RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CCKP06307 115 aa2.96□□□□□ -1.94
LSM3P4-201ENST00000502948 Q8N9P0 234 aaPredicted RBP2.96□□□□□ -1.94
LSM3P4-201ENST00000502948 ZCCHC13Q8WW36 166 aaKnown RBP2.96□□□□□ -1.94
LSM3P4-201ENST00000502948 A0A1B0GW54 56 aa2.95□□□□□ -1.94
LSM3P4-201ENST00000502948 TRIAP1O43715 76 aa2.95□□□□□ -1.94
LSM3P4-201ENST00000502948 SPINK7P58062 85 aa2.95□□□□□ -1.94
LSM3P4-201ENST00000502948 C14orf144Q96I85 54 aa2.95□□□□□ -1.94
LSM3P4-201ENST00000502948 IGHV6-1A0A0B4J1U7 121 aa2.94□□□□□ -1.94
LSM3P4-201ENST00000502948 LOC100996750A0A140TA64 210 aa2.94□□□□□ -1.94
LSM3P4-201ENST00000502948 COX6CP09669 75 aa2.94□□□□□ -1.94
LSM3P4-201ENST00000502948 SPATA45Q537H7 98 aa2.94□□□□□ -1.94
LSM3P4-201ENST00000502948 KRTAP4-6Q9BYQ5 205 aa2.94□□□□□ -1.94
LSM3P4-201ENST00000502948 FXYD2P54710 66 aa2.93□□□□□ -1.94
LSM3P4-201ENST00000502948 KRTAP6-3Q3LI67 103 aa2.93□□□□□ -1.94
LSM3P4-201ENST00000502948 MACF1Q9UPN3 7388 aaKnown RBP2.93□□□□□ -1.94
LSM3P4-201ENST00000502948 S100A1P23297 94 aa2.92□□□□□ -1.94
LSM3P4-201ENST00000502948 RBM3P98179 157 aaKnown RBP2.92□□□□□ -1.94
LSM3P4-201ENST00000502948 DEFB116Q30KQ4 102 aa2.92□□□□□ -1.94
LSM3P4-201ENST00000502948 VAMP8Q9BV40 100 aa2.92□□□□□ -1.94
LSM3P4-201ENST00000502948 PAM16Q9Y3D7 125 aa2.92□□□□□ -1.94
LSM3P4-201ENST00000502948 C9orf118A6NHY6 69 aa2.91□□□□□ -1.94
LSM3P4-201ENST00000502948 NDUFB1O75438 58 aa2.91□□□□□ -1.94
LSM3P4-201ENST00000502948 Q6ZQT0 140 aa2.91□□□□□ -1.94
LSM3P4-201ENST00000502948 DSCR8Q96T75 97 aa2.91□□□□□ -1.94
LSM3P4-201ENST00000502948 PSMB2P49721 201 aa2.9□□□□□ -1.95
LSM3P4-201ENST00000502948 HSD52Q0P140 79 aa2.9□□□□□ -1.95
LSM3P4-201ENST00000502948 C9JAW5 83 aa2.89□□□□□ -1.95
LSM3P4-201ENST00000502948 WFDC13Q8IUB5 93 aa2.89□□□□□ -1.95
LSM3P4-201ENST00000502948 PDE6GP18545 87 aa2.88□□□□□ -1.95
LSM3P4-201ENST00000502948 C8orf17Q9NRJ1 99 aa2.88□□□□□ -1.95
LSM3P4-201ENST00000502948 LOC110117498A0A087WWA1 95 aa2.87□□□□□ -1.95
LSM3P4-201ENST00000502948 IGKV3D-7A0A0C4DH55 119 aa2.87□□□□□ -1.95
LSM3P4-201ENST00000502948 JMJD7-PLA2G4BH0Y9G9 81 aa2.87□□□□□ -1.95
LSM3P4-201ENST00000502948 H1FX-AS1Q4G0G2 97 aa2.87□□□□□ -1.95
LSM3P4-201ENST00000502948 A0A1B0GV72 72 aa2.86□□□□□ -1.95
LSM3P4-201ENST00000502948 Q6ZVQ6 151 aa2.86□□□□□ -1.95
LSM3P4-201ENST00000502948 VPS25Q9BRG1 176 aa2.86□□□□□ -1.95
LSM3P4-201ENST00000502948 K7ERJ3 54 aa2.85□□□□□ -1.95
LSM3P4-201ENST00000502948 BAALC-AS2P0C853 105 aa2.85□□□□□ -1.95
LSM3P4-201ENST00000502948 PRR15Q8IV56 129 aa2.85□□□□□ -1.95
LSM3P4-201ENST00000502948 TMEM254Q8TBM7 123 aa2.85□□□□□ -1.95
LSM3P4-201ENST00000502948 SCGB1C2P0DMR2 95 aa2.84□□□□□ -1.95
LSM3P4-201ENST00000502948 MRPL34Q9BQ48 92 aaKnown RBP2.84□□□□□ -1.95
LSM3P4-201ENST00000502948 UQCR10Q9UDW1 63 aa2.84□□□□□ -1.95
LSM3P4-201ENST00000502948 SYNE2Q8WXH0 6885 aaKnown RBP2.84□□□□□ -1.96
LSM3P4-201ENST00000502948 KRTAP19-4Q3LI73 84 aa2.83□□□□□ -1.96
LSM3P4-201ENST00000502948 PYY3Q5JQD4 70 aa2.83□□□□□ -1.96
LSM3P4-201ENST00000502948 LYRM7Q5U5X0 104 aa2.83□□□□□ -1.96
LSM3P4-201ENST00000502948 MMP24-AS1A0A0U1RRL7 71 aa2.82□□□□□ -1.96
LSM3P4-201ENST00000502948 ATXN8Q156A1 80 aa2.81□□□□□ -1.96
LSM3P4-201ENST00000502948 hDV103S1A0JD37 113 aa2.8□□□□□ -1.96
LSM3P4-201ENST00000502948 NREPQ16612 68 aa2.8□□□□□ -1.96
LSM3P4-201ENST00000502948 C7orf65Q6ZTY9 151 aa2.8□□□□□ -1.96
LSM3P4-201ENST00000502948 SPRR2GQ9BYE4 73 aa2.79□□□□□ -1.96
LSM3P4-201ENST00000502948 KRTAP4-8Q9BYQ9 185 aa2.79□□□□□ -1.96
LSM3P4-201ENST00000502948 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
LSM3P4-201ENST00000502948 KRTAP19-8Q3LI54 63 aa2.78□□□□□ -1.96
LSM3P4-201ENST00000502948 A6NN06 94 aa2.77□□□□□ -1.97
LSM3P4-201ENST00000502948 MT1BP07438 61 aa2.77□□□□□ -1.97
LSM3P4-201ENST00000502948 C14orf132Q9NPU4 83 aa2.77□□□□□ -1.97
LSM3P4-201ENST00000502948 K7EQZ3 153 aa2.76□□□□□ -1.97
LSM3P4-201ENST00000502948 M0R143 59 aa2.76□□□□□ -1.97
LSM3P4-201ENST00000502948 CXCL6P80162 114 aa2.76□□□□□ -1.97
LSM3P4-201ENST00000502948 Q5VV11 94 aa2.76□□□□□ -1.97
LSM3P4-201ENST00000502948 Q5W150 140 aa2.76□□□□□ -1.97
LSM3P4-201ENST00000502948 IGKV2D-30A0A075B6S6 120 aa2.75□□□□□ -1.97
LSM3P4-201ENST00000502948 NDUFS5O43920 106 aa2.75□□□□□ -1.97
LSM3P4-201ENST00000502948 IGKV2-30P06310 120 aa2.75□□□□□ -1.97
LSM3P4-201ENST00000502948 KRTAP10-5P60370 271 aa2.75□□□□□ -1.97
LSM3P4-201ENST00000502948 MUC12Q9UKN1 5478 aa2.75□□□□□ -1.97
LSM3P4-201ENST00000502948 KRTAP23-1A1A580 65 aa2.74□□□□□ -1.97
LSM3P4-201ENST00000502948 BPY2O14599 106 aa2.74□□□□□ -1.97
LSM3P4-201ENST00000502948 CSAG1Q6PB30 78 aa2.74□□□□□ -1.97
LSM3P4-201ENST00000502948 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
LSM3P4-201ENST00000502948 H3BT86 120 aa2.73□□□□□ -1.97
LSM3P4-201ENST00000502948 C4orf26Q17RF5 130 aa2.73□□□□□ -1.97
LSM3P4-201ENST00000502948 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
LSM3P4-201ENST00000502948 CRIPTQ9P021 101 aa2.73□□□□□ -1.97
LSM3P4-201ENST00000502948 FAM236AA0A1B0GUQ0 79 aa2.72□□□□□ -1.97
LSM3P4-201ENST00000502948 FAM236BA0A1B0GV22 79 aa2.72□□□□□ -1.97
LSM3P4-201ENST00000502948 CASC2Q6XLA1 102 aa2.72□□□□□ -1.97
LSM3P4-201ENST00000502948 SVIPQ8NHG7 77 aa2.72□□□□□ -1.97
LSM3P4-201ENST00000502948 KRTAP3-1Q9BYR8 98 aa2.72□□□□□ -1.97
LSM3P4-201ENST00000502948 HCG22E2RYF7 251 aa2.71□□□□□ -1.98
LSM3P4-201ENST00000502948 KLKP1Q107X0 134 aa2.71□□□□□ -1.98
LSM3P4-201ENST00000502948 C5orf47Q569G3 176 aa2.71□□□□□ -1.98
LSM3P4-201ENST00000502948 LCE3BQ5TA77 95 aa2.71□□□□□ -1.98
LSM3P4-201ENST00000502948 S4R3F8 94 aa2.71□□□□□ -1.98
LSM3P4-201ENST00000502948 NEBP20929 6669 aa2.69□□□□□ -1.98
LSM3P4-201ENST00000502948 LCA10Q71F78 164 aa2.69□□□□□ -1.98
LSM3P4-201ENST00000502948 NAA38Q9BRA0 125 aaKnown RBP2.69□□□□□ -1.98
LSM3P4-201ENST00000502948 TP53AIP1Q9HCN2 124 aa2.69□□□□□ -1.98
LSM3P4-201ENST00000502948 C1orf64Q8NEQ6 169 aa2.68□□□□□ -1.98
LSM3P4-201ENST00000502948 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
LSM3P4-201ENST00000502948 LCE4AQ5TA78 99 aa2.66□□□□□ -1.98
LSM3P4-201ENST00000502948 Q8N9L7 120 aa2.66□□□□□ -1.98
LSM3P4-201ENST00000502948 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
LSM3P4-201ENST00000502948 A0A1W2PPM0 123 aa2.65□□□□□ -1.99
LSM3P4-201ENST00000502948 H0YAA0 97 aa2.65□□□□□ -1.99
LSM3P4-201ENST00000502948 SMIM6P0DI80 62 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms