RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SNAPC5O75971 98 aa-0.17□□□□□ -2.44
ITGB1-216ENST00000493758 UQCRHP07919 91 aa-0.17□□□□□ -2.44
ITGB1-216ENST00000493758 DEFB110Q30KQ9 67 aa-0.17□□□□□ -2.44
ITGB1-216ENST00000493758 RPL13AP3Q6NVV1 102 aa-0.17□□□□□ -2.44
ITGB1-216ENST00000493758 NXT2Q9NPJ8 142 aaKnown RBP-0.17□□□□□ -2.44
ITGB1-216ENST00000493758 UBE2L5PA0A1B0GUS4 154 aa-0.18□□□□□ -2.44
ITGB1-216ENST00000493758 FAM24AA6NFZ4 105 aa-0.18□□□□□ -2.44
ITGB1-216ENST00000493758 OOSP1A8MZH6 123 aa-0.18□□□□□ -2.44
ITGB1-216ENST00000493758 K7EQZ3 153 aa-0.18□□□□□ -2.44
ITGB1-216ENST00000493758 PRM1P04553 51 aa-0.18□□□□□ -2.44
ITGB1-216ENST00000493758 ATP5EP56381 51 aaPredicted RBP-0.18□□□□□ -2.44
ITGB1-216ENST00000493758 RPS29P62273 56 aaKnown RBP-0.18□□□□□ -2.44
ITGB1-216ENST00000493758 UBE2L3P68036 154 aaKnown RBP-0.18□□□□□ -2.44
ITGB1-216ENST00000493758 WHAMMP3Q1A5X7 153 aa-0.18□□□□□ -2.44
ITGB1-216ENST00000493758 TMEM263Q8WUH6 116 aaKnown RBP-0.18□□□□□ -2.44
ITGB1-216ENST00000493758 LINC00474Q9P2X8 69 aa-0.18□□□□□ -2.44
ITGB1-216ENST00000493758 C20orf202A1L168 122 aa-0.19□□□□□ -2.44
ITGB1-216ENST00000493758 F6UZH7 168 aa-0.19□□□□□ -2.44
ITGB1-216ENST00000493758 IGLC1P0CG04 106 aa-0.19□□□□□ -2.44
ITGB1-216ENST00000493758 SPRR1BP22528 89 aa-0.19□□□□□ -2.44
ITGB1-216ENST00000493758 GNG11P61952 73 aa-0.19□□□□□ -2.44
ITGB1-216ENST00000493758 ARL2-SNX15V9GYD0 113 aa-0.19□□□□□ -2.44
ITGB1-216ENST00000493758 EFCAB10A6NFE3 127 aa-0.2□□□□□ -2.44
ITGB1-216ENST00000493758 HTN3P15516 51 aa-0.2□□□□□ -2.44
ITGB1-216ENST00000493758 FAM223AQ8IWN6 122 aa-0.2□□□□□ -2.44
ITGB1-216ENST00000493758 SVBPQ8N300 66 aa-0.2□□□□□ -2.44
ITGB1-216ENST00000493758 TTTY10Q9BZA0 68 aa-0.2□□□□□ -2.44
ITGB1-216ENST00000493758 FXYD6Q9H0Q3 95 aa-0.2□□□□□ -2.44
ITGB1-216ENST00000493758 CDC42SE2Q9NRR3 84 aa-0.2□□□□□ -2.44
ITGB1-216ENST00000493758 TRBV7-4A0A0J9YYF1 115 aa-0.21□□□□□ -2.44
ITGB1-216ENST00000493758 SPINK4O60575 86 aa-0.21□□□□□ -2.44
ITGB1-216ENST00000493758 COX6CP09669 75 aa-0.21□□□□□ -2.44
ITGB1-216ENST00000493758 TRAPPC2P0DI81 140 aa-0.21□□□□□ -2.44
ITGB1-216ENST00000493758 TRAPPC2BP0DI82 140 aa-0.21□□□□□ -2.44
ITGB1-216ENST00000493758 C10orf113Q5VZT2 155 aa-0.21□□□□□ -2.44
ITGB1-216ENST00000493758 FAM167A-AS1Q96KT0 104 aa-0.21□□□□□ -2.44
ITGB1-216ENST00000493758 SPRR4Q96PI1 79 aa-0.21□□□□□ -2.44
ITGB1-216ENST00000493758 PRO1933Q9H354 126 aa-0.21□□□□□ -2.44
ITGB1-216ENST00000493758 MANBALQ9NQG1 85 aa-0.21□□□□□ -2.44
ITGB1-216ENST00000493758 NAP1L6A6NFF2 107 aa-0.22□□□□□ -2.44
ITGB1-216ENST00000493758 C9orf92A6NGG3 77 aa-0.22□□□□□ -2.44
ITGB1-216ENST00000493758 DLEU1O43261 78 aa-0.22□□□□□ -2.44
ITGB1-216ENST00000493758 GNG4P50150 75 aa-0.22□□□□□ -2.44
ITGB1-216ENST00000493758 IER3IP1Q9Y5U9 82 aa-0.22□□□□□ -2.44
ITGB1-216ENST00000493758 A0A1B0GV90 55 aa-0.23□□□□□ -2.45
ITGB1-216ENST00000493758 A0A1B0GWA3 101 aa-0.23□□□□□ -2.45
ITGB1-216ENST00000493758 SYS1-DBNDD2H3BUS1 97 aa-0.23□□□□□ -2.45
ITGB1-216ENST00000493758 PPP3R1P63098 170 aa-0.23□□□□□ -2.45
ITGB1-216ENST00000493758 Q0VG73 95 aa-0.23□□□□□ -2.45
ITGB1-216ENST00000493758 DEFB114Q30KQ6 69 aa-0.23□□□□□ -2.45
ITGB1-216ENST00000493758 WFDC10BQ8IUB3 73 aa-0.23□□□□□ -2.45
ITGB1-216ENST00000493758 COX14Q96I36 57 aa-0.23□□□□□ -2.45
ITGB1-216ENST00000493758 S100A1P23297 94 aa-0.24□□□□□ -2.45
ITGB1-216ENST00000493758 SARNPP82979 210 aaKnown RBP-0.24□□□□□ -2.45
ITGB1-216ENST00000493758 SFTA2Q6UW10 78 aa-0.24□□□□□ -2.45
ITGB1-216ENST00000493758 USMG5Q96IX5 58 aa-0.24□□□□□ -2.45
ITGB1-216ENST00000493758 C12orf57Q99622 126 aa-0.24□□□□□ -2.45
ITGB1-216ENST00000493758 PRO1854Q9UHT4 67 aa-0.24□□□□□ -2.45
ITGB1-216ENST00000493758 GNG8Q9UK08 70 aa-0.24□□□□□ -2.45
ITGB1-216ENST00000493758 A0A096LPF7 62 aa-0.25□□□□□ -2.45
ITGB1-216ENST00000493758 LINC00959A0A1B0GUT2 108 aa-0.25□□□□□ -2.45
ITGB1-216ENST00000493758 FAM223BA6NKX1 122 aa-0.25□□□□□ -2.45
ITGB1-216ENST00000493758 CORTO00230 105 aa-0.25□□□□□ -2.45
ITGB1-216ENST00000493758 SPART-AS1P0CW21 52 aa-0.25□□□□□ -2.45
ITGB1-216ENST00000493758 COX8AP10176 69 aa-0.25□□□□□ -2.45
ITGB1-216ENST00000493758 UBE2D3P61077 147 aa-0.25□□□□□ -2.45
ITGB1-216ENST00000493758 UBE2D2P62837 147 aa-0.25□□□□□ -2.45
ITGB1-216ENST00000493758 TMEM203Q969S6 136 aa-0.25□□□□□ -2.45
ITGB1-216ENST00000493758 CRYM-AS1A6NIL9 109 aa-0.26□□□□□ -2.45
ITGB1-216ENST00000493758 H3BQ15 152 aa-0.26□□□□□ -2.45
ITGB1-216ENST00000493758 SAA2P0DJI9 122 aaPredicted RBP-0.26□□□□□ -2.45
ITGB1-216ENST00000493758 KRTDAPP60985 99 aa-0.26□□□□□ -2.45
ITGB1-216ENST00000493758 MRPS10P82664 201 aaKnown RBP-0.26□□□□□ -2.45
ITGB1-216ENST00000493758 TDRG1Q3Y452 100 aa-0.26□□□□□ -2.45
ITGB1-216ENST00000493758 LINC01556Q5JQF7 62 aa-0.26□□□□□ -2.45
ITGB1-216ENST00000493758 RPS27LQ71UM5 84 aaKnown RBP-0.26□□□□□ -2.45
ITGB1-216ENST00000493758 DEFB105AQ8NG35 78 aa-0.26□□□□□ -2.45
ITGB1-216ENST00000493758 UBE2D4Q9Y2X8 147 aa-0.26□□□□□ -2.45
ITGB1-216ENST00000493758 APELAP0DMC3 54 aa-0.27□□□□□ -2.45
ITGB1-216ENST00000493758 SNCAP37840 140 aa-0.27□□□□□ -2.45
ITGB1-216ENST00000493758 SEC11AP67812 179 aa-0.27□□□□□ -2.45
ITGB1-216ENST00000493758 DEFA5Q01523 94 aa-0.27□□□□□ -2.45
ITGB1-216ENST00000493758 GTF2H5Q6ZYL4 71 aa-0.27□□□□□ -2.45
ITGB1-216ENST00000493758 LCN9Q8WX39 176 aa-0.27□□□□□ -2.45
ITGB1-216ENST00000493758 LEAP2Q969E1 77 aa-0.27□□□□□ -2.45
ITGB1-216ENST00000493758 C2orf88Q9BSF0 95 aa-0.27□□□□□ -2.45
ITGB1-216ENST00000493758 HILPDAQ9Y5L2 63 aa-0.27□□□□□ -2.45
ITGB1-216ENST00000493758 A0A096LNI7 61 aa-0.28□□□□□ -2.45
ITGB1-216ENST00000493758 UQCRHLA0A096LP55 91 aa-0.28□□□□□ -2.45
ITGB1-216ENST00000493758 H0YGG7 62 aa-0.28□□□□□ -2.45
ITGB1-216ENST00000493758 KLK9Q2XQG4 91 aa-0.28□□□□□ -2.45
ITGB1-216ENST00000493758 VAMP8Q9BV40 100 aa-0.28□□□□□ -2.45
ITGB1-216ENST00000493758 DEFB130BP0DP73 79 aa-0.29□□□□□ -2.46
ITGB1-216ENST00000493758 DEFB130AP0DP74 79 aa-0.29□□□□□ -2.46
ITGB1-216ENST00000493758 CGREF1Q99674 301 aa-0.29□□□□□ -2.46
ITGB1-216ENST00000493758 TMEM262E9PQX1 116 aa-0.3□□□□□ -2.46
ITGB1-216ENST00000493758 H3BNG1 76 aa-0.3□□□□□ -2.46
ITGB1-216ENST00000493758 M0R1W7 72 aa-0.3□□□□□ -2.46
ITGB1-216ENST00000493758 GYPAP02724 150 aa-0.3□□□□□ -2.46
ITGB1-216ENST00000493758 A0A1B0GU69 56 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms