RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 PSMB2P49721 201 aa4.4□□□□□ -1.71
LRCH3-219ENST00000494069 KRTAP16-1A8MUX0 517 aa4.38□□□□□ -1.71
LRCH3-219ENST00000494069 DEFB116Q30KQ4 102 aa4.38□□□□□ -1.71
LRCH3-219ENST00000494069 NOTCH2NLQ7Z3S9 236 aa4.38□□□□□ -1.71
LRCH3-219ENST00000494069 ANKRD29Q8N6D5 301 aa4.38□□□□□ -1.71
LRCH3-219ENST00000494069 SIGMAR1Q99720 223 aa4.38□□□□□ -1.71
LRCH3-219ENST00000494069 ORMDL1Q9P0S3 153 aa4.38□□□□□ -1.71
LRCH3-219ENST00000494069 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
LRCH3-219ENST00000494069 DNAL4O96015 105 aa4.37□□□□□ -1.71
LRCH3-219ENST00000494069 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
LRCH3-219ENST00000494069 USH2AO75445 5202 aa4.36□□□□□ -1.71
LRCH3-219ENST00000494069 TRBV7-4A0A0J9YYF1 115 aa4.36□□□□□ -1.71
LRCH3-219ENST00000494069 IGKV4-1P06312 121 aa4.36□□□□□ -1.71
LRCH3-219ENST00000494069 UQCR10Q9UDW1 63 aa4.36□□□□□ -1.71
LRCH3-219ENST00000494069 LOC105371267A0A1B0GV96 52 aa4.35□□□□□ -1.71
LRCH3-219ENST00000494069 TMEM256-PLSCR3K7ERE1 68 aa4.35□□□□□ -1.71
LRCH3-219ENST00000494069 SMIM6P0DI80 62 aa4.35□□□□□ -1.71
LRCH3-219ENST00000494069 LINC00313P59037 77 aa4.35□□□□□ -1.71
LRCH3-219ENST00000494069 LINC00472Q9H8W2 130 aa4.35□□□□□ -1.71
LRCH3-219ENST00000494069 CCKP06307 115 aa4.34□□□□□ -1.71
LRCH3-219ENST00000494069 COX6CP09669 75 aa4.34□□□□□ -1.71
LRCH3-219ENST00000494069 H3BQ85 93 aa4.33□□□□□ -1.72
LRCH3-219ENST00000494069 TRACP01848 142 aa4.33□□□□□ -1.72
LRCH3-219ENST00000494069 UBE2V1Q13404 147 aa4.33□□□□□ -1.72
LRCH3-219ENST00000494069 SSPOA2VEC9 5147 aa4.32□□□□□ -1.72
LRCH3-219ENST00000494069 IGHV6-1A0A0B4J1U7 121 aa4.32□□□□□ -1.72
LRCH3-219ENST00000494069 SCGB1C2P0DMR2 95 aa4.32□□□□□ -1.72
LRCH3-219ENST00000494069 VPS25Q9BRG1 176 aa4.32□□□□□ -1.72
LRCH3-219ENST00000494069 TRBV20-1A0A075B6N2 111 aa4.31□□□□□ -1.72
LRCH3-219ENST00000494069 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
LRCH3-219ENST00000494069 BAALC-AS2P0C853 105 aa4.3□□□□□ -1.72
LRCH3-219ENST00000494069 NAA38Q9BRA0 125 aaKnown RBP4.3□□□□□ -1.72
LRCH3-219ENST00000494069 HRES1P13985 223 aa4.29□□□□□ -1.72
LRCH3-219ENST00000494069 RBM3P98179 157 aaKnown RBP4.29□□□□□ -1.72
LRCH3-219ENST00000494069 A0A1B0GVX0 72 aa4.28□□□□□ -1.72
LRCH3-219ENST00000494069 MPLKIPQ8TAP9 179 aa4.28□□□□□ -1.72
LRCH3-219ENST00000494069 DSCR8Q96T75 97 aa4.28□□□□□ -1.72
LRCH3-219ENST00000494069 TSTD3H0UI37 97 aa4.27□□□□□ -1.73
LRCH3-219ENST00000494069 FAM236DA0A1B0GTK5 79 aa4.26□□□□□ -1.73
LRCH3-219ENST00000494069 C9JAW5 83 aa4.26□□□□□ -1.73
LRCH3-219ENST00000494069 FAM236CP0DP71 79 aa4.26□□□□□ -1.73
LRCH3-219ENST00000494069 C8orf87E5RJ46 101 aa4.25□□□□□ -1.73
LRCH3-219ENST00000494069 Q6ZQT0 140 aa4.25□□□□□ -1.73
LRCH3-219ENST00000494069 MT2AP02795 61 aa4.24□□□□□ -1.73
LRCH3-219ENST00000494069 ATXN8Q156A1 80 aa4.23□□□□□ -1.73
LRCH3-219ENST00000494069 RBM12B-AS1Q9P1G2 102 aa4.23□□□□□ -1.73
LRCH3-219ENST00000494069 J3KT08 172 aa4.22□□□□□ -1.73
LRCH3-219ENST00000494069 M0R143 59 aa4.22□□□□□ -1.73
LRCH3-219ENST00000494069 MT1FP04733 61 aa4.22□□□□□ -1.73
LRCH3-219ENST00000494069 ZCCHC13Q8WW36 166 aaKnown RBP4.22□□□□□ -1.73
LRCH3-219ENST00000494069 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.74
LRCH3-219ENST00000494069 LOC110117498A0A087WWA1 95 aa4.21□□□□□ -1.74
LRCH3-219ENST00000494069 IGKV3D-7A0A0C4DH55 119 aa4.21□□□□□ -1.74
LRCH3-219ENST00000494069 SPINK7P58062 85 aa4.21□□□□□ -1.74
LRCH3-219ENST00000494069 C14orf132Q9NPU4 83 aa4.21□□□□□ -1.74
LRCH3-219ENST00000494069 JMJD7-PLA2G4BH0Y9G9 81 aa4.2□□□□□ -1.74
LRCH3-219ENST00000494069 Q8N9P0 234 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-219ENST00000494069 C8orf17Q9NRJ1 99 aa4.2□□□□□ -1.74
LRCH3-219ENST00000494069 A8MWP4 228 aa4.19□□□□□ -1.74
LRCH3-219ENST00000494069 NDUFB1O75438 58 aa4.18□□□□□ -1.74
LRCH3-219ENST00000494069 BATFQ16520 125 aa4.18□□□□□ -1.74
LRCH3-219ENST00000494069 KRTAP10-10P60014 251 aa4.17□□□□□ -1.74
LRCH3-219ENST00000494069 LYRM7Q5U5X0 104 aa4.16□□□□□ -1.74
LRCH3-219ENST00000494069 Q6ZVQ6 151 aa4.16□□□□□ -1.74
LRCH3-219ENST00000494069 MTURNQ8N3F0 131 aa4.16□□□□□ -1.74
LRCH3-219ENST00000494069 A0A1B0GW54 56 aa4.15□□□□□ -1.75
LRCH3-219ENST00000494069 PDE6GP18545 87 aa4.15□□□□□ -1.75
LRCH3-219ENST00000494069 NREPQ16612 68 aa4.15□□□□□ -1.75
LRCH3-219ENST00000494069 PRR15Q8IV56 129 aa4.15□□□□□ -1.75
LRCH3-219ENST00000494069 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.75
LRCH3-219ENST00000494069 MMP24-AS1A0A0U1RRL7 71 aa4.14□□□□□ -1.75
LRCH3-219ENST00000494069 WFDC13Q8IUB5 93 aa4.14□□□□□ -1.75
LRCH3-219ENST00000494069 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
LRCH3-219ENST00000494069 PCP4L1A6NKN8 68 aa4.12□□□□□ -1.75
LRCH3-219ENST00000494069 K7EQZ3 153 aa4.12□□□□□ -1.75
LRCH3-219ENST00000494069 TAX1BP3O14907 124 aa4.12□□□□□ -1.75
LRCH3-219ENST00000494069 MRPL34Q9BQ48 92 aaKnown RBP4.12□□□□□ -1.75
LRCH3-219ENST00000494069 A0A1W2PPM0 123 aa4.1□□□□□ -1.75
LRCH3-219ENST00000494069 H3BT86 120 aa4.1□□□□□ -1.75
LRCH3-219ENST00000494069 COL5A1-AS1Q5SY13 56 aa4.1□□□□□ -1.75
LRCH3-219ENST00000494069 TMEM254Q8TBM7 123 aa4.1□□□□□ -1.75
LRCH3-219ENST00000494069 hDV103S1A0JD37 113 aa4.09□□□□□ -1.75
LRCH3-219ENST00000494069 NDUFS5O43920 106 aa4.08□□□□□ -1.76
LRCH3-219ENST00000494069 Q5W150 140 aa4.08□□□□□ -1.76
LRCH3-219ENST00000494069 Q8N9L7 120 aa4.08□□□□□ -1.76
LRCH3-219ENST00000494069 BPY2O14599 106 aa4.07□□□□□ -1.76
LRCH3-219ENST00000494069 IGKV2D-30A0A075B6S6 120 aa4.05□□□□□ -1.76
LRCH3-219ENST00000494069 IGKV2-30P06310 120 aa4.05□□□□□ -1.76
LRCH3-219ENST00000494069 SPCS1Q9Y6A9 102 aa4.05□□□□□ -1.76
LRCH3-219ENST00000494069 H1FX-AS1Q4G0G2 97 aa4.04□□□□□ -1.76
LRCH3-219ENST00000494069 HCG22E2RYF7 251 aa4.02□□□□□ -1.77
LRCH3-219ENST00000494069 CASC2Q6XLA1 102 aa4.02□□□□□ -1.77
LRCH3-219ENST00000494069 C7orf65Q6ZTY9 151 aa4.01□□□□□ -1.77
LRCH3-219ENST00000494069 LINC00846Q9NV44 126 aa4.01□□□□□ -1.77
LRCH3-219ENST00000494069 PRO0461Q9UI25 63 aa4.01□□□□□ -1.77
LRCH3-219ENST00000494069 C4orf26Q17RF5 130 aa4□□□□□ -1.77
LRCH3-219ENST00000494069 KRTAP19-6Q3LI70 58 aa4□□□□□ -1.77
LRCH3-219ENST00000494069 GTF2H5Q6ZYL4 71 aa4□□□□□ -1.77
LRCH3-219ENST00000494069 K7EP34 96 aa3.98□□□□□ -1.77
LRCH3-219ENST00000494069 UBL5Q9BZL1 73 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms