RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 KRTAP13-3Q3SY46 172 aa4.22□□□□□ -1.73
VEGFA-214ENST00000493786 Q96NJ1 140 aa4.22□□□□□ -1.73
VEGFA-214ENST00000493786 UBL5Q9BZL1 73 aa4.22□□□□□ -1.73
VEGFA-214ENST00000493786 LINC00472Q9H8W2 130 aa4.22□□□□□ -1.73
VEGFA-214ENST00000493786 LRP2P98164 4655 aa4.21□□□□□ -1.74
VEGFA-214ENST00000493786 NDUFB1O75438 58 aa4.21□□□□□ -1.74
VEGFA-214ENST00000493786 IGHV6-1A0A0B4J1U7 121 aa4.19□□□□□ -1.74
VEGFA-214ENST00000493786 BPY2O14599 106 aa4.19□□□□□ -1.74
VEGFA-214ENST00000493786 Q6ZVQ6 151 aa4.19□□□□□ -1.74
VEGFA-214ENST00000493786 ACYP1P07311 99 aa4.18□□□□□ -1.74
VEGFA-214ENST00000493786 LINC00846Q9NV44 126 aa4.18□□□□□ -1.74
VEGFA-214ENST00000493786 A0A1B0GVX0 72 aa4.17□□□□□ -1.74
VEGFA-214ENST00000493786 A8MWP4 228 aa4.17□□□□□ -1.74
VEGFA-214ENST00000493786 C8orf87E5RJ46 101 aa4.17□□□□□ -1.74
VEGFA-214ENST00000493786 LINC00313P59037 77 aa4.17□□□□□ -1.74
VEGFA-214ENST00000493786 XP32Q5T750 250 aa4.17□□□□□ -1.74
VEGFA-214ENST00000493786 LPAP08519 4548 aa4.17□□□□□ -1.74
VEGFA-214ENST00000493786 FAM240AA0A1B0GVK7 77 aa4.16□□□□□ -1.74
VEGFA-214ENST00000493786 DSCR10P59022 87 aa4.16□□□□□ -1.74
VEGFA-214ENST00000493786 UBR4Q5T4S7 5183 aa4.15□□□□□ -1.74
VEGFA-214ENST00000493786 SEC61BP60468 96 aaKnown RBP4.15□□□□□ -1.75
VEGFA-214ENST00000493786 IGKV3D-7A0A0C4DH55 119 aa4.14□□□□□ -1.75
VEGFA-214ENST00000493786 K7EQZ3 153 aa4.13□□□□□ -1.75
VEGFA-214ENST00000493786 PRR15Q8IV56 129 aa4.13□□□□□ -1.75
VEGFA-214ENST00000493786 ANAPC13Q9BS18 74 aa4.13□□□□□ -1.75
VEGFA-214ENST00000493786 MT-ATP8P03928 68 aa4.12□□□□□ -1.75
VEGFA-214ENST00000493786 RPL37P61927 97 aaKnown RBP4.12□□□□□ -1.75
VEGFA-214ENST00000493786 Q75L30 129 aa4.12□□□□□ -1.75
VEGFA-214ENST00000493786 C8orf17Q9NRJ1 99 aa4.12□□□□□ -1.75
VEGFA-214ENST00000493786 CXCL6P80162 114 aa4.11□□□□□ -1.75
VEGFA-214ENST00000493786 ATP5EP2Q5VTU8 51 aa4.11□□□□□ -1.75
VEGFA-214ENST00000493786 ATP11AUNQ6ZP68 121 aa4.11□□□□□ -1.75
VEGFA-214ENST00000493786 RNF213Q63HN8 5207 aa4.11□□□□□ -1.75
VEGFA-214ENST00000493786 NOTCH2NLQ7Z3S9 236 aa4.1□□□□□ -1.75
VEGFA-214ENST00000493786 Q8N9L7 120 aa4.1□□□□□ -1.75
VEGFA-214ENST00000493786 C20orf166-AS1Q96NR2 134 aa4.1□□□□□ -1.75
VEGFA-214ENST00000493786 hDV103S1A0JD37 113 aa4.09□□□□□ -1.75
VEGFA-214ENST00000493786 A8MUU9 505 aa4.09□□□□□ -1.75
VEGFA-214ENST00000493786 KRTAP16-1A8MUX0 517 aa4.09□□□□□ -1.75
VEGFA-214ENST00000493786 PCOTHQ58A44 107 aa4.09□□□□□ -1.75
VEGFA-214ENST00000493786 MMP24-AS1A0A0U1RRL7 71 aa4.08□□□□□ -1.76
VEGFA-214ENST00000493786 CASC2Q6XLA1 102 aa4.08□□□□□ -1.76
VEGFA-214ENST00000493786 LINC00643Q86TS7 51 aa4.08□□□□□ -1.76
VEGFA-214ENST00000493786 TMEM254Q8TBM7 123 aa4.08□□□□□ -1.76
VEGFA-214ENST00000493786 HCG22E2RYF7 251 aa4.07□□□□□ -1.76
VEGFA-214ENST00000493786 NDUFS5O43920 106 aa4.07□□□□□ -1.76
VEGFA-214ENST00000493786 WFDC13Q8IUB5 93 aa4.07□□□□□ -1.76
VEGFA-214ENST00000493786 MRPL34Q9BQ48 92 aaKnown RBP4.07□□□□□ -1.76
VEGFA-214ENST00000493786 HIST1H4AP62805 103 aaKnown RBP4.06□□□□□ -1.76
VEGFA-214ENST00000493786 Q8N9P0 234 aaPredicted RBP4.05□□□□□ -1.76
VEGFA-214ENST00000493786 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
VEGFA-214ENST00000493786 SMIM20Q8N5G0 67 aa4.04□□□□□ -1.76
VEGFA-214ENST00000493786 A0A0U1RQV1 116 aa4.03□□□□□ -1.76
VEGFA-214ENST00000493786 CCDC179H3BU77 68 aa4.03□□□□□ -1.76
VEGFA-214ENST00000493786 ZCCHC13Q8WW36 166 aaKnown RBP4.03□□□□□ -1.76
VEGFA-214ENST00000493786 TP53AIP1Q9HCN2 124 aa3.99□□□□□ -1.77
VEGFA-214ENST00000493786 MUC2Q02817 5179 aa3.98□□□□□ -1.77
VEGFA-214ENST00000493786 A0A087WVE0 104 aa3.98□□□□□ -1.77
VEGFA-214ENST00000493786 C5orf47Q569G3 176 aa3.98□□□□□ -1.77
VEGFA-214ENST00000493786 KRTAP4-1Q9BYQ7 146 aa3.98□□□□□ -1.77
VEGFA-214ENST00000493786 IMUPQ9GZP8 106 aa3.98□□□□□ -1.77
VEGFA-214ENST00000493786 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
VEGFA-214ENST00000493786 COX6B2Q6YFQ2 88 aa3.95□□□□□ -1.78
VEGFA-214ENST00000493786 UQCRQO14949 82 aa3.94□□□□□ -1.78
VEGFA-214ENST00000493786 SPINK7P58062 85 aa3.94□□□□□ -1.78
VEGFA-214ENST00000493786 IGKV2D-30A0A075B6S6 120 aa3.93□□□□□ -1.78
VEGFA-214ENST00000493786 IGKV2-30P06310 120 aa3.93□□□□□ -1.78
VEGFA-214ENST00000493786 Q5W150 140 aa3.93□□□□□ -1.78
VEGFA-214ENST00000493786 C7orf65Q6ZTY9 151 aa3.93□□□□□ -1.78
VEGFA-214ENST00000493786 RBM12B-AS1Q9P1G2 102 aa3.93□□□□□ -1.78
VEGFA-214ENST00000493786 TRAV22A0A0B4J277 110 aa3.92□□□□□ -1.78
VEGFA-214ENST00000493786 FAM236DA0A1B0GTK5 79 aa3.92□□□□□ -1.78
VEGFA-214ENST00000493786 FAM236CP0DP71 79 aa3.92□□□□□ -1.78
VEGFA-214ENST00000493786 FAT4Q6V0I7 4981 aa3.91□□□□□ -1.78
VEGFA-214ENST00000493786 FAM236AA0A1B0GUQ0 79 aa3.91□□□□□ -1.78
VEGFA-214ENST00000493786 FAM236BA0A1B0GV22 79 aa3.91□□□□□ -1.78
VEGFA-214ENST00000493786 ATOX1O00244 68 aa3.91□□□□□ -1.78
VEGFA-214ENST00000493786 COX7CP15954 63 aa3.91□□□□□ -1.78
VEGFA-214ENST00000493786 H0Y9P7 68 aa3.89□□□□□ -1.79
VEGFA-214ENST00000493786 HRES1P13985 223 aa3.89□□□□□ -1.79
VEGFA-214ENST00000493786 MP68P56378 58 aa3.89□□□□□ -1.79
VEGFA-214ENST00000493786 LOC101927531A0A1B0GV80 90 aa3.88□□□□□ -1.79
VEGFA-214ENST00000493786 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
VEGFA-214ENST00000493786 TMEM258P61165 79 aa3.87□□□□□ -1.79
VEGFA-214ENST00000493786 KRTAP4-6Q9BYQ5 205 aa3.87□□□□□ -1.79
VEGFA-214ENST00000493786 OCR1Q9BZK8 76 aa3.87□□□□□ -1.79
VEGFA-214ENST00000493786 H3BS24 57 aa3.86□□□□□ -1.79
VEGFA-214ENST00000493786 MPLKIPQ8TAP9 179 aa3.85□□□□□ -1.79
VEGFA-214ENST00000493786 H3BPC8 53 aa3.84□□□□□ -1.79
VEGFA-214ENST00000493786 KRTAP19-2Q3LHN2 52 aa3.84□□□□□ -1.79
VEGFA-214ENST00000493786 SERP2Q8N6R1 65 aa3.84□□□□□ -1.79
VEGFA-214ENST00000493786 C1orf64Q8NEQ6 169 aa3.84□□□□□ -1.79
VEGFA-214ENST00000493786 LINC00208Q96KT6 92 aa3.84□□□□□ -1.79
VEGFA-214ENST00000493786 CYP4F30PQ9H0H9 118 aa3.84□□□□□ -1.79
VEGFA-214ENST00000493786 TRAV7A0A075B6U4 112 aa3.83□□□□□ -1.8
VEGFA-214ENST00000493786 M0R2T5 61 aa3.83□□□□□ -1.8
VEGFA-214ENST00000493786 C4orf26Q17RF5 130 aa3.82□□□□□ -1.8
VEGFA-214ENST00000493786 MT1HP80294 61 aa3.8□□□□□ -1.8
VEGFA-214ENST00000493786 H1FX-AS1Q4G0G2 97 aa3.79□□□□□ -1.8
VEGFA-214ENST00000493786 FLGP20930 4061 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms