□□□□□ -0.76
CDC42SE2-206ENST00000503291 C4orf26Q17RF5 130 aa10.31□□□□□ -0.76
CDC42SE2-206ENST00000503291 KLKP1Q107X0 134 aa10.31□□□□□ -0.76
CDC42SE2-206ENST00000503291 C20orf197Q8N268 126 aa10.31□□□□□ -0.76
CDC42SE2-206ENST00000503291 SNURFQ9Y675 71 aa10.29□□□□□ -0.76
CDC42SE2-206ENST00000503291 COX6B2Q6YFQ2 88 aa10.28□□□□□ -0.76
CDC42SE2-206ENST00000503291 FAM236DA0A1B0GTK5 79 aa10.27□□□□□ -0.77
CDC42SE2-206ENST00000503291 FAM236CP0DP71 79 aa10.27□□□□□ -0.77
CDC42SE2-206ENST00000503291 LCE2CQ5TA81 110 aa10.26□□□□□ -0.77
CDC42SE2-206ENST00000503291 FAT4Q6V0I7 4981 aa10.23□□□□□ -0.77
CDC42SE2-206ENST00000503291 KRTAP3-1Q9BYR8 98 aa10.17□□□□□ -0.78
CDC42SE2-206ENST00000503291 CCDC179H3BU77 68 aa10.12□□□□□ -0.79
CDC42SE2-206ENST00000503291 H1FX-AS1Q4G0G2 97 aa10.12□□□□□ -0.79
CDC42SE2-206ENST00000503291 CYSTM1Q9H1C7 97 aa10.09□□□□□ -0.79
CDC42SE2-206ENST00000503291 MT1HP80294 61 aa10.08□□□□□ -0.8
CDC42SE2-206ENST00000503291 FLGP20930 4061 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE2-206ENST00000503291 NDUFC1O43677 76 aa10.04□□□□□ -0.8
CDC42SE2-206ENST00000503291 A8MUN3 132 aa10.03□□□□□ -0.8
CDC42SE2-206ENST00000503291 H7BZZ5 65 aa10.02□□□□□ -0.8
CDC42SE2-206ENST00000503291 SPANXA2-OT1Q8N9U9 137 aa10.01□□□□□ -0.81
CDC42SE2-206ENST00000503291 DMAC1Q96GE9 116 aa10□□□□□ -0.81
CDC42SE2-206ENST00000503291 LCE2AQ5TA79 106 aaPredicted RBP10□□□□□ -0.81
CDC42SE2-206ENST00000503291 M0R2T5 61 aa9.96□□□□□ -0.81
CDC42SE2-206ENST00000503291 S4R3F8 94 aa9.94□□□□□ -0.82
CDC42SE2-206ENST00000503291 ACYP2P14621 99 aa9.9□□□□□ -0.82
CDC42SE2-206ENST00000503291 LCA10Q71F78 164 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms