RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 NREPQ16612 68 aa11.07□□□□□ -0.64
CTSD-206ENST00000497544 SIGMAR1Q99720 223 aa11.07□□□□□ -0.64
CTSD-206ENST00000497544 C9orf92A6NGG3 77 aa11.05□□□□□ -0.64
CTSD-206ENST00000497544 J3KT08 172 aa11.03□□□□□ -0.64
CTSD-206ENST00000497544 LINC00846Q9NV44 126 aa10.96□□□□□ -0.65
CTSD-206ENST00000497544 NDUFB1O75438 58 aa10.95□□□□□ -0.66
CTSD-206ENST00000497544 Q6ZVQ6 151 aa10.95□□□□□ -0.66
CTSD-206ENST00000497544 UBL5Q9BZL1 73 aa10.95□□□□□ -0.66
CTSD-206ENST00000497544 XP32Q5T750 250 aa10.94□□□□□ -0.66
CTSD-206ENST00000497544 IGHV6-1A0A0B4J1U7 121 aa10.92□□□□□ -0.66
CTSD-206ENST00000497544 A0A1B0GVX0 72 aa10.91□□□□□ -0.66
CTSD-206ENST00000497544 BPY2O14599 106 aa10.91□□□□□ -0.66
CTSD-206ENST00000497544 LINC00313P59037 77 aa10.91□□□□□ -0.66
CTSD-206ENST00000497544 DSCR10P59022 87 aa10.9□□□□□ -0.66
CTSD-206ENST00000497544 A8MWP4 228 aa10.89□□□□□ -0.67
CTSD-206ENST00000497544 ACYP1P07311 99 aa10.89□□□□□ -0.67
CTSD-206ENST00000497544 C8orf87E5RJ46 101 aa10.87□□□□□ -0.67
CTSD-206ENST00000497544 IGKV3D-7A0A0C4DH55 119 aa10.84□□□□□ -0.67
CTSD-206ENST00000497544 NOTCH2NLQ7Z3S9 236 aa10.84□□□□□ -0.67
CTSD-206ENST00000497544 FAM240AA0A1B0GVK7 77 aa10.83□□□□□ -0.68
CTSD-206ENST00000497544 SEC61BP60468 96 aaKnown RBP10.83□□□□□ -0.68
CTSD-206ENST00000497544 PRR15Q8IV56 129 aa10.83□□□□□ -0.68
CTSD-206ENST00000497544 MUC17Q685J3 4493 aa10.82□□□□□ -0.68
CTSD-206ENST00000497544 KRTAP9-7A8MTY7 169 aa10.8□□□□□ -0.68
CTSD-206ENST00000497544 J3QR89 54 aa10.8□□□□□ -0.68
CTSD-206ENST00000497544 RPL37P61927 97 aaKnown RBP10.79□□□□□ -0.68
CTSD-206ENST00000497544 C8orf17Q9NRJ1 99 aa10.79□□□□□ -0.68
CTSD-206ENST00000497544 K7EQZ3 153 aa10.78□□□□□ -0.68
CTSD-206ENST00000497544 Q75L30 129 aa10.77□□□□□ -0.69
CTSD-206ENST00000497544 KRTAP16-1A8MUX0 517 aa10.76□□□□□ -0.69
CTSD-206ENST00000497544 C20orf166-AS1Q96NR2 134 aa10.76□□□□□ -0.69
CTSD-206ENST00000497544 A8MUU9 505 aa10.74□□□□□ -0.69
CTSD-206ENST00000497544 Q8N9L7 120 aa10.74□□□□□ -0.69
CTSD-206ENST00000497544 PCOTHQ58A44 107 aa10.73□□□□□ -0.69
CTSD-206ENST00000497544 CXCL6P80162 114 aa10.72□□□□□ -0.69
CTSD-206ENST00000497544 ATP11AUNQ6ZP68 121 aa10.72□□□□□ -0.69
CTSD-206ENST00000497544 MMP24-AS1A0A0U1RRL7 71 aa10.69□□□□□ -0.7
CTSD-206ENST00000497544 hDV103S1A0JD37 113 aa10.67□□□□□ -0.7
CTSD-206ENST00000497544 LINC00643Q86TS7 51 aa10.66□□□□□ -0.7
CTSD-206ENST00000497544 ATP5EP2Q5VTU8 51 aa10.65□□□□□ -0.7
CTSD-206ENST00000497544 TMEM254Q8TBM7 123 aa10.65□□□□□ -0.7
CTSD-206ENST00000497544 MRPL34Q9BQ48 92 aaKnown RBP10.65□□□□□ -0.7
CTSD-206ENST00000497544 WFDC13Q8IUB5 93 aa10.63□□□□□ -0.71
CTSD-206ENST00000497544 Q8N9P0 234 aaPredicted RBP10.63□□□□□ -0.71
CTSD-206ENST00000497544 CASC2Q6XLA1 102 aa10.62□□□□□ -0.71
CTSD-206ENST00000497544 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.61□□□□□ -0.71
CTSD-206ENST00000497544 K7ERU9 68 aa10.61□□□□□ -0.71
CTSD-206ENST00000497544 HCG22E2RYF7 251 aa10.6□□□□□ -0.71
CTSD-206ENST00000497544 NDUFS5O43920 106 aa10.58□□□□□ -0.72
CTSD-206ENST00000497544 HIST1H4AP62805 103 aaKnown RBP10.56□□□□□ -0.72
CTSD-206ENST00000497544 KRTAP4-1Q9BYQ7 146 aa10.56□□□□□ -0.72
CTSD-206ENST00000497544 ZCCHC13Q8WW36 166 aaKnown RBP10.53□□□□□ -0.72
CTSD-206ENST00000497544 A0A087WVE0 104 aa10.41□□□□□ -0.74
CTSD-206ENST00000497544 TP53AIP1Q9HCN2 124 aa10.39□□□□□ -0.75
CTSD-206ENST00000497544 Q5W150 140 aa10.35□□□□□ -0.75
CTSD-206ENST00000497544 MT-ATP8P03928 68 aa10.34□□□□□ -0.75
CTSD-206ENST00000497544 SPINK7P58062 85 aa10.34□□□□□ -0.75
CTSD-206ENST00000497544 IMUPQ9GZP8 106 aa10.33□□□□□ -0.76
CTSD-206ENST00000497544 LCE2CQ5TA81 110 aa10.26□□□□□ -0.77
CTSD-206ENST00000497544 IGKV2D-30A0A075B6S6 120 aa10.25□□□□□ -0.77
CTSD-206ENST00000497544 IGKV2-30P06310 120 aa10.25□□□□□ -0.77
CTSD-206ENST00000497544 UQCRQO14949 82 aa10.24□□□□□ -0.77
CTSD-206ENST00000497544 SCGB1A1P11684 91 aa10.24□□□□□ -0.77
CTSD-206ENST00000497544 COX6B2Q6YFQ2 88 aa10.24□□□□□ -0.77
CTSD-206ENST00000497544 HRES1P13985 223 aa10.23□□□□□ -0.77
CTSD-206ENST00000497544 C7orf65Q6ZTY9 151 aa10.23□□□□□ -0.77
CTSD-206ENST00000497544 RBM12B-AS1Q9P1G2 102 aa10.22□□□□□ -0.77
CTSD-206ENST00000497544 LORP23490 312 aaPredicted RBP10.21□□□□□ -0.77
CTSD-206ENST00000497544 TRAV22A0A0B4J277 110 aa10.2□□□□□ -0.78
CTSD-206ENST00000497544 KRTAP19-2Q3LHN2 52 aa10.2□□□□□ -0.78
CTSD-206ENST00000497544 MT1HP80294 61 aa10.19□□□□□ -0.78
CTSD-206ENST00000497544 FAM236DA0A1B0GTK5 79 aa10.17□□□□□ -0.78
CTSD-206ENST00000497544 FAM236CP0DP71 79 aa10.17□□□□□ -0.78
CTSD-206ENST00000497544 KRTAP10-6P60371 365 aaPredicted RBP10.15□□□□□ -0.78
CTSD-206ENST00000497544 MPLKIPQ8TAP9 179 aa10.15□□□□□ -0.78
CTSD-206ENST00000497544 OCR1Q9BZK8 76 aa10.15□□□□□ -0.78
CTSD-206ENST00000497544 H0Y9P7 68 aa10.13□□□□□ -0.79
CTSD-206ENST00000497544 FAM236AA0A1B0GUQ0 79 aa10.12□□□□□ -0.79
CTSD-206ENST00000497544 FAM236BA0A1B0GV22 79 aa10.12□□□□□ -0.79
CTSD-206ENST00000497544 ATOX1O00244 68 aa10.12□□□□□ -0.79
CTSD-206ENST00000497544 SSPOA2VEC9 5147 aa10.12□□□□□ -0.79
CTSD-206ENST00000497544 LOC101927531A0A1B0GV80 90 aa10.09□□□□□ -0.79
CTSD-206ENST00000497544 C5orf47Q569G3 176 aa10.08□□□□□ -0.8
CTSD-206ENST00000497544 MP68P56378 58 aa10.07□□□□□ -0.8
CTSD-206ENST00000497544 CYP4F30PQ9H0H9 118 aa10.07□□□□□ -0.8
CTSD-206ENST00000497544 SMIM20Q8N5G0 67 aa10.05□□□□□ -0.8
CTSD-206ENST00000497544 C1orf64Q8NEQ6 169 aa10.04□□□□□ -0.8
CTSD-206ENST00000497544 USH2AO75445 5202 aa10.04□□□□□ -0.8
CTSD-206ENST00000497544 LINC00208Q96KT6 92 aa10.03□□□□□ -0.8
CTSD-206ENST00000497544 FCGBPQ9Y6R7 5405 aaPredicted RBP10.02□□□□□ -0.8
CTSD-206ENST00000497544 C4orf26Q17RF5 130 aa10.01□□□□□ -0.81
CTSD-206ENST00000497544 TRAV7A0A075B6U4 112 aa10□□□□□ -0.81
CTSD-206ENST00000497544 H3BPC8 53 aa9.98□□□□□ -0.81
CTSD-206ENST00000497544 M0R2T5 61 aa9.97□□□□□ -0.81
CTSD-206ENST00000497544 SYNE2Q8WXH0 6885 aaKnown RBP9.95□□□□□ -0.82
CTSD-206ENST00000497544 H1FX-AS1Q4G0G2 97 aa9.92□□□□□ -0.82
CTSD-206ENST00000497544 MACF1Q9UPN3 7388 aaKnown RBP9.88□□□□□ -0.83
CTSD-206ENST00000497544 FLGP20930 4061 aaPredicted RBP9.88□□□□□ -0.83
CTSD-206ENST00000497544 KLKP1Q107X0 134 aa9.86□□□□□ -0.83
CTSD-206ENST00000497544 SERP2Q8N6R1 65 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms