RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 SCGB1C2P0DMR2 95 aa5.89□□□□□ -1.47
VTI1A-208ENST00000494728 ORMDL1Q9P0S3 153 aa5.89□□□□□ -1.47
VTI1A-208ENST00000494728 BATFQ16520 125 aa5.88□□□□□ -1.47
VTI1A-208ENST00000494728 NAA38Q9BRA0 125 aaKnown RBP5.88□□□□□ -1.47
VTI1A-208ENST00000494728 DEFB116Q30KQ4 102 aa5.87□□□□□ -1.47
VTI1A-208ENST00000494728 IGKV4-1P06312 121 aa5.86□□□□□ -1.47
VTI1A-208ENST00000494728 TRBV7-4A0A0J9YYF1 115 aa5.85□□□□□ -1.47
VTI1A-208ENST00000494728 TRACP01848 142 aa5.85□□□□□ -1.47
VTI1A-208ENST00000494728 ANKRD29Q8N6D5 301 aa5.85□□□□□ -1.47
VTI1A-208ENST00000494728 LINC00472Q9H8W2 130 aa5.85□□□□□ -1.47
VTI1A-208ENST00000494728 MT2AP02795 61 aa5.84□□□□□ -1.47
VTI1A-208ENST00000494728 HRES1P13985 223 aa5.84□□□□□ -1.47
VTI1A-208ENST00000494728 LINC00313P59037 77 aa5.84□□□□□ -1.47
VTI1A-208ENST00000494728 MPLKIPQ8TAP9 179 aa5.84□□□□□ -1.47
VTI1A-208ENST00000494728 H3BQ85 93 aa5.83□□□□□ -1.48
VTI1A-208ENST00000494728 TMEM256-PLSCR3K7ERE1 68 aa5.83□□□□□ -1.48
VTI1A-208ENST00000494728 TRBV20-1A0A075B6N2 111 aa5.82□□□□□ -1.48
VTI1A-208ENST00000494728 CCKP06307 115 aa5.82□□□□□ -1.48
VTI1A-208ENST00000494728 IGHV6-1A0A0B4J1U7 121 aa5.81□□□□□ -1.48
VTI1A-208ENST00000494728 ATXN8Q156A1 80 aa5.81□□□□□ -1.48
VTI1A-208ENST00000494728 KRTAP4-11Q9BYQ6 195 aa5.81□□□□□ -1.48
VTI1A-208ENST00000494728 MT1FP04733 61 aa5.8□□□□□ -1.48
VTI1A-208ENST00000494728 UBE2V1Q13404 147 aa5.8□□□□□ -1.48
VTI1A-208ENST00000494728 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
VTI1A-208ENST00000494728 FAM236DA0A1B0GTK5 79 aa5.78□□□□□ -1.48
VTI1A-208ENST00000494728 BAALC-AS2P0C853 105 aa5.78□□□□□ -1.48
VTI1A-208ENST00000494728 FAM236CP0DP71 79 aa5.78□□□□□ -1.48
VTI1A-208ENST00000494728 LYRM7Q5U5X0 104 aa5.78□□□□□ -1.48
VTI1A-208ENST00000494728 VPS25Q9BRG1 176 aa5.77□□□□□ -1.49
VTI1A-208ENST00000494728 FCGBPQ9Y6R7 5405 aaPredicted RBP5.77□□□□□ -1.49
VTI1A-208ENST00000494728 A0A1B0GVX0 72 aa5.76□□□□□ -1.49
VTI1A-208ENST00000494728 LCE4AQ5TA78 99 aa5.76□□□□□ -1.49
VTI1A-208ENST00000494728 RBM3P98179 157 aaKnown RBP5.75□□□□□ -1.49
VTI1A-208ENST00000494728 DSCR8Q96T75 97 aa5.75□□□□□ -1.49
VTI1A-208ENST00000494728 C9orf118A6NHY6 69 aa5.74□□□□□ -1.49
VTI1A-208ENST00000494728 C9JAW5 83 aa5.74□□□□□ -1.49
VTI1A-208ENST00000494728 TAX1BP3O14907 124 aa5.74□□□□□ -1.49
VTI1A-208ENST00000494728 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
VTI1A-208ENST00000494728 A0A1W2PPM0 123 aa5.72□□□□□ -1.49
VTI1A-208ENST00000494728 RBM12B-AS1Q9P1G2 102 aa5.72□□□□□ -1.49
VTI1A-208ENST00000494728 KRTAP9-7A8MTY7 169 aa5.71□□□□□ -1.5
VTI1A-208ENST00000494728 C8orf87E5RJ46 101 aa5.71□□□□□ -1.5
VTI1A-208ENST00000494728 JMJD7-PLA2G4BH0Y9G9 81 aa5.7□□□□□ -1.5
VTI1A-208ENST00000494728 MTURNQ8N3F0 131 aa5.7□□□□□ -1.5
VTI1A-208ENST00000494728 ZCCHC13Q8WW36 166 aaKnown RBP5.7□□□□□ -1.5
VTI1A-208ENST00000494728 Q6ZQT0 140 aa5.69□□□□□ -1.5
VTI1A-208ENST00000494728 PCP4L1A6NKN8 68 aa5.68□□□□□ -1.5
VTI1A-208ENST00000494728 KRTAP10-10P60014 251 aa5.68□□□□□ -1.5
VTI1A-208ENST00000494728 C14orf132Q9NPU4 83 aa5.68□□□□□ -1.5
VTI1A-208ENST00000494728 SPINK7P58062 85 aa5.67□□□□□ -1.5
VTI1A-208ENST00000494728 LOC110117498A0A087WWA1 95 aa5.66□□□□□ -1.5
VTI1A-208ENST00000494728 COL5A1-AS1Q5SY13 56 aa5.66□□□□□ -1.5
VTI1A-208ENST00000494728 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
VTI1A-208ENST00000494728 SPCS1Q9Y6A9 102 aa5.66□□□□□ -1.5
VTI1A-208ENST00000494728 MACF1Q9UPN3 7388 aaKnown RBP5.65□□□□□ -1.5
VTI1A-208ENST00000494728 H3BT86 120 aa5.65□□□□□ -1.5
VTI1A-208ENST00000494728 IGKV3D-7A0A0C4DH55 119 aa5.64□□□□□ -1.51
VTI1A-208ENST00000494728 J3KT08 172 aa5.64□□□□□ -1.51
VTI1A-208ENST00000494728 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
VTI1A-208ENST00000494728 C8orf17Q9NRJ1 99 aa5.64□□□□□ -1.51
VTI1A-208ENST00000494728 PDE6GP18545 87 aa5.63□□□□□ -1.51
VTI1A-208ENST00000494728 WFDC13Q8IUB5 93 aa5.63□□□□□ -1.51
VTI1A-208ENST00000494728 A8MWP4 228 aa5.62□□□□□ -1.51
VTI1A-208ENST00000494728 C21orf62-AS1Q17RA5 79 aa5.62□□□□□ -1.51
VTI1A-208ENST00000494728 SYNE2Q8WXH0 6885 aaKnown RBP5.62□□□□□ -1.51
VTI1A-208ENST00000494728 NDUFB1O75438 58 aa5.59□□□□□ -1.51
VTI1A-208ENST00000494728 A0A1B0GW54 56 aa5.58□□□□□ -1.52
VTI1A-208ENST00000494728 K7EP34 96 aa5.58□□□□□ -1.52
VTI1A-208ENST00000494728 Q6ZVQ6 151 aa5.58□□□□□ -1.52
VTI1A-208ENST00000494728 MMP24-AS1A0A0U1RRL7 71 aa5.57□□□□□ -1.52
VTI1A-208ENST00000494728 NREPQ16612 68 aa5.56□□□□□ -1.52
VTI1A-208ENST00000494728 PRR15Q8IV56 129 aa5.56□□□□□ -1.52
VTI1A-208ENST00000494728 PRO0461Q9UI25 63 aa5.54□□□□□ -1.52
VTI1A-208ENST00000494728 K7EQZ3 153 aa5.53□□□□□ -1.52
VTI1A-208ENST00000494728 KRTAP19-6Q3LI70 58 aa5.53□□□□□ -1.52
VTI1A-208ENST00000494728 GTF2H5Q6ZYL4 71 aa5.53□□□□□ -1.52
VTI1A-208ENST00000494728 TMEM254Q8TBM7 123 aa5.52□□□□□ -1.53
VTI1A-208ENST00000494728 MRPL34Q9BQ48 92 aaKnown RBP5.52□□□□□ -1.53
VTI1A-208ENST00000494728 BPY2O14599 106 aa5.48□□□□□ -1.53
VTI1A-208ENST00000494728 Q5W150 140 aa5.48□□□□□ -1.53
VTI1A-208ENST00000494728 hDV103S1A0JD37 113 aa5.47□□□□□ -1.53
VTI1A-208ENST00000494728 F8W1H4 67 aa5.46□□□□□ -1.54
VTI1A-208ENST00000494728 NDUFS5O43920 106 aa5.46□□□□□ -1.54
VTI1A-208ENST00000494728 H1FX-AS1Q4G0G2 97 aa5.46□□□□□ -1.54
VTI1A-208ENST00000494728 Q8N9L7 120 aa5.46□□□□□ -1.54
VTI1A-208ENST00000494728 IGKV2D-30A0A075B6S6 120 aa5.45□□□□□ -1.54
VTI1A-208ENST00000494728 IGKV2-30P06310 120 aa5.45□□□□□ -1.54
VTI1A-208ENST00000494728 ETDBQ3ZM63 59 aa5.45□□□□□ -1.54
VTI1A-208ENST00000494728 LINC00846Q9NV44 126 aa5.44□□□□□ -1.54
VTI1A-208ENST00000494728 UBL5Q9BZL1 73 aa5.43□□□□□ -1.54
VTI1A-208ENST00000494728 C7orf65Q6ZTY9 151 aa5.41□□□□□ -1.54
VTI1A-208ENST00000494728 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
VTI1A-208ENST00000494728 HCG22E2RYF7 251 aa5.38□□□□□ -1.55
VTI1A-208ENST00000494728 C4orf26Q17RF5 130 aa5.38□□□□□ -1.55
VTI1A-208ENST00000494728 CASC2Q6XLA1 102 aa5.37□□□□□ -1.55
VTI1A-208ENST00000494728 A0A1B0GV90 55 aa5.35□□□□□ -1.55
VTI1A-208ENST00000494728 KRTAP3-1Q9BYR8 98 aa5.35□□□□□ -1.55
VTI1A-208ENST00000494728 CXCL6P80162 114 aa5.31□□□□□ -1.56
VTI1A-208ENST00000494728 KRTAP6-3Q3LI67 103 aa5.31□□□□□ -1.56
VTI1A-208ENST00000494728 C5orf47Q569G3 176 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms