RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 Q96NJ1 140 aa8.31□□□□□ -1.08
NUP50-219ENST00000497960 ETDBQ3ZM63 59 aa8.28□□□□□ -1.08
NUP50-219ENST00000497960 LCE2BO14633 110 aa8.27□□□□□ -1.09
NUP50-219ENST00000497960 IGKV4-1P06312 121 aa8.27□□□□□ -1.09
NUP50-219ENST00000497960 DEFB116Q30KQ4 102 aa8.26□□□□□ -1.09
NUP50-219ENST00000497960 LINC00472Q9H8W2 130 aa8.25□□□□□ -1.09
NUP50-219ENST00000497960 RPL37P61927 97 aaKnown RBP8.24□□□□□ -1.09
NUP50-219ENST00000497960 NREPQ16612 68 aa8.23□□□□□ -1.09
NUP50-219ENST00000497960 J3KT08 172 aa8.21□□□□□ -1.1
NUP50-219ENST00000497960 IGHV6-1A0A0B4J1U7 121 aa8.17□□□□□ -1.1
NUP50-219ENST00000497960 DSCR10P59022 87 aa8.17□□□□□ -1.1
NUP50-219ENST00000497960 KRTAP9-2Q9BYQ4 174 aa8.16□□□□□ -1.1
NUP50-219ENST00000497960 A0A1B0GVX0 72 aa8.15□□□□□ -1.1
NUP50-219ENST00000497960 NDUFB1O75438 58 aa8.15□□□□□ -1.1
NUP50-219ENST00000497960 Q6ZVQ6 151 aa8.15□□□□□ -1.1
NUP50-219ENST00000497960 UBL5Q9BZL1 73 aa8.15□□□□□ -1.1
NUP50-219ENST00000497960 LCE2CQ5TA81 110 aa8.14□□□□□ -1.11
NUP50-219ENST00000497960 LINC00846Q9NV44 126 aa8.14□□□□□ -1.11
NUP50-219ENST00000497960 A8MWP4 228 aa8.13□□□□□ -1.11
NUP50-219ENST00000497960 LINC00313P59037 77 aa8.13□□□□□ -1.11
NUP50-219ENST00000497960 C8orf87E5RJ46 101 aa8.12□□□□□ -1.11
NUP50-219ENST00000497960 BPY2O14599 106 aa8.12□□□□□ -1.11
NUP50-219ENST00000497960 KRTAP19-2Q3LHN2 52 aa8.12□□□□□ -1.11
NUP50-219ENST00000497960 ATP11AUNQ6ZP68 121 aa8.12□□□□□ -1.11
NUP50-219ENST00000497960 Q75L30 129 aa8.12□□□□□ -1.11
NUP50-219ENST00000497960 IGKV3D-7A0A0C4DH55 119 aa8.09□□□□□ -1.11
NUP50-219ENST00000497960 K7EQZ3 153 aa8.07□□□□□ -1.12
NUP50-219ENST00000497960 COX6B2Q6YFQ2 88 aa8.07□□□□□ -1.12
NUP50-219ENST00000497960 NOTCH2NLQ7Z3S9 236 aa8.07□□□□□ -1.12
NUP50-219ENST00000497960 FAM240AA0A1B0GVK7 77 aa8.06□□□□□ -1.12
NUP50-219ENST00000497960 ACYP1P07311 99 aa8.06□□□□□ -1.12
NUP50-219ENST00000497960 MT1HP80294 61 aa8.06□□□□□ -1.12
NUP50-219ENST00000497960 PRR15Q8IV56 129 aa8.06□□□□□ -1.12
NUP50-219ENST00000497960 C8orf17Q9NRJ1 99 aa8.06□□□□□ -1.12
NUP50-219ENST00000497960 KRTAP16-1A8MUX0 517 aa8.05□□□□□ -1.12
NUP50-219ENST00000497960 C20orf166-AS1Q96NR2 134 aa8.04□□□□□ -1.12
NUP50-219ENST00000497960 A8MUU9 505 aa8.02□□□□□ -1.13
NUP50-219ENST00000497960 Q8N9L7 120 aa8.02□□□□□ -1.13
NUP50-219ENST00000497960 MMP24-AS1A0A0U1RRL7 71 aa8□□□□□ -1.13
NUP50-219ENST00000497960 J3QR89 54 aa8□□□□□ -1.13
NUP50-219ENST00000497960 CXCL6P80162 114 aa7.98□□□□□ -1.13
NUP50-219ENST00000497960 M0R2T5 61 aa7.97□□□□□ -1.13
NUP50-219ENST00000497960 hDV103S1A0JD37 113 aa7.96□□□□□ -1.14
NUP50-219ENST00000497960 TMEM254Q8TBM7 123 aa7.96□□□□□ -1.14
NUP50-219ENST00000497960 ATP5EP2Q5VTU8 51 aa7.94□□□□□ -1.14
NUP50-219ENST00000497960 WFDC13Q8IUB5 93 aa7.94□□□□□ -1.14
NUP50-219ENST00000497960 MRPL34Q9BQ48 92 aaKnown RBP7.94□□□□□ -1.14
NUP50-219ENST00000497960 CASC2Q6XLA1 102 aa7.92□□□□□ -1.14
NUP50-219ENST00000497960 Q8N9P0 234 aaPredicted RBP7.92□□□□□ -1.14
NUP50-219ENST00000497960 HCG22E2RYF7 251 aa7.91□□□□□ -1.14
NUP50-219ENST00000497960 NDUFS5O43920 106 aa7.91□□□□□ -1.14
NUP50-219ENST00000497960 KRTAP10-6P60371 365 aaPredicted RBP7.9□□□□□ -1.14
NUP50-219ENST00000497960 KRTAP9-6A0A140TA67 174 aa7.89□□□□□ -1.15
NUP50-219ENST00000497960 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
NUP50-219ENST00000497960 LINC00643Q86TS7 51 aa7.89□□□□□ -1.15
NUP50-219ENST00000497960 ZCCHC13Q8WW36 166 aaKnown RBP7.87□□□□□ -1.15
NUP50-219ENST00000497960 K7ERU9 68 aa7.86□□□□□ -1.15
NUP50-219ENST00000497960 HIST1H4AP62805 103 aaKnown RBP7.85□□□□□ -1.15
NUP50-219ENST00000497960 FLGP20930 4061 aaPredicted RBP7.82□□□□□ -1.16
NUP50-219ENST00000497960 A0A087WVE0 104 aa7.77□□□□□ -1.17
NUP50-219ENST00000497960 FAM236DA0A1B0GTK5 79 aa7.77□□□□□ -1.17
NUP50-219ENST00000497960 FAM236CP0DP71 79 aa7.77□□□□□ -1.17
NUP50-219ENST00000497960 RBM12B-AS1Q9P1G2 102 aa7.76□□□□□ -1.17
NUP50-219ENST00000497960 CRCT1Q9UGL9 99 aa7.73□□□□□ -1.17
NUP50-219ENST00000497960 HRES1P13985 223 aa7.72□□□□□ -1.17
NUP50-219ENST00000497960 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
NUP50-219ENST00000497960 SPINK7P58062 85 aa7.71□□□□□ -1.18
NUP50-219ENST00000497960 Q5W150 140 aa7.71□□□□□ -1.18
NUP50-219ENST00000497960 FSIP2Q5CZC0 6907 aa7.71□□□□□ -1.18
NUP50-219ENST00000497960 MPLKIPQ8TAP9 179 aa7.7□□□□□ -1.18
NUP50-219ENST00000497960 IGKV2D-30A0A075B6S6 120 aa7.68□□□□□ -1.18
NUP50-219ENST00000497960 IGKV2-30P06310 120 aa7.68□□□□□ -1.18
NUP50-219ENST00000497960 C7orf65Q6ZTY9 151 aa7.67□□□□□ -1.18
NUP50-219ENST00000497960 MT-ATP8P03928 68 aa7.66□□□□□ -1.18
NUP50-219ENST00000497960 IMUPQ9GZP8 106 aa7.63□□□□□ -1.19
NUP50-219ENST00000497960 TRAV22A0A0B4J277 110 aa7.62□□□□□ -1.19
NUP50-219ENST00000497960 UQCRQO14949 82 aa7.61□□□□□ -1.19
NUP50-219ENST00000497960 KRTAP9-8Q9BYQ0 159 aa7.61□□□□□ -1.19
NUP50-219ENST00000497960 SCGB1A1P11684 91 aa7.58□□□□□ -1.2
NUP50-219ENST00000497960 H0Y9P7 68 aa7.56□□□□□ -1.2
NUP50-219ENST00000497960 FAM236AA0A1B0GUQ0 79 aa7.55□□□□□ -1.2
NUP50-219ENST00000497960 FAM236BA0A1B0GV22 79 aa7.55□□□□□ -1.2
NUP50-219ENST00000497960 ATOX1O00244 68 aa7.54□□□□□ -1.2
NUP50-219ENST00000497960 OCR1Q9BZK8 76 aa7.54□□□□□ -1.2
NUP50-219ENST00000497960 LOC101927531A0A1B0GV80 90 aa7.53□□□□□ -1.2
NUP50-219ENST00000497960 MT2AP02795 61 aa7.52□□□□□ -1.21
NUP50-219ENST00000497960 MP68P56378 58 aa7.49□□□□□ -1.21
NUP50-219ENST00000497960 KRTAP10-10P60014 251 aa7.47□□□□□ -1.21
NUP50-219ENST00000497960 C4orf26Q17RF5 130 aa7.47□□□□□ -1.21
NUP50-219ENST00000497960 CYP4F30PQ9H0H9 118 aa7.47□□□□□ -1.21
NUP50-219ENST00000497960 MT1FP04733 61 aa7.46□□□□□ -1.22
NUP50-219ENST00000497960 C1orf64Q8NEQ6 169 aa7.46□□□□□ -1.22
NUP50-219ENST00000497960 LINC00208Q96KT6 92 aa7.46□□□□□ -1.22
NUP50-219ENST00000497960 C5orf47Q569G3 176 aa7.45□□□□□ -1.22
NUP50-219ENST00000497960 SMIM20Q8N5G0 67 aa7.45□□□□□ -1.22
NUP50-219ENST00000497960 TRAV7A0A075B6U4 112 aa7.41□□□□□ -1.22
NUP50-219ENST00000497960 H3BPC8 53 aa7.41□□□□□ -1.22
NUP50-219ENST00000497960 H1FX-AS1Q4G0G2 97 aa7.4□□□□□ -1.22
NUP50-219ENST00000497960 KRTAP9-3Q9BYQ3 159 aa7.38□□□□□ -1.23
NUP50-219ENST00000497960 KLKP1Q107X0 134 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms