RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 RPL37AP61513 92 aaKnown RBP3.21□□□□□ -1.9
CLDND1-208ENST00000503004 NOTCH2NLQ7Z3S9 236 aa3.21□□□□□ -1.9
CLDND1-208ENST00000503004 RETNLBQ9BQ08 111 aa3.21□□□□□ -1.9
CLDND1-208ENST00000503004 DYNC2H1Q8NCM8 4307 aaKnown RBP3.21□□□□□ -1.9
CLDND1-208ENST00000503004 KRTAP11-1Q8IUC1 163 aa3.21□□□□□ -1.9
CLDND1-208ENST00000503004 KRTAP9-2Q9BYQ4 174 aa3.2□□□□□ -1.9
CLDND1-208ENST00000503004 APLNQ9ULZ1 77 aa3.2□□□□□ -1.9
CLDND1-208ENST00000503004 DNAH2Q9P225 4427 aa3.2□□□□□ -1.9
CLDND1-208ENST00000503004 FRAS1Q86XX4 4008 aa3.2□□□□□ -1.9
CLDND1-208ENST00000503004 CNBPP62633 177 aaKnown RBP3.2□□□□□ -1.9
CLDND1-208ENST00000503004 C9orf163Q8N9P6 203 aa3.2□□□□□ -1.9
CLDND1-208ENST00000503004 KRTAP9-6A0A140TA67 174 aa3.2□□□□□ -1.9
CLDND1-208ENST00000503004 LCE2BO14633 110 aa3.2□□□□□ -1.9
CLDND1-208ENST00000503004 RTL8CO15255 209 aa3.2□□□□□ -1.9
CLDND1-208ENST00000503004 PCOTHQ58A44 107 aa3.2□□□□□ -1.9
CLDND1-208ENST00000503004 Q8NBF4 154 aa3.2□□□□□ -1.9
CLDND1-208ENST00000503004 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
CLDND1-208ENST00000503004 H0Y9P7 68 aa3.19□□□□□ -1.9
CLDND1-208ENST00000503004 Q6ZR54 194 aa3.19□□□□□ -1.9
CLDND1-208ENST00000503004 PANO1I0J062 215 aa3.19□□□□□ -1.9
CLDND1-208ENST00000503004 CSAG1Q6PB30 78 aa3.19□□□□□ -1.9
CLDND1-208ENST00000503004 VPS13DQ5THJ4 4388 aa3.19□□□□□ -1.9
CLDND1-208ENST00000503004 SPRR4Q96PI1 79 aa3.18□□□□□ -1.9
CLDND1-208ENST00000503004 IGFL1Q6UW32 110 aa3.18□□□□□ -1.9
CLDND1-208ENST00000503004 HECTD4Q9Y4D8 3996 aa3.17□□□□□ -1.9
CLDND1-208ENST00000503004 ASB16-AS1Q495Z4 193 aa3.17□□□□□ -1.9
CLDND1-208ENST00000503004 A0A087WSZ3 146 aa3.16□□□□□ -1.9
CLDND1-208ENST00000503004 NBDYA0A0U1RRE5 68 aa3.16□□□□□ -1.9
CLDND1-208ENST00000503004 C1orf134Q5TEV5 83 aa3.16□□□□□ -1.9
CLDND1-208ENST00000503004 FBN3Q75N90 2809 aa3.16□□□□□ -1.9
CLDND1-208ENST00000503004 IGLV7-46A0A075B6I9 117 aa3.16□□□□□ -1.9
CLDND1-208ENST00000503004 DNAH8Q96JB1 4490 aa3.15□□□□□ -1.9
CLDND1-208ENST00000503004 DNAH17Q9UFH2 4485 aa3.15□□□□□ -1.9
CLDND1-208ENST00000503004 A0A1B0GW54 56 aa3.15□□□□□ -1.91
CLDND1-208ENST00000503004 C14orf177Q52M58 125 aa3.15□□□□□ -1.91
CLDND1-208ENST00000503004 Q6ZRN7 208 aaPredicted RBP3.15□□□□□ -1.91
CLDND1-208ENST00000503004 WWC2-AS2Q96NR7 200 aa3.15□□□□□ -1.91
CLDND1-208ENST00000503004 H3BPC8 53 aa3.15□□□□□ -1.91
CLDND1-208ENST00000503004 LCE2AQ5TA79 106 aaPredicted RBP3.15□□□□□ -1.91
CLDND1-208ENST00000503004 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.15□□□□□ -1.91
CLDND1-208ENST00000503004 DNAH6Q9C0G6 4158 aa3.15□□□□□ -1.91
CLDND1-208ENST00000503004 KRTAP29-1A8MX34 341 aaPredicted RBP3.14□□□□□ -1.91
CLDND1-208ENST00000503004 IGHV6-1A0A0B4J1U7 121 aa3.14□□□□□ -1.91
CLDND1-208ENST00000503004 NUPR2A6NF83 97 aa3.13□□□□□ -1.91
CLDND1-208ENST00000503004 KRTAP4-5Q9BYR2 181 aa3.13□□□□□ -1.91
CLDND1-208ENST00000503004 A0A087X002 238 aa3.13□□□□□ -1.91
CLDND1-208ENST00000503004 LCE2CQ5TA81 110 aa3.13□□□□□ -1.91
CLDND1-208ENST00000503004 IGLV8-61A0A075B6I0 122 aa3.12□□□□□ -1.91
CLDND1-208ENST00000503004 HRES1P13985 223 aa3.12□□□□□ -1.91
CLDND1-208ENST00000503004 DNAH11Q96DT5 4516 aa3.12□□□□□ -1.91
CLDND1-208ENST00000503004 ROMO1P60602 79 aa3.11□□□□□ -1.91
CLDND1-208ENST00000503004 SPACA4Q8TDM5 124 aa3.11□□□□□ -1.91
CLDND1-208ENST00000503004 A0A087WTM6 91 aa3.11□□□□□ -1.91
CLDND1-208ENST00000503004 SPRR1BP22528 89 aa3.11□□□□□ -1.91
CLDND1-208ENST00000503004 KRTAP13-1Q8IUC0 172 aa3.11□□□□□ -1.91
CLDND1-208ENST00000503004 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
CLDND1-208ENST00000503004 ANAPC11Q9NYG5 84 aa3.1□□□□□ -1.91
CLDND1-208ENST00000503004 HYDINQ4G0P3 5121 aa3.09□□□□□ -1.91
CLDND1-208ENST00000503004 DNAH5Q8TE73 4624 aa3.09□□□□□ -1.91
CLDND1-208ENST00000503004 SPATA8Q6RVD6 105 aa3.09□□□□□ -1.91
CLDND1-208ENST00000503004 P0C880 135 aa3.09□□□□□ -1.92
CLDND1-208ENST00000503004 LINC00472Q9H8W2 130 aa3.09□□□□□ -1.92
CLDND1-208ENST00000503004 ALMS1Q8TCU4 4167 aa3.09□□□□□ -1.92
CLDND1-208ENST00000503004 LCE3BQ5TA77 95 aa3.08□□□□□ -1.92
CLDND1-208ENST00000503004 PSORS1C2Q9UIG4 136 aa3.08□□□□□ -1.92
CLDND1-208ENST00000503004 LRP1BQ9NZR2 4599 aa3.08□□□□□ -1.92
CLDND1-208ENST00000503004 A8MWP4 228 aa3.07□□□□□ -1.92
CLDND1-208ENST00000503004 ZNF861PO60384 105 aa3.06□□□□□ -1.92
CLDND1-208ENST00000503004 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
CLDND1-208ENST00000503004 LY6G6CO95867 125 aa3.06□□□□□ -1.92
CLDND1-208ENST00000503004 MIR22HGQ0VDD5 57 aa3.06□□□□□ -1.92
CLDND1-208ENST00000503004 FLG2Q5D862 2391 aaPredicted RBP3.06□□□□□ -1.92
CLDND1-208ENST00000503004 Q96NJ1 140 aa3.05□□□□□ -1.92
CLDND1-208ENST00000503004 FAT2Q9NYQ8 4349 aa3.04□□□□□ -1.92
CLDND1-208ENST00000503004 MMP24-AS1A0A0U1RRL7 71 aa3.04□□□□□ -1.92
CLDND1-208ENST00000503004 LINC00483Q53H64 154 aa3.04□□□□□ -1.92
CLDND1-208ENST00000503004 KRTAP25-1Q3LHN0 102 aa3.03□□□□□ -1.92
CLDND1-208ENST00000503004 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
CLDND1-208ENST00000503004 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.92
CLDND1-208ENST00000503004 PKHD1P08F94 4074 aa3.03□□□□□ -1.92
CLDND1-208ENST00000503004 KRTAP10-2P60368 255 aa3.03□□□□□ -1.92
CLDND1-208ENST00000503004 PKD1P98161 4303 aa3.03□□□□□ -1.92
CLDND1-208ENST00000503004 VPS13BQ7Z7G8 4022 aa3.02□□□□□ -1.93
CLDND1-208ENST00000503004 SPINK6Q6UWN8 80 aa3.02□□□□□ -1.93
CLDND1-208ENST00000503004 CIRBP-AS1Q8TBR5 109 aa3.01□□□□□ -1.93
CLDND1-208ENST00000503004 A0A1B0GU69 56 aa3.01□□□□□ -1.93
CLDND1-208ENST00000503004 IGLV7-43P04211 117 aa3.01□□□□□ -1.93
CLDND1-208ENST00000503004 C8orf17Q9NRJ1 99 aa3.01□□□□□ -1.93
CLDND1-208ENST00000503004 A0A1B0GVX0 72 aa3□□□□□ -1.93
CLDND1-208ENST00000503004 UQCR11O14957 56 aa3□□□□□ -1.93
CLDND1-208ENST00000503004 A8MUU9 505 aa2.99□□□□□ -1.93
CLDND1-208ENST00000503004 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
CLDND1-208ENST00000503004 LORP23490 312 aaPredicted RBP2.99□□□□□ -1.93
CLDND1-208ENST00000503004 SACSQ9NZJ4 4579 aa2.97□□□□□ -1.93
CLDND1-208ENST00000503004 KRTAP10-1P60331 282 aa2.97□□□□□ -1.93
CLDND1-208ENST00000503004 Q5W150 140 aa2.97□□□□□ -1.93
CLDND1-208ENST00000503004 MRPL34Q9BQ48 92 aaKnown RBP2.97□□□□□ -1.93
CLDND1-208ENST00000503004 TP53AIP1Q9HCN2 124 aa2.97□□□□□ -1.93
CLDND1-208ENST00000503004 CRIPTQ9P021 101 aa2.97□□□□□ -1.93
CLDND1-208ENST00000503004 FAT1Q14517 4588 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms