RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 ANKRD29Q8N6D5 301 aa4.44□□□□□ -1.7
HDAC3-211ENST00000491581 IGHV6-1A0A0B4J1U7 121 aa4.43□□□□□ -1.7
HDAC3-211ENST00000491581 PSMB2P49721 201 aa4.43□□□□□ -1.7
HDAC3-211ENST00000491581 LINC00472Q9H8W2 130 aa4.43□□□□□ -1.7
HDAC3-211ENST00000491581 FAM236DA0A1B0GTK5 79 aa4.42□□□□□ -1.7
HDAC3-211ENST00000491581 CCKP06307 115 aa4.42□□□□□ -1.7
HDAC3-211ENST00000491581 FAM236CP0DP71 79 aa4.42□□□□□ -1.7
HDAC3-211ENST00000491581 VPS25Q9BRG1 176 aa4.42□□□□□ -1.7
HDAC3-211ENST00000491581 ORMDL1Q9P0S3 153 aa4.42□□□□□ -1.7
HDAC3-211ENST00000491581 TRBV20-1A0A075B6N2 111 aa4.41□□□□□ -1.7
HDAC3-211ENST00000491581 A0A1B0GX51 115 aa4.41□□□□□ -1.7
HDAC3-211ENST00000491581 MPLKIPQ8TAP9 179 aa4.41□□□□□ -1.7
HDAC3-211ENST00000491581 TRBV7-4A0A0J9YYF1 115 aa4.4□□□□□ -1.71
HDAC3-211ENST00000491581 TMEM238LA0A1B0GVL6 79 aa4.4□□□□□ -1.71
HDAC3-211ENST00000491581 SNCGO76070 127 aa4.4□□□□□ -1.71
HDAC3-211ENST00000491581 HSD52Q0P140 79 aa4.4□□□□□ -1.71
HDAC3-211ENST00000491581 DNAL4O96015 105 aa4.39□□□□□ -1.71
HDAC3-211ENST00000491581 TRACP01848 142 aa4.39□□□□□ -1.71
HDAC3-211ENST00000491581 NAA38Q9BRA0 125 aaKnown RBP4.39□□□□□ -1.71
HDAC3-211ENST00000491581 TMA7Q9Y2S6 64 aaKnown RBP4.39□□□□□ -1.71
HDAC3-211ENST00000491581 KRTAP10-10P60014 251 aa4.37□□□□□ -1.71
HDAC3-211ENST00000491581 A0A1B0GVX0 72 aa4.36□□□□□ -1.71
HDAC3-211ENST00000491581 TMEM256-PLSCR3K7ERE1 68 aa4.36□□□□□ -1.71
HDAC3-211ENST00000491581 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
HDAC3-211ENST00000491581 UBE2V1Q13404 147 aa4.34□□□□□ -1.71
HDAC3-211ENST00000491581 SCGB1C2P0DMR2 95 aa4.33□□□□□ -1.72
HDAC3-211ENST00000491581 SPINK7P58062 85 aa4.33□□□□□ -1.72
HDAC3-211ENST00000491581 RBM12B-AS1Q9P1G2 102 aa4.33□□□□□ -1.72
HDAC3-211ENST00000491581 COX6CP09669 75 aa4.32□□□□□ -1.72
HDAC3-211ENST00000491581 BAALC-AS2P0C853 105 aa4.32□□□□□ -1.72
HDAC3-211ENST00000491581 RBM3P98179 157 aaKnown RBP4.32□□□□□ -1.72
HDAC3-211ENST00000491581 ZCCHC13Q8WW36 166 aaKnown RBP4.32□□□□□ -1.72
HDAC3-211ENST00000491581 UQCR10Q9UDW1 63 aa4.32□□□□□ -1.72
HDAC3-211ENST00000491581 C8orf87E5RJ46 101 aa4.3□□□□□ -1.72
HDAC3-211ENST00000491581 Q6ZQT0 140 aa4.3□□□□□ -1.72
HDAC3-211ENST00000491581 DSCR8Q96T75 97 aa4.3□□□□□ -1.72
HDAC3-211ENST00000491581 IGKV3D-7A0A0C4DH55 119 aa4.29□□□□□ -1.72
HDAC3-211ENST00000491581 WFDC13Q8IUB5 93 aa4.29□□□□□ -1.72
HDAC3-211ENST00000491581 C9JAW5 83 aa4.28□□□□□ -1.72
HDAC3-211ENST00000491581 C8orf17Q9NRJ1 99 aa4.28□□□□□ -1.72
HDAC3-211ENST00000491581 Q8N9P0 234 aaPredicted RBP4.27□□□□□ -1.73
HDAC3-211ENST00000491581 C14orf132Q9NPU4 83 aa4.27□□□□□ -1.73
HDAC3-211ENST00000491581 H3BQ85 93 aa4.26□□□□□ -1.73
HDAC3-211ENST00000491581 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
HDAC3-211ENST00000491581 MTURNQ8N3F0 131 aa4.25□□□□□ -1.73
HDAC3-211ENST00000491581 A8MWP4 228 aa4.24□□□□□ -1.73
HDAC3-211ENST00000491581 LYRM7Q5U5X0 104 aa4.24□□□□□ -1.73
HDAC3-211ENST00000491581 SYNE2Q8WXH0 6885 aaKnown RBP4.23□□□□□ -1.73
HDAC3-211ENST00000491581 MMP24-AS1A0A0U1RRL7 71 aa4.23□□□□□ -1.73
HDAC3-211ENST00000491581 J3KT08 172 aa4.23□□□□□ -1.73
HDAC3-211ENST00000491581 Q6ZVQ6 151 aa4.23□□□□□ -1.73
HDAC3-211ENST00000491581 LOC110117498A0A087WWA1 95 aa4.22□□□□□ -1.73
HDAC3-211ENST00000491581 ATXN8Q156A1 80 aa4.22□□□□□ -1.73
HDAC3-211ENST00000491581 K7EQZ3 153 aa4.21□□□□□ -1.74
HDAC3-211ENST00000491581 NDUFB1O75438 58 aa4.21□□□□□ -1.74
HDAC3-211ENST00000491581 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
HDAC3-211ENST00000491581 BATFQ16520 125 aa4.2□□□□□ -1.74
HDAC3-211ENST00000491581 Q5W150 140 aa4.2□□□□□ -1.74
HDAC3-211ENST00000491581 PRR15Q8IV56 129 aa4.2□□□□□ -1.74
HDAC3-211ENST00000491581 Q8N9L7 120 aa4.19□□□□□ -1.74
HDAC3-211ENST00000491581 JMJD7-PLA2G4BH0Y9G9 81 aa4.18□□□□□ -1.74
HDAC3-211ENST00000491581 NDUFS5O43920 106 aa4.18□□□□□ -1.74
HDAC3-211ENST00000491581 MRPL34Q9BQ48 92 aaKnown RBP4.18□□□□□ -1.74
HDAC3-211ENST00000491581 IGKV2D-30A0A075B6S6 120 aa4.17□□□□□ -1.74
HDAC3-211ENST00000491581 H3BS24 57 aa4.17□□□□□ -1.74
HDAC3-211ENST00000491581 M0R143 59 aa4.17□□□□□ -1.74
HDAC3-211ENST00000491581 IGKV2-30P06310 120 aa4.17□□□□□ -1.74
HDAC3-211ENST00000491581 NREPQ16612 68 aa4.17□□□□□ -1.74
HDAC3-211ENST00000491581 TMEM254Q8TBM7 123 aa4.16□□□□□ -1.74
HDAC3-211ENST00000491581 hDV103S1A0JD37 113 aa4.15□□□□□ -1.75
HDAC3-211ENST00000491581 H1FX-AS1Q4G0G2 97 aa4.15□□□□□ -1.75
HDAC3-211ENST00000491581 BPY2O14599 106 aa4.14□□□□□ -1.75
HDAC3-211ENST00000491581 TAX1BP3O14907 124 aa4.13□□□□□ -1.75
HDAC3-211ENST00000491581 C4orf26Q17RF5 130 aa4.13□□□□□ -1.75
HDAC3-211ENST00000491581 C21orf62-AS1Q17RA5 79 aa4.12□□□□□ -1.75
HDAC3-211ENST00000491581 PDE6GP18545 87 aa4.11□□□□□ -1.75
HDAC3-211ENST00000491581 A0A1B0GW54 56 aa4.1□□□□□ -1.75
HDAC3-211ENST00000491581 HCG22E2RYF7 251 aa4.1□□□□□ -1.75
HDAC3-211ENST00000491581 KRTAP3-1Q9BYR8 98 aa4.1□□□□□ -1.75
HDAC3-211ENST00000491581 A0A1W2PPM0 123 aa4.09□□□□□ -1.75
HDAC3-211ENST00000491581 C9orf118A6NHY6 69 aa4.09□□□□□ -1.75
HDAC3-211ENST00000491581 SMIM6P0DI80 62 aa4.09□□□□□ -1.75
HDAC3-211ENST00000491581 C5orf47Q569G3 176 aa4.09□□□□□ -1.75
HDAC3-211ENST00000491581 CASC2Q6XLA1 102 aa4.08□□□□□ -1.76
HDAC3-211ENST00000491581 C7orf65Q6ZTY9 151 aa4.08□□□□□ -1.76
HDAC3-211ENST00000491581 H3BT86 120 aa4.07□□□□□ -1.76
HDAC3-211ENST00000491581 LOC105371267A0A1B0GV96 52 aa4.06□□□□□ -1.76
HDAC3-211ENST00000491581 TSTD3H0UI37 97 aa4.06□□□□□ -1.76
HDAC3-211ENST00000491581 MT1BP07438 61 aa4.06□□□□□ -1.76
HDAC3-211ENST00000491581 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
HDAC3-211ENST00000491581 LINC00846Q9NV44 126 aa4.04□□□□□ -1.76
HDAC3-211ENST00000491581 SPCS1Q9Y6A9 102 aa4.03□□□□□ -1.76
HDAC3-211ENST00000491581 A0A087WVE0 104 aa4.02□□□□□ -1.77
HDAC3-211ENST00000491581 LCA10Q71F78 164 aa4.02□□□□□ -1.77
HDAC3-211ENST00000491581 FAM236AA0A1B0GUQ0 79 aa4.01□□□□□ -1.77
HDAC3-211ENST00000491581 FAM236BA0A1B0GV22 79 aa4.01□□□□□ -1.77
HDAC3-211ENST00000491581 PRO0461Q9UI25 63 aa4.01□□□□□ -1.77
HDAC3-211ENST00000491581 C1orf64Q8NEQ6 169 aa3.99□□□□□ -1.77
HDAC3-211ENST00000491581 S4R3F8 94 aa3.99□□□□□ -1.77
HDAC3-211ENST00000491581 A6NN06 94 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms