RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 MT1HP80294 61 aa3.75□□□□□ -1.81
PDLIM1-204ENST00000492511 SIGMAR1Q99720 223 aa3.75□□□□□ -1.81
PDLIM1-204ENST00000492511 LOC110117498A0A087WWA1 95 aa3.74□□□□□ -1.81
PDLIM1-204ENST00000492511 A0A1W2PPM0 123 aa3.74□□□□□ -1.81
PDLIM1-204ENST00000492511 JMJD7-PLA2G4BH0Y9G9 81 aa3.74□□□□□ -1.81
PDLIM1-204ENST00000492511 LINC00313P59037 77 aa3.74□□□□□ -1.81
PDLIM1-204ENST00000492511 ATP11AUNQ6ZP68 121 aa3.74□□□□□ -1.81
PDLIM1-204ENST00000492511 LYRM7Q5U5X0 104 aa3.73□□□□□ -1.81
PDLIM1-204ENST00000492511 C14orf132Q9NPU4 83 aa3.73□□□□□ -1.81
PDLIM1-204ENST00000492511 IGHV6-1A0A0B4J1U7 121 aa3.71□□□□□ -1.82
PDLIM1-204ENST00000492511 A0A1B0GVX0 72 aa3.71□□□□□ -1.82
PDLIM1-204ENST00000492511 MTURNQ8N3F0 131 aa3.71□□□□□ -1.82
PDLIM1-204ENST00000492511 A0A1B0GW54 56 aa3.7□□□□□ -1.82
PDLIM1-204ENST00000492511 H3BT86 120 aa3.7□□□□□ -1.82
PDLIM1-204ENST00000492511 PDE6GP18545 87 aa3.7□□□□□ -1.82
PDLIM1-204ENST00000492511 C21orf62-AS1Q17RA5 79 aa3.7□□□□□ -1.82
PDLIM1-204ENST00000492511 J3KT08 172 aa3.69□□□□□ -1.82
PDLIM1-204ENST00000492511 C8orf87E5RJ46 101 aa3.68□□□□□ -1.82
PDLIM1-204ENST00000492511 SPCS1Q9Y6A9 102 aa3.68□□□□□ -1.82
PDLIM1-204ENST00000492511 IGKV3D-7A0A0C4DH55 119 aa3.67□□□□□ -1.82
PDLIM1-204ENST00000492511 A8MWP4 228 aa3.67□□□□□ -1.82
PDLIM1-204ENST00000492511 LORP23490 312 aaPredicted RBP3.67□□□□□ -1.82
PDLIM1-204ENST00000492511 KRTAP10-6P60371 365 aaPredicted RBP3.67□□□□□ -1.82
PDLIM1-204ENST00000492511 COL5A1-AS1Q5SY13 56 aa3.67□□□□□ -1.82
PDLIM1-204ENST00000492511 M0R2T5 61 aa3.66□□□□□ -1.82
PDLIM1-204ENST00000492511 COX6B2Q6YFQ2 88 aa3.66□□□□□ -1.82
PDLIM1-204ENST00000492511 C8orf17Q9NRJ1 99 aa3.66□□□□□ -1.82
PDLIM1-204ENST00000492511 PRO0461Q9UI25 63 aa3.66□□□□□ -1.82
PDLIM1-204ENST00000492511 NREPQ16612 68 aa3.65□□□□□ -1.83
PDLIM1-204ENST00000492511 Q8N9P0 234 aaPredicted RBP3.65□□□□□ -1.83
PDLIM1-204ENST00000492511 MPLKIPQ8TAP9 179 aa3.65□□□□□ -1.83
PDLIM1-204ENST00000492511 K7EP34 96 aa3.64□□□□□ -1.83
PDLIM1-204ENST00000492511 NDUFB1O75438 58 aa3.64□□□□□ -1.83
PDLIM1-204ENST00000492511 HRES1P13985 223 aa3.64□□□□□ -1.83
PDLIM1-204ENST00000492511 PRR15Q8IV56 129 aa3.64□□□□□ -1.83
PDLIM1-204ENST00000492511 ZCCHC13Q8WW36 166 aaKnown RBP3.63□□□□□ -1.83
PDLIM1-204ENST00000492511 MMP24-AS1A0A0U1RRL7 71 aa3.62□□□□□ -1.83
PDLIM1-204ENST00000492511 PCP4L1A6NKN8 68 aa3.62□□□□□ -1.83
PDLIM1-204ENST00000492511 K7EQZ3 153 aa3.62□□□□□ -1.83
PDLIM1-204ENST00000492511 Q6ZVQ6 151 aa3.62□□□□□ -1.83
PDLIM1-204ENST00000492511 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.83
PDLIM1-204ENST00000492511 BPY2O14599 106 aa3.59□□□□□ -1.83
PDLIM1-204ENST00000492511 SPINK7P58062 85 aa3.59□□□□□ -1.83
PDLIM1-204ENST00000492511 TMEM254Q8TBM7 123 aa3.59□□□□□ -1.83
PDLIM1-204ENST00000492511 MRPL34Q9BQ48 92 aaKnown RBP3.59□□□□□ -1.83
PDLIM1-204ENST00000492511 LINC00846Q9NV44 126 aa3.59□□□□□ -1.83
PDLIM1-204ENST00000492511 hDV103S1A0JD37 113 aa3.58□□□□□ -1.84
PDLIM1-204ENST00000492511 Q8N9L7 120 aa3.58□□□□□ -1.84
PDLIM1-204ENST00000492511 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
PDLIM1-204ENST00000492511 GTF2H5Q6ZYL4 71 aa3.57□□□□□ -1.84
PDLIM1-204ENST00000492511 F8W1H4 67 aa3.56□□□□□ -1.84
PDLIM1-204ENST00000492511 RBM12B-AS1Q9P1G2 102 aa3.56□□□□□ -1.84
PDLIM1-204ENST00000492511 FAM236DA0A1B0GTK5 79 aa3.55□□□□□ -1.84
PDLIM1-204ENST00000492511 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
PDLIM1-204ENST00000492511 FAM236CP0DP71 79 aa3.55□□□□□ -1.84
PDLIM1-204ENST00000492511 ETDBQ3ZM63 59 aa3.55□□□□□ -1.84
PDLIM1-204ENST00000492511 Q5W150 140 aa3.55□□□□□ -1.84
PDLIM1-204ENST00000492511 WFDC13Q8IUB5 93 aa3.54□□□□□ -1.84
PDLIM1-204ENST00000492511 NDUFS5O43920 106 aa3.53□□□□□ -1.84
PDLIM1-204ENST00000492511 CASC2Q6XLA1 102 aa3.53□□□□□ -1.84
PDLIM1-204ENST00000492511 UBL5Q9BZL1 73 aa3.53□□□□□ -1.84
PDLIM1-204ENST00000492511 USH2AO75445 5202 aa3.53□□□□□ -1.84
PDLIM1-204ENST00000492511 HCG22E2RYF7 251 aa3.51□□□□□ -1.85
PDLIM1-204ENST00000492511 MT2AP02795 61 aa3.51□□□□□ -1.85
PDLIM1-204ENST00000492511 MT1FP04733 61 aa3.49□□□□□ -1.85
PDLIM1-204ENST00000492511 IGKV2D-30A0A075B6S6 120 aa3.48□□□□□ -1.85
PDLIM1-204ENST00000492511 LOC100996750A0A140TA64 210 aa3.48□□□□□ -1.85
PDLIM1-204ENST00000492511 IGKV2-30P06310 120 aa3.48□□□□□ -1.85
PDLIM1-204ENST00000492511 CXCL6P80162 114 aa3.48□□□□□ -1.85
PDLIM1-204ENST00000492511 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
PDLIM1-204ENST00000492511 SSPOA2VEC9 5147 aa3.48□□□□□ -1.85
PDLIM1-204ENST00000492511 C7orf65Q6ZTY9 151 aa3.46□□□□□ -1.86
PDLIM1-204ENST00000492511 KRTAP9-3Q9BYQ3 159 aa3.46□□□□□ -1.86
PDLIM1-204ENST00000492511 A0A1B0GV90 55 aa3.45□□□□□ -1.86
PDLIM1-204ENST00000492511 H1FX-AS1Q4G0G2 97 aa3.45□□□□□ -1.86
PDLIM1-204ENST00000492511 ACYP1P07311 99 aa3.44□□□□□ -1.86
PDLIM1-204ENST00000492511 KRTAP10-10P60014 251 aa3.44□□□□□ -1.86
PDLIM1-204ENST00000492511 C4orf26Q17RF5 130 aa3.44□□□□□ -1.86
PDLIM1-204ENST00000492511 KRTAP3-1Q9BYR8 98 aa3.44□□□□□ -1.86
PDLIM1-204ENST00000492511 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
PDLIM1-204ENST00000492511 FAM240AA0A1B0GVK7 77 aa3.43□□□□□ -1.86
PDLIM1-204ENST00000492511 TP53AIP1Q9HCN2 124 aa3.42□□□□□ -1.86
PDLIM1-204ENST00000492511 ATP5EP2Q5VTU8 51 aa3.39□□□□□ -1.87
PDLIM1-204ENST00000492511 KRTAP19-1Q8IUB9 90 aa3.38□□□□□ -1.87
PDLIM1-204ENST00000492511 CYP4F30PQ9H0H9 118 aa3.38□□□□□ -1.87
PDLIM1-204ENST00000492511 A0A087WVE0 104 aa3.37□□□□□ -1.87
PDLIM1-204ENST00000492511 HIST1H4AP62805 103 aaKnown RBP3.37□□□□□ -1.87
PDLIM1-204ENST00000492511 LINC00643Q86TS7 51 aa3.37□□□□□ -1.87
PDLIM1-204ENST00000492511 C1orf64Q8NEQ6 169 aa3.37□□□□□ -1.87
PDLIM1-204ENST00000492511 MACF1Q9UPN3 7388 aaKnown RBP3.36□□□□□ -1.87
PDLIM1-204ENST00000492511 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
PDLIM1-204ENST00000492511 TRAV22A0A0B4J277 110 aa3.35□□□□□ -1.87
PDLIM1-204ENST00000492511 UQCRQO14949 82 aa3.34□□□□□ -1.87
PDLIM1-204ENST00000492511 C5orf47Q569G3 176 aa3.34□□□□□ -1.87
PDLIM1-204ENST00000492511 LCA10Q71F78 164 aa3.34□□□□□ -1.87
PDLIM1-204ENST00000492511 LOC101927531A0A1B0GV80 90 aa3.33□□□□□ -1.88
PDLIM1-204ENST00000492511 S4R3F8 94 aa3.33□□□□□ -1.88
PDLIM1-204ENST00000492511 H0Y9P7 68 aa3.32□□□□□ -1.88
PDLIM1-204ENST00000492511 OCR1Q9BZK8 76 aa3.31□□□□□ -1.88
PDLIM1-204ENST00000492511 CSAG1Q6PB30 78 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms